RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 LMBR1Q8WVP7 490 aa10.01□□□□□ -0.81
DDX56-211ENST00000479602 SEPT1Q8WYJ6 367 aa10.01□□□□□ -0.81
DDX56-211ENST00000479602 TNPO1Q92973 898 aaKnown RBP10.01□□□□□ -0.81
DDX56-211ENST00000479602 ZNF689Q96CS4 500 aaPredicted RBP10.01□□□□□ -0.81
DDX56-211ENST00000479602 MRPL38Q96DV4 380 aaKnown RBP10.01□□□□□ -0.81
DDX56-211ENST00000479602 PGBD1Q96JS3 809 aa10.01□□□□□ -0.81
DDX56-211ENST00000479602 ZNF396Q96N95 335 aaPredicted RBP10.01□□□□□ -0.81
DDX56-211ENST00000479602 SAMD11Q96NU1 681 aa10.01□□□□□ -0.81
DDX56-211ENST00000479602 LRFN3Q9BTN0 628 aa10.01□□□□□ -0.81
DDX56-211ENST00000479602 TEKT3Q9BXF9 490 aa10.01□□□□□ -0.81
DDX56-211ENST00000479602 RAB34Q9BZG1 259 aa10.01□□□□□ -0.81
DDX56-211ENST00000479602 UBE2ZQ9H832 354 aaPredicted RBP10.01□□□□□ -0.81
DDX56-211ENST00000479602 DAXXQ9UER7 740 aaPredicted RBP10.01□□□□□ -0.81
DDX56-211ENST00000479602 CFAP45Q9UL16 551 aa10.01□□□□□ -0.81
DDX56-211ENST00000479602 COL4A6Q14031 1691 aa10□□□□□ -0.81
DDX56-211ENST00000479602 POTEB3A0JP26 581 aa10□□□□□ -0.81
DDX56-211ENST00000479602 GAS7O60861 476 aa10□□□□□ -0.81
DDX56-211ENST00000479602 GNAT1P11488 350 aa10□□□□□ -0.81
DDX56-211ENST00000479602 SKIV2LQ15477 1246 aaKnown RBP10□□□□□ -0.81
DDX56-211ENST00000479602 CALCRLQ16602 461 aa10□□□□□ -0.81
DDX56-211ENST00000479602 CTC1Q2NKJ3 1217 aa10□□□□□ -0.81
DDX56-211ENST00000479602 HYIQ5T013 277 aa10□□□□□ -0.81
DDX56-211ENST00000479602 LRCH2Q5VUJ6 765 aa10□□□□□ -0.81
DDX56-211ENST00000479602 POTEBQ6S5H4 581 aa10□□□□□ -0.81
DDX56-211ENST00000479602 RUFY4Q6ZNE9 571 aa10□□□□□ -0.81
DDX56-211ENST00000479602 POTEDQ86YR6 584 aa10□□□□□ -0.81
DDX56-211ENST00000479602 ZNF710Q8N1W2 664 aa10□□□□□ -0.81
DDX56-211ENST00000479602 ZNF579Q8NAF0 562 aaKnown RBP10□□□□□ -0.81
DDX56-211ENST00000479602 KCNG4Q8TDN1 519 aa10□□□□□ -0.81
DDX56-211ENST00000479602 SEPT8Q92599 483 aa10□□□□□ -0.81
DDX56-211ENST00000479602 APBB2Q92870 758 aa10□□□□□ -0.81
DDX56-211ENST00000479602 CLP1Q92989 425 aaKnown RBP10□□□□□ -0.81
DDX56-211ENST00000479602 SCAND2PQ9GZW5 306 aaPredicted RBP10□□□□□ -0.81
DDX56-211ENST00000479602 CHMP5Q9NZZ3 219 aa10□□□□□ -0.81
DDX56-211ENST00000479602 TCEAL9Q9UHQ7 104 aa10□□□□□ -0.81
DDX56-211ENST00000479602 PCDHA10Q9Y5I2 948 aa10□□□□□ -0.81
DDX56-211ENST00000479602 MAFBQ9Y5Q3 323 aaPredicted RBP10□□□□□ -0.81
DDX56-211ENST00000479602 COL1A2P08123 1366 aa10□□□□□ -0.81
DDX56-211ENST00000479602 MICAL3Q7RTP6 2002 aa9.99□□□□□ -0.81
DDX56-211ENST00000479602 CACNA1HO95180 2353 aa9.99□□□□□ -0.81
DDX56-211ENST00000479602 GRXCR2A6NFK2 248 aa9.99□□□□□ -0.81
DDX56-211ENST00000479602 NOP56O00567 594 aaKnown RBP9.99□□□□□ -0.81
DDX56-211ENST00000479602 WNT7AO00755 349 aa9.99□□□□□ -0.81
DDX56-211ENST00000479602 CCNE2O96020 404 aa9.99□□□□□ -0.81
DDX56-211ENST00000479602 RB1P06400 928 aa9.99□□□□□ -0.81
DDX56-211ENST00000479602 XRCC6P12956 609 aaKnown RBP eCLIP9.99□□□□□ -0.81
DDX56-211ENST00000479602 TCF7P36402 384 aaPredicted RBP9.99□□□□□ -0.81
DDX56-211ENST00000479602 LONP1P36776 959 aaKnown RBP9.99□□□□□ -0.81
DDX56-211ENST00000479602 LTBRP36941 435 aa9.99□□□□□ -0.81
DDX56-211ENST00000479602 ACTR2P61160 394 aa9.99□□□□□ -0.81
DDX56-211ENST00000479602 PTGDRQ13258 359 aa9.99□□□□□ -0.81
DDX56-211ENST00000479602 CAMK1Q14012 370 aa9.99□□□□□ -0.81
DDX56-211ENST00000479602 LPIN1Q14693 890 aa9.99□□□□□ -0.81
DDX56-211ENST00000479602 EPHA7Q15375 998 aa9.99□□□□□ -0.81
DDX56-211ENST00000479602 TMEM266Q2M3C6 531 aa9.99□□□□□ -0.81
DDX56-211ENST00000479602 HAUS3Q68CZ6 603 aa9.99□□□□□ -0.81
DDX56-211ENST00000479602 MCTP1Q6DN14 999 aa9.99□□□□□ -0.81
DDX56-211ENST00000479602 FAM117BQ6P1L5 589 aa9.99□□□□□ -0.81
DDX56-211ENST00000479602 TAF2Q6P1X5 1199 aa9.99□□□□□ -0.81
DDX56-211ENST00000479602 TMEM192Q8IY95 271 aa9.99□□□□□ -0.81
DDX56-211ENST00000479602 MYOCDQ8IZQ8 938 aa9.99□□□□□ -0.81
DDX56-211ENST00000479602 TMEM87AQ8NBN3 555 aa9.99□□□□□ -0.81
DDX56-211ENST00000479602 LINC00301Q8NCQ3 95 aa9.99□□□□□ -0.81
DDX56-211ENST00000479602 FBXO22Q8NEZ5 403 aa9.99□□□□□ -0.81
DDX56-211ENST00000479602 FAM167AQ96KS9 214 aa9.99□□□□□ -0.81
DDX56-211ENST00000479602 HSD17B14Q9BPX1 270 aa9.99□□□□□ -0.81
DDX56-211ENST00000479602 POLR3CQ9BUI4 534 aaPredicted RBP9.99□□□□□ -0.81
DDX56-211ENST00000479602 TMEM60Q9H2L4 133 aa9.99□□□□□ -0.81
DDX56-211ENST00000479602 RCOR1Q9UKL0 485 aa9.99□□□□□ -0.81
DDX56-211ENST00000479602 ZNF215Q9UL58 517 aaPredicted RBP9.99□□□□□ -0.81
DDX56-211ENST00000479602 MTUS1Q9ULD2 1270 aa9.99□□□□□ -0.81
DDX56-211ENST00000479602 PCDHA12Q9UN75 941 aa9.99□□□□□ -0.81
DDX56-211ENST00000479602 PCDHB6Q9Y5E3 794 aa9.99□□□□□ -0.81
DDX56-211ENST00000479602 SRPRBQ9Y5M8 271 aaKnown RBP9.99□□□□□ -0.81
DDX56-211ENST00000479602 SQORQ9Y6N5 450 aa9.99□□□□□ -0.81
DDX56-211ENST00000479602 DOCK5Q9H7D0 1870 aa9.99□□□□□ -0.81
DDX56-211ENST00000479602 C5orf42Q9H799 3197 aa9.99□□□□□ -0.81
DDX56-211ENST00000479602 MYH9P35579 1960 aaKnown RBP9.99□□□□□ -0.81
DDX56-211ENST00000479602 TTC3P53804 2025 aa9.99□□□□□ -0.81
DDX56-211ENST00000479602 FAM237AA0A1B0GTK4 181 aa9.98□□□□□ -0.81
DDX56-211ENST00000479602 C19orf67A6NJJ6 358 aa9.98□□□□□ -0.81
DDX56-211ENST00000479602 PSAPP07602 524 aa9.98□□□□□ -0.81
DDX56-211ENST00000479602 RPA1P27694 616 aa9.98□□□□□ -0.81
DDX56-211ENST00000479602 BMPR1AP36894 532 aa9.98□□□□□ -0.81
DDX56-211ENST00000479602 PLA2G5P39877 138 aa9.98□□□□□ -0.81
DDX56-211ENST00000479602 KRT85P78386 507 aa9.98□□□□□ -0.81
DDX56-211ENST00000479602 PKP1Q13835 747 aa9.98□□□□□ -0.81
DDX56-211ENST00000479602 FBXO47Q5MNV8 452 aa9.98□□□□□ -0.81
DDX56-211ENST00000479602 MIS18BP1Q6P0N0 1132 aa9.98□□□□□ -0.81
DDX56-211ENST00000479602 C4orf19Q8IY42 314 aa9.98□□□□□ -0.81
DDX56-211ENST00000479602 KCNN1Q92952 543 aa9.98□□□□□ -0.81
DDX56-211ENST00000479602 IFIH1Q9BYX4 1025 aaKnown RBP9.98□□□□□ -0.81
DDX56-211ENST00000479602 SMARCAD1Q9H4L7 1026 aa9.98□□□□□ -0.81
DDX56-211ENST00000479602 TTC12Q9H892 705 aaPredicted RBP9.98□□□□□ -0.81
DDX56-211ENST00000479602 AGO3Q9H9G7 860 aaKnown RBP9.98□□□□□ -0.81
DDX56-211ENST00000479602 TUFT1Q9NNX1 390 aa9.98□□□□□ -0.81
DDX56-211ENST00000479602 DISC1Q9NRI5 854 aa9.98□□□□□ -0.81
DDX56-211ENST00000479602 ERAP1Q9NZ08 941 aa9.98□□□□□ -0.81
DDX56-211ENST00000479602 DGKIO75912 1065 aa9.97□□□□□ -0.81
DDX56-211ENST00000479602 P4HBP07237 508 aaKnown RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms