RNA–Protein interactions for RNA: ENST00000485870.1

COL1A1-206, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 403 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-206ENST00000485870 RPS6KA5O75582 802 aa20.66■□□□□ 0.9
COL1A1-206ENST00000485870 TXKP42681 527 aa20.66■□□□□ 0.9
COL1A1-206ENST00000485870 MCM2P49736 904 aa20.66■□□□□ 0.9
COL1A1-206ENST00000485870 CRYBB1P53674 252 aaPredicted RBP20.66■□□□□ 0.9
COL1A1-206ENST00000485870 HTRA4P83105 476 aaPredicted RBP20.66■□□□□ 0.9
COL1A1-206ENST00000485870 NFX1Q12986 1120 aaKnown RBP20.66■□□□□ 0.9
COL1A1-206ENST00000485870 LINC01599Q8WXQ3 324 aa20.66■□□□□ 0.9
COL1A1-206ENST00000485870 DYDC2Q96IM9 177 aa20.66■□□□□ 0.9
COL1A1-206ENST00000485870 ZNF668Q96K58 619 aaPredicted RBP20.66■□□□□ 0.9
COL1A1-206ENST00000485870 LXNQ9BS40 222 aa20.66■□□□□ 0.9
COL1A1-206ENST00000485870 BACH2Q9BYV9 841 aa20.66■□□□□ 0.9
COL1A1-206ENST00000485870 RGL1Q9NZL6 768 aa20.66■□□□□ 0.9
COL1A1-206ENST00000485870 WRAP73Q9P2S5 460 aaPredicted RBP20.66■□□□□ 0.9
COL1A1-206ENST00000485870 MTUS1Q9ULD2 1270 aa20.66■□□□□ 0.9
COL1A1-206ENST00000485870 PCDHA12Q9UN75 941 aa20.66■□□□□ 0.9
COL1A1-206ENST00000485870 NOC2LQ9Y3T9 749 aaKnown RBP20.66■□□□□ 0.9
COL1A1-206ENST00000485870 LINC01553A4QN01 128 aa20.65■□□□□ 0.9
COL1A1-206ENST00000485870 DKC1O60832 514 aaKnown RBP eCLIP20.65■□□□□ 0.9
COL1A1-206ENST00000485870 GPR32O75388 356 aa20.65■□□□□ 0.9
COL1A1-206ENST00000485870 NLRP11P59045 1033 aaKnown RBP20.65■□□□□ 0.9
COL1A1-206ENST00000485870 CYP4A11Q02928 519 aa20.65■□□□□ 0.9
COL1A1-206ENST00000485870 ANO5Q75V66 913 aa20.65■□□□□ 0.9
COL1A1-206ENST00000485870 NOSTRINQ8IVI9 506 aa20.65■□□□□ 0.9
COL1A1-206ENST00000485870 SLC17A8Q8NDX2 589 aa20.65■□□□□ 0.9
COL1A1-206ENST00000485870 CEP89Q96ST8 783 aa20.65■□□□□ 0.9
COL1A1-206ENST00000485870 FTHL17Q9BXU8 183 aa20.65■□□□□ 0.9
COL1A1-206ENST00000485870 TMEM60Q9H2L4 133 aa20.65■□□□□ 0.9
COL1A1-206ENST00000485870 TTC12Q9H892 705 aaPredicted RBP20.65■□□□□ 0.9
COL1A1-206ENST00000485870 ERVK-5Q9HDB9 667 aa20.65■□□□□ 0.9
COL1A1-206ENST00000485870 KIF3AQ9Y496 699 aa20.65■□□□□ 0.9
COL1A1-206ENST00000485870 PRUNE2Q8WUY3 3088 aa20.65■□□□□ 0.9
COL1A1-206ENST00000485870 TTC3P53804 2025 aa20.65■□□□□ 0.9
COL1A1-206ENST00000485870 NPEPPSP55786 919 aa20.64■□□□□ 0.89
COL1A1-206ENST00000485870 CTTNQ14247 550 aaKnown RBP20.64■□□□□ 0.89
COL1A1-206ENST00000485870 ZNF174Q15697 407 aa20.64■□□□□ 0.89
COL1A1-206ENST00000485870 RTN4RL1Q86UN2 441 aaPredicted RBP20.64■□□□□ 0.89
COL1A1-206ENST00000485870 PPM1EQ8WY54 764 aa20.64■□□□□ 0.89
COL1A1-206ENST00000485870 SCLT1Q96NL6 688 aa20.64■□□□□ 0.89
COL1A1-206ENST00000485870 MTMR9Q96QG7 549 aa20.64■□□□□ 0.89
COL1A1-206ENST00000485870 TGS1Q96RS0 853 aaKnown RBP20.64■□□□□ 0.89
COL1A1-206ENST00000485870 TMX1Q9H3N1 280 aa20.64■□□□□ 0.89
COL1A1-206ENST00000485870 IBSPP21815 317 aaPredicted RBP20.63■□□□□ 0.89
COL1A1-206ENST00000485870 GJB2P29033 226 aa20.63■□□□□ 0.89
COL1A1-206ENST00000485870 DRP2Q13474 957 aa20.63■□□□□ 0.89
COL1A1-206ENST00000485870 TTC38Q5R3I4 469 aa20.63■□□□□ 0.89
COL1A1-206ENST00000485870 FAM228AQ86W67 206 aa20.63■□□□□ 0.89
COL1A1-206ENST00000485870 TPH2Q8IWU9 490 aa20.63■□□□□ 0.89
COL1A1-206ENST00000485870 SP7Q8TDD2 431 aaPredicted RBP20.63■□□□□ 0.89
COL1A1-206ENST00000485870 EIF2AK1Q9BQI3 630 aaKnown RBP20.63■□□□□ 0.89
COL1A1-206ENST00000485870 ADAMTS10Q9H324 1103 aa20.63■□□□□ 0.89
COL1A1-206ENST00000485870 CYP26B1Q9NR63 512 aa20.63■□□□□ 0.89
COL1A1-206ENST00000485870 ST3GAL5Q9UNP4 418 aa20.63■□□□□ 0.89
COL1A1-206ENST00000485870 GPR182O15218 404 aa20.62■□□□□ 0.89
COL1A1-206ENST00000485870 GPC3P51654 580 aa20.62■□□□□ 0.89
COL1A1-206ENST00000485870 ODR4Q5SWX8 454 aa20.62■□□□□ 0.89
COL1A1-206ENST00000485870 C4orf19Q8IY42 314 aa20.62■□□□□ 0.89
COL1A1-206ENST00000485870 MICALL1Q8N3F8 863 aa20.62■□□□□ 0.89
COL1A1-206ENST00000485870 ZNF579Q8NAF0 562 aaKnown RBP20.62■□□□□ 0.89
COL1A1-206ENST00000485870 GDPD5Q8WTR4 605 aa20.62■□□□□ 0.89
COL1A1-206ENST00000485870 NLRP7Q8WX94 980 aa20.62■□□□□ 0.89
COL1A1-206ENST00000485870 CEP170P1Q96L14 293 aa20.62■□□□□ 0.89
COL1A1-206ENST00000485870 C17orf80Q9BSJ5 609 aa20.62■□□□□ 0.89
COL1A1-206ENST00000485870 TSPYL2Q9H2G4 693 aaPredicted RBP20.62■□□□□ 0.89
COL1A1-206ENST00000485870 ZSWIM4Q9H7M6 989 aa20.62■□□□□ 0.89
COL1A1-206ENST00000485870 NOL7Q9UMY1 257 aaKnown RBP20.62■□□□□ 0.89
COL1A1-206ENST00000485870 TRANK1O15050 2925 aa20.62■□□□□ 0.89
COL1A1-206ENST00000485870 PRRC2BQ5JSZ5 2229 aaKnown RBP20.62■□□□□ 0.89
COL1A1-206ENST00000485870 COL4A4P53420 1690 aaPredicted RBP20.61■□□□□ 0.89
COL1A1-206ENST00000485870 IGKV6-21A0A0C4DH24 114 aa20.61■□□□□ 0.89
COL1A1-206ENST00000485870 POTEMA6NI47 508 aa20.61■□□□□ 0.89
COL1A1-206ENST00000485870 MGEA5O60502 916 aa20.61■□□□□ 0.89
COL1A1-206ENST00000485870 MAFO75444 373 aaPredicted RBP20.61■□□□□ 0.89
COL1A1-206ENST00000485870 SLITRK3O94933 977 aa20.61■□□□□ 0.89
COL1A1-206ENST00000485870 U2AF2P26368 475 aaKnown RBP eCLIP20.61■□□□□ 0.89
COL1A1-206ENST00000485870 YWHABP31946 246 aaKnown RBP20.61■□□□□ 0.89
COL1A1-206ENST00000485870 DNM2P50570 870 aa20.61■□□□□ 0.89
COL1A1-206ENST00000485870 ERVK-21P61565 698 aa20.61■□□□□ 0.89
COL1A1-206ENST00000485870 NBR1Q14596 966 aa20.61■□□□□ 0.89
COL1A1-206ENST00000485870 CCDC85BQ15834 202 aaPredicted RBP20.61■□□□□ 0.89
COL1A1-206ENST00000485870 BMP2KQ9NSY1 1161 aaPredicted RBP20.61■□□□□ 0.89
COL1A1-206ENST00000485870 SMC3Q9UQE7 1217 aa20.61■□□□□ 0.89
COL1A1-206ENST00000485870 UNC80Q8N2C7 3258 aa20.6■□□□□ 0.89
COL1A1-206ENST00000485870 DENND3A2RUS2 1198 aa20.6■□□□□ 0.89
COL1A1-206ENST00000485870 ZBTB39O15060 712 aa20.6■□□□□ 0.89
COL1A1-206ENST00000485870 OR52Z1P0C646 297 aa20.6■□□□□ 0.89
COL1A1-206ENST00000485870 TRAPPC10P48553 1259 aa20.6■□□□□ 0.89
COL1A1-206ENST00000485870 GRB10Q13322 594 aa20.6■□□□□ 0.89
COL1A1-206ENST00000485870 ORC2Q13416 577 aaPredicted RBP20.6■□□□□ 0.89
COL1A1-206ENST00000485870 XKR9Q5GH70 373 aa20.6■□□□□ 0.89
COL1A1-206ENST00000485870 MCTP1Q6DN14 999 aa20.6■□□□□ 0.89
COL1A1-206ENST00000485870 OTUD6AQ7L8S5 288 aa20.6■□□□□ 0.89
COL1A1-206ENST00000485870 NPAS4Q8IUM7 802 aa20.6■□□□□ 0.89
COL1A1-206ENST00000485870 ZNF710Q8N1W2 664 aa20.6■□□□□ 0.89
COL1A1-206ENST00000485870 ADAM2Q99965 735 aa20.6■□□□□ 0.89
COL1A1-206ENST00000485870 JPH2Q9BR39 696 aaPredicted RBP20.6■□□□□ 0.89
COL1A1-206ENST00000485870 SUCLA2Q9P2R7 463 aaPredicted RBP20.6■□□□□ 0.89
COL1A1-206ENST00000485870 GTPBP6O43824 516 aaPredicted RBP20.59■□□□□ 0.89
COL1A1-206ENST00000485870 EIF4BP23588 611 aaKnown RBP20.59■□□□□ 0.89
COL1A1-206ENST00000485870 POLGP54098 1239 aaPredicted RBP20.59■□□□□ 0.89
COL1A1-206ENST00000485870 RHPN2Q8IUC4 686 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms