RNA–Protein interactions for RNA: ENST00000483544.1

LINC00477-201, long intergenic non-protein coding RNA 477, humanhuman

TSL 2 BASIC

Gene LINC00477, Length 1,710 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477-201ENST00000483544 PDXKO00764 312 aa13.58□□□□□ -0.24
LINC00477-201ENST00000483544 MEIS2O14770 477 aa13.58□□□□□ -0.24
LINC00477-201ENST00000483544 SLC16A3O15427 465 aaKnown RBP13.58□□□□□ -0.24
LINC00477-201ENST00000483544 KRT18P05783 430 aaKnown RBP13.58□□□□□ -0.24
LINC00477-201ENST00000483544 RPL13P26373 211 aaKnown RBP13.58□□□□□ -0.24
LINC00477-201ENST00000483544 GBP2P32456 591 aaPredicted RBP13.58□□□□□ -0.24
LINC00477-201ENST00000483544 SLC16A2P36021 539 aa13.58□□□□□ -0.24
LINC00477-201ENST00000483544 EPS15P42566 896 aa13.58□□□□□ -0.24
LINC00477-201ENST00000483544 SCNN1DP51172 638 aa13.58□□□□□ -0.24
LINC00477-201ENST00000483544 NFIL3Q16649 462 aa13.58□□□□□ -0.24
LINC00477-201ENST00000483544 IFI16Q16666 785 aaKnown RBP13.58□□□□□ -0.24
LINC00477-201ENST00000483544 BMT2Q1RMZ1 405 aa13.58□□□□□ -0.24
LINC00477-201ENST00000483544 FAM83BQ5T0W9 1011 aa13.58□□□□□ -0.24
LINC00477-201ENST00000483544 SYDE2Q5VT97 1194 aa13.58□□□□□ -0.24
LINC00477-201ENST00000483544 HGSNATQ68CP4 663 aa13.58□□□□□ -0.24
LINC00477-201ENST00000483544 MIS18BP1Q6P0N0 1132 aa13.58□□□□□ -0.24
LINC00477-201ENST00000483544 KRT27Q7Z3Y8 459 aa13.58□□□□□ -0.24
LINC00477-201ENST00000483544 PCDHGC5Q9Y5F6 944 aa13.58□□□□□ -0.24
LINC00477-201ENST00000483544 PSME4Q14997 1843 aa13.58□□□□□ -0.24
LINC00477-201ENST00000483544 EPHB6O15197 1021 aa13.57□□□□□ -0.24
LINC00477-201ENST00000483544 MEFVO15553 781 aaPredicted RBP13.57□□□□□ -0.24
LINC00477-201ENST00000483544 UBE4BO95155 1302 aa13.57□□□□□ -0.24
LINC00477-201ENST00000483544 SSBP05455 408 aaKnown RBP eCLIP13.57□□□□□ -0.24
LINC00477-201ENST00000483544 SPIRE1Q08AE8 756 aa13.57□□□□□ -0.24
LINC00477-201ENST00000483544 NNTQ13423 1086 aa13.57□□□□□ -0.24
LINC00477-201ENST00000483544 SLC18A3Q16572 532 aa13.57□□□□□ -0.24
LINC00477-201ENST00000483544 DOK7Q18PE1 504 aa13.57□□□□□ -0.24
LINC00477-201ENST00000483544 TDRD12Q587J7 1177 aaKnown RBP13.57□□□□□ -0.24
LINC00477-201ENST00000483544 CCDC181Q5TID7 509 aa13.57□□□□□ -0.24
LINC00477-201ENST00000483544 SCFD1Q8WVM8 642 aa13.57□□□□□ -0.24
LINC00477-201ENST00000483544 LSM14BQ9BX40 385 aaKnown RBP13.57□□□□□ -0.24
LINC00477-201ENST00000483544 DNAJC18Q9H819 358 aa13.57□□□□□ -0.24
LINC00477-201ENST00000483544 EHMT1Q9H9B1 1298 aa13.57□□□□□ -0.24
LINC00477-201ENST00000483544 POTEB3A0JP26 581 aa13.56□□□□□ -0.24
LINC00477-201ENST00000483544 GTPBP10A4D1E9 387 aaKnown RBP13.56□□□□□ -0.24
LINC00477-201ENST00000483544 POTECB2RU33 542 aa13.56□□□□□ -0.24
LINC00477-201ENST00000483544 E9PMD0 336 aa13.56□□□□□ -0.24
LINC00477-201ENST00000483544 PLSCR1O15162 318 aa13.56□□□□□ -0.24
LINC00477-201ENST00000483544 SMNDC1O75940 238 aaKnown RBP eCLIP13.56□□□□□ -0.24
LINC00477-201ENST00000483544 ECM2O94769 699 aaPredicted RBP13.56□□□□□ -0.24
LINC00477-201ENST00000483544 GFPT2O94808 682 aa13.56□□□□□ -0.24
LINC00477-201ENST00000483544 NOL4O94818 638 aa13.56□□□□□ -0.24
LINC00477-201ENST00000483544 PRPF6O94906 941 aaKnown RBP13.56□□□□□ -0.24
LINC00477-201ENST00000483544 PLEKP08567 350 aaPredicted RBP13.56□□□□□ -0.24
LINC00477-201ENST00000483544 CCT5P48643 541 aa13.56□□□□□ -0.24
LINC00477-201ENST00000483544 PAPOLAP51003 745 aaKnown RBP13.56□□□□□ -0.24
LINC00477-201ENST00000483544 ADAM9Q13443 819 aa13.56□□□□□ -0.24
LINC00477-201ENST00000483544 LRRC41Q15345 812 aa13.56□□□□□ -0.24
LINC00477-201ENST00000483544 NAB2Q15742 525 aa13.56□□□□□ -0.24
LINC00477-201ENST00000483544 ASIC2Q16515 512 aa13.56□□□□□ -0.24
LINC00477-201ENST00000483544 KNOP1Q1ED39 458 aaKnown RBP13.56□□□□□ -0.24
LINC00477-201ENST00000483544 ABCB5Q2M3G0 1257 aa13.56□□□□□ -0.24
LINC00477-201ENST00000483544 LRRC23Q53EV4 343 aaPredicted RBP13.56□□□□□ -0.24
LINC00477-201ENST00000483544 POTEBQ6S5H4 581 aa13.56□□□□□ -0.24
LINC00477-201ENST00000483544 EPM2AIP1Q7L775 607 aaPredicted RBP13.56□□□□□ -0.24
LINC00477-201ENST00000483544 CLEC10AQ8IUN9 316 aa13.56□□□□□ -0.24
LINC00477-201ENST00000483544 OGFOD1Q8N543 542 aa13.56□□□□□ -0.24
LINC00477-201ENST00000483544 EEF2KMTQ96G04 330 aa13.56□□□□□ -0.24
LINC00477-201ENST00000483544 CAPZA3Q96KX2 299 aa13.56□□□□□ -0.24
LINC00477-201ENST00000483544 EPAS1Q99814 870 aa13.56□□□□□ -0.24
LINC00477-201ENST00000483544 MMADHCQ9H3L0 296 aaPredicted RBP13.56□□□□□ -0.24
LINC00477-201ENST00000483544 ACTR5Q9H9F9 607 aaPredicted RBP13.56□□□□□ -0.24
LINC00477-201ENST00000483544 TUFT1Q9NNX1 390 aa13.56□□□□□ -0.24
LINC00477-201ENST00000483544 FAM198AQ9UFP1 575 aa13.56□□□□□ -0.24
LINC00477-201ENST00000483544 HPCAL4Q9UM19 191 aa13.56□□□□□ -0.24
LINC00477-201ENST00000483544 USP17L15C9J2P7 530 aa13.56□□□□□ -0.24
LINC00477-201ENST00000483544 USP17L13C9JLJ4 530 aa13.56□□□□□ -0.24
LINC00477-201ENST00000483544 USP17L11C9JVI0 530 aa13.56□□□□□ -0.24
LINC00477-201ENST00000483544 USP17L18D6R9N7 530 aa13.56□□□□□ -0.24
LINC00477-201ENST00000483544 USP17L22D6RA61 530 aa13.56□□□□□ -0.24
LINC00477-201ENST00000483544 USP17L17D6RBQ6 530 aa13.56□□□□□ -0.24
LINC00477-201ENST00000483544 USP17L19D6RCP7 530 aa13.56□□□□□ -0.24
LINC00477-201ENST00000483544 USP17L20D6RJB6 530 aa13.56□□□□□ -0.24
LINC00477-201ENST00000483544 F5H6K3 240 aa13.56□□□□□ -0.24
LINC00477-201ENST00000483544 EIF3DO15371 548 aaKnown RBP eCLIP13.56□□□□□ -0.24
LINC00477-201ENST00000483544 SRGAP2O75044 1071 aa13.56□□□□□ -0.24
LINC00477-201ENST00000483544 MED24O75448 989 aa13.56□□□□□ -0.24
LINC00477-201ENST00000483544 MOCS3O95396 460 aa13.56□□□□□ -0.24
LINC00477-201ENST00000483544 EYA4O95677 639 aa13.56□□□□□ -0.24
LINC00477-201ENST00000483544 KLRC3Q07444 240 aa13.56□□□□□ -0.24
LINC00477-201ENST00000483544 ACTN3Q08043 901 aaPredicted RBP13.56□□□□□ -0.24
LINC00477-201ENST00000483544 USP17L24Q0WX57 530 aa13.56□□□□□ -0.24
LINC00477-201ENST00000483544 NFIAQ12857 509 aa13.56□□□□□ -0.24
LINC00477-201ENST00000483544 GIT2Q14161 759 aa13.56□□□□□ -0.24
LINC00477-201ENST00000483544 SLC15A2Q16348 729 aa13.56□□□□□ -0.24
LINC00477-201ENST00000483544 CFAP221Q4G0U5 840 aa13.56□□□□□ -0.24
LINC00477-201ENST00000483544 DACT2Q5SW24 774 aa13.56□□□□□ -0.24
LINC00477-201ENST00000483544 EMBQ6PCB8 327 aa13.56□□□□□ -0.24
LINC00477-201ENST00000483544 USP17L6PQ6QN14 398 aa13.56□□□□□ -0.24
LINC00477-201ENST00000483544 KRT26Q7Z3Y9 468 aa13.56□□□□□ -0.24
LINC00477-201ENST00000483544 SUPT20HQ8NEM7 779 aa13.56□□□□□ -0.24
LINC00477-201ENST00000483544 SPATA4Q8NEY3 305 aa13.56□□□□□ -0.24
LINC00477-201ENST00000483544 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.56□□□□□ -0.24
LINC00477-201ENST00000483544 CCDC102AQ96A19 550 aa13.56□□□□□ -0.24
LINC00477-201ENST00000483544 CCDC114Q96M63 670 aa13.56□□□□□ -0.24
LINC00477-201ENST00000483544 GANQ9H2C0 597 aa13.56□□□□□ -0.24
LINC00477-201ENST00000483544 TYW1Q9NV66 732 aaKnown RBP13.56□□□□□ -0.24
LINC00477-201ENST00000483544 SEL1LQ9UBV2 794 aa13.56□□□□□ -0.24
LINC00477-201ENST00000483544 HERC5Q9UII4 1024 aaKnown RBP13.56□□□□□ -0.24
LINC00477-201ENST00000483544 CAPN6Q9Y6Q1 641 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms