RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 VAV3Q9UKW4 847 aa19.83■□□□□ 0.77
COL6A1-204ENST00000486023 LRFN2Q9ULH4 789 aa19.83■□□□□ 0.77
COL6A1-204ENST00000486023 PTPRSQ13332 1948 aa19.82■□□□□ 0.76
COL6A1-204ENST00000486023 KDM3AQ9Y4C1 1321 aa19.82■□□□□ 0.76
COL6A1-204ENST00000486023 GPR182O15218 404 aa19.82■□□□□ 0.76
COL6A1-204ENST00000486023 LPXNO60711 386 aa19.82■□□□□ 0.76
COL6A1-204ENST00000486023 GPR32O75388 356 aa19.82■□□□□ 0.76
COL6A1-204ENST00000486023 BTG3Q14201 252 aaPredicted RBP19.82■□□□□ 0.76
COL6A1-204ENST00000486023 PAN2Q504Q3 1202 aaKnown RBP19.82■□□□□ 0.76
COL6A1-204ENST00000486023 EPC2Q52LR7 807 aa19.82■□□□□ 0.76
COL6A1-204ENST00000486023 PLA2G4FQ68DD2 849 aa19.82■□□□□ 0.76
COL6A1-204ENST00000486023 ADAM2Q99965 735 aa19.82■□□□□ 0.76
COL6A1-204ENST00000486023 ERVK-5Q9HDB9 667 aa19.82■□□□□ 0.76
COL6A1-204ENST00000486023 RGL1Q9NZL6 768 aa19.82■□□□□ 0.76
COL6A1-204ENST00000486023 MGEA5O60502 916 aa19.81■□□□□ 0.76
COL6A1-204ENST00000486023 CSPG5O95196 566 aa19.81■□□□□ 0.76
COL6A1-204ENST00000486023 TXKP42681 527 aa19.81■□□□□ 0.76
COL6A1-204ENST00000486023 QARSP47897 775 aaKnown RBP19.81■□□□□ 0.76
COL6A1-204ENST00000486023 RBM25P49756 843 aaKnown RBP19.81■□□□□ 0.76
COL6A1-204ENST00000486023 CYP4A11Q02928 519 aa19.81■□□□□ 0.76
COL6A1-204ENST00000486023 PPP2R5CQ13362 524 aa19.81■□□□□ 0.76
COL6A1-204ENST00000486023 DRP2Q13474 957 aa19.81■□□□□ 0.76
COL6A1-204ENST00000486023 CTTNQ14247 550 aaKnown RBP19.81■□□□□ 0.76
COL6A1-204ENST00000486023 CALCRLQ16602 461 aa19.81■□□□□ 0.76
COL6A1-204ENST00000486023 TPH2Q8IWU9 490 aa19.81■□□□□ 0.76
COL6A1-204ENST00000486023 TMEM192Q8IY95 271 aa19.81■□□□□ 0.76
COL6A1-204ENST00000486023 SLFN12Q8IYM2 578 aa19.81■□□□□ 0.76
COL6A1-204ENST00000486023 SP7Q8TDD2 431 aaPredicted RBP19.81■□□□□ 0.76
COL6A1-204ENST00000486023 NLRP7Q8WX94 980 aa19.81■□□□□ 0.76
COL6A1-204ENST00000486023 DYDC2Q96IM9 177 aa19.81■□□□□ 0.76
COL6A1-204ENST00000486023 LLPHQ9BRT6 129 aaKnown RBP19.81■□□□□ 0.76
COL6A1-204ENST00000486023 NIFKQ9BYG3 293 aaKnown RBP19.81■□□□□ 0.76
COL6A1-204ENST00000486023 SH2B1Q9NRF2 756 aaPredicted RBP19.81■□□□□ 0.76
COL6A1-204ENST00000486023 BMP2KQ9NSY1 1161 aaPredicted RBP19.81■□□□□ 0.76
COL6A1-204ENST00000486023 PCDHA12Q9UN75 941 aa19.81■□□□□ 0.76
COL6A1-204ENST00000486023 WNT7AO00755 349 aa19.8■□□□□ 0.76
COL6A1-204ENST00000486023 TBX3O15119 743 aa19.8■□□□□ 0.76
COL6A1-204ENST00000486023 ST18O60284 1047 aa19.8■□□□□ 0.76
COL6A1-204ENST00000486023 CSDE1O75534 798 aaKnown RBP19.8■□□□□ 0.76
COL6A1-204ENST00000486023 STBD1O95210 358 aa19.8■□□□□ 0.76
COL6A1-204ENST00000486023 P4HBP07237 508 aaKnown RBP19.8■□□□□ 0.76
COL6A1-204ENST00000486023 STAG3L1P0CL83 205 aa19.8■□□□□ 0.76
COL6A1-204ENST00000486023 FGFR4P22455 802 aa19.8■□□□□ 0.76
COL6A1-204ENST00000486023 CTNNB1P35222 781 aa19.8■□□□□ 0.76
COL6A1-204ENST00000486023 GATMP50440 423 aa19.8■□□□□ 0.76
COL6A1-204ENST00000486023 DNM2P50570 870 aa19.8■□□□□ 0.76
COL6A1-204ENST00000486023 NPEPPSP55786 919 aa19.8■□□□□ 0.76
COL6A1-204ENST00000486023 GPM6BQ13491 265 aa19.8■□□□□ 0.76
COL6A1-204ENST00000486023 RABEP1Q15276 862 aa19.8■□□□□ 0.76
COL6A1-204ENST00000486023 EPHA7Q15375 998 aa19.8■□□□□ 0.76
COL6A1-204ENST00000486023 ODR4Q5SWX8 454 aa19.8■□□□□ 0.76
COL6A1-204ENST00000486023 ANO5Q75V66 913 aa19.8■□□□□ 0.76
COL6A1-204ENST00000486023 FAM228AQ86W67 206 aa19.8■□□□□ 0.76
COL6A1-204ENST00000486023 THEGQ9P2T0 379 aa19.8■□□□□ 0.76
COL6A1-204ENST00000486023 PCDHB7Q9Y5E2 793 aa19.8■□□□□ 0.76
COL6A1-204ENST00000486023 NEMFO60524 1076 aa19.79■□□□□ 0.76
COL6A1-204ENST00000486023 DKC1O60832 514 aaKnown RBP eCLIP19.79■□□□□ 0.76
COL6A1-204ENST00000486023 DGKIO75912 1065 aa19.79■□□□□ 0.76
COL6A1-204ENST00000486023 MCM7P33993 719 aa19.79■□□□□ 0.76
COL6A1-204ENST00000486023 HMGN5P82970 282 aaKnown RBP19.79■□□□□ 0.76
COL6A1-204ENST00000486023 TARBP2Q15633 366 aaKnown RBP19.79■□□□□ 0.76
COL6A1-204ENST00000486023 NPAS4Q8IUM7 802 aa19.79■□□□□ 0.76
COL6A1-204ENST00000486023 ZNF579Q8NAF0 562 aaKnown RBP19.79■□□□□ 0.76
COL6A1-204ENST00000486023 CEP170P1Q96L14 293 aa19.79■□□□□ 0.76
COL6A1-204ENST00000486023 LXNQ9BS40 222 aa19.79■□□□□ 0.76
COL6A1-204ENST00000486023 COL25A1Q9BXS0 654 aaPredicted RBP19.79■□□□□ 0.76
COL6A1-204ENST00000486023 ADAMTS10Q9H324 1103 aa19.79■□□□□ 0.76
COL6A1-204ENST00000486023 SUCLA2Q9P2R7 463 aaPredicted RBP19.79■□□□□ 0.76
COL6A1-204ENST00000486023 WRAP73Q9P2S5 460 aaPredicted RBP19.79■□□□□ 0.76
COL6A1-204ENST00000486023 MICAL3Q7RTP6 2002 aa19.79■□□□□ 0.76
COL6A1-204ENST00000486023 ADGRA3Q8IWK6 1321 aa19.78■□□□□ 0.76
COL6A1-204ENST00000486023 POU3F3P20264 500 aaPredicted RBP19.78■□□□□ 0.76
COL6A1-204ENST00000486023 GPC3P51654 580 aa19.78■□□□□ 0.76
COL6A1-204ENST00000486023 TFF2Q03403 129 aa19.78■□□□□ 0.76
COL6A1-204ENST00000486023 ZNF174Q15697 407 aa19.78■□□□□ 0.76
COL6A1-204ENST00000486023 RHPN2Q8IUC4 686 aa19.78■□□□□ 0.76
COL6A1-204ENST00000486023 LINC01465Q8N7H1 131 aa19.78■□□□□ 0.76
COL6A1-204ENST00000486023 SAMD11Q96NU1 681 aa19.78■□□□□ 0.76
COL6A1-204ENST00000486023 TTC12Q9H892 705 aaPredicted RBP19.78■□□□□ 0.76
COL6A1-204ENST00000486023 CYP26B1Q9NR63 512 aa19.78■□□□□ 0.76
COL6A1-204ENST00000486023 TRANK1O15050 2925 aa19.78■□□□□ 0.76
COL6A1-204ENST00000486023 ZBTB39O15060 712 aa19.77■□□□□ 0.76
COL6A1-204ENST00000486023 MAFO75444 373 aaPredicted RBP19.77■□□□□ 0.76
COL6A1-204ENST00000486023 ZSCAN20P17040 1043 aaPredicted RBP19.77■□□□□ 0.76
COL6A1-204ENST00000486023 EIF4BP23588 611 aaKnown RBP19.77■□□□□ 0.76
COL6A1-204ENST00000486023 YWHABP31946 246 aaKnown RBP19.77■□□□□ 0.76
COL6A1-204ENST00000486023 SARSP49591 514 aaKnown RBP19.77■□□□□ 0.76
COL6A1-204ENST00000486023 POLGP54098 1239 aaPredicted RBP19.77■□□□□ 0.76
COL6A1-204ENST00000486023 SPOUT1Q5T280 376 aaKnown RBP19.77■□□□□ 0.76
COL6A1-204ENST00000486023 KSR1Q8IVT5 923 aa19.77■□□□□ 0.76
COL6A1-204ENST00000486023 RNF169Q8NCN4 708 aa19.77■□□□□ 0.76
COL6A1-204ENST00000486023 IL27Q8NEV9 243 aa19.77■□□□□ 0.76
COL6A1-204ENST00000486023 RGS18Q9NS28 235 aa19.77■□□□□ 0.76
COL6A1-204ENST00000486023 A0A087WWV3 80 aa19.76■□□□□ 0.75
COL6A1-204ENST00000486023 A0A087WZ62 844 aa19.76■□□□□ 0.75
COL6A1-204ENST00000486023 BMPR1AP36894 532 aa19.76■□□□□ 0.75
COL6A1-204ENST00000486023 XKR9Q5GH70 373 aa19.76■□□□□ 0.75
COL6A1-204ENST00000486023 FAM102BQ5T8I3 360 aa19.76■□□□□ 0.75
COL6A1-204ENST00000486023 SLC24A5Q71RS6 500 aa19.76■□□□□ 0.75
COL6A1-204ENST00000486023 OTUD6AQ7L8S5 288 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms