RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 TOB1P50616 345 aaPredicted RBP13.04□□□□□ -0.32
LSM2-212ENST00000477182 STXBP2Q15833 593 aa13.04□□□□□ -0.32
LSM2-212ENST00000477182 ARHGEF16Q5VV41 709 aa13.04□□□□□ -0.32
LSM2-212ENST00000477182 IL31RAQ8NI17 732 aa13.04□□□□□ -0.32
LSM2-212ENST00000477182 CHAMP1Q96JM3 812 aa13.04□□□□□ -0.32
LSM2-212ENST00000477182 NOL7Q9UMY1 257 aaKnown RBP13.04□□□□□ -0.32
LSM2-212ENST00000477182 FRMPD4Q14CM0 1322 aa13.04□□□□□ -0.32
LSM2-212ENST00000477182 EPG5Q9HCE0 2579 aa13.03□□□□□ -0.32
LSM2-212ENST00000477182 C17orf102A2RUQ5 167 aa13.03□□□□□ -0.32
LSM2-212ENST00000477182 EDIL3O43854 480 aa13.03□□□□□ -0.32
LSM2-212ENST00000477182 PPFIA4O75335 1185 aa13.03□□□□□ -0.32
LSM2-212ENST00000477182 CSPG5O95196 566 aa13.03□□□□□ -0.32
LSM2-212ENST00000477182 PDGFBP01127 241 aaPredicted RBP13.03□□□□□ -0.32
LSM2-212ENST00000477182 ARHGAP4P98171 946 aa13.03□□□□□ -0.32
LSM2-212ENST00000477182 CAMK1Q14012 370 aa13.03□□□□□ -0.32
LSM2-212ENST00000477182 BTG3Q14201 252 aaPredicted RBP13.03□□□□□ -0.32
LSM2-212ENST00000477182 NBR1Q14596 966 aa13.03□□□□□ -0.32
LSM2-212ENST00000477182 LETM2Q2VYF4 491 aa13.03□□□□□ -0.32
LSM2-212ENST00000477182 NEK8Q86SG6 692 aa13.03□□□□□ -0.32
LSM2-212ENST00000477182 UBALD2Q8IYN6 164 aa13.03□□□□□ -0.32
LSM2-212ENST00000477182 NSUN6Q8TEA1 469 aaKnown RBP13.03□□□□□ -0.32
LSM2-212ENST00000477182 TNPO1Q92973 898 aaKnown RBP13.03□□□□□ -0.32
LSM2-212ENST00000477182 ATP6V0A1Q93050 837 aa13.03□□□□□ -0.32
LSM2-212ENST00000477182 ZFP91Q96JP5 570 aaPredicted RBP13.03□□□□□ -0.32
LSM2-212ENST00000477182 IWS1Q96ST2 819 aa13.03□□□□□ -0.32
LSM2-212ENST00000477182 PDCD2LQ9BRP1 358 aa13.03□□□□□ -0.32
LSM2-212ENST00000477182 DDX41Q9UJV9 622 aaKnown RBP13.03□□□□□ -0.32
LSM2-212ENST00000477182 ATP6V1DQ9Y5K8 247 aa13.03□□□□□ -0.32
LSM2-212ENST00000477182 DOCK5Q9H7D0 1870 aa13.03□□□□□ -0.32
LSM2-212ENST00000477182 ZNF292O60281 2723 aa13.02□□□□□ -0.32
LSM2-212ENST00000477182 MYCLP12524 364 aaPredicted RBP13.02□□□□□ -0.33
LSM2-212ENST00000477182 HOXD8P13378 290 aaPredicted RBP13.02□□□□□ -0.33
LSM2-212ENST00000477182 NRIP1P48552 1158 aa13.02□□□□□ -0.33
LSM2-212ENST00000477182 TRAPPC10P48553 1259 aa13.02□□□□□ -0.33
LSM2-212ENST00000477182 DNM1Q05193 864 aaKnown RBP13.02□□□□□ -0.33
LSM2-212ENST00000477182 PGM5Q15124 567 aa13.02□□□□□ -0.33
LSM2-212ENST00000477182 RILPL1Q5EBL4 403 aa13.02□□□□□ -0.33
LSM2-212ENST00000477182 TTC38Q5R3I4 469 aa13.02□□□□□ -0.33
LSM2-212ENST00000477182 TMEM105Q8N8V8 129 aa13.02□□□□□ -0.33
LSM2-212ENST00000477182 CRYGNQ8WXF5 182 aa13.02□□□□□ -0.33
LSM2-212ENST00000477182 SUSD6Q92537 303 aa13.02□□□□□ -0.33
LSM2-212ENST00000477182 RC3H2Q9HBD1 1191 aaKnown RBP13.02□□□□□ -0.33
LSM2-212ENST00000477182 TFIP11Q9UBB9 837 aaKnown RBP13.02□□□□□ -0.33
LSM2-212ENST00000477182 BARX2Q9UMQ3 279 aaPredicted RBP13.02□□□□□ -0.33
LSM2-212ENST00000477182 KMT2BQ9UMN6 2715 aaPredicted RBP13.02□□□□□ -0.33
LSM2-212ENST00000477182 DMXL1Q9Y485 3027 aa13.01□□□□□ -0.33
LSM2-212ENST00000477182 CCNT1O60563 726 aaKnown RBP13.01□□□□□ -0.33
LSM2-212ENST00000477182 TDP2O95551 362 aa13.01□□□□□ -0.33
LSM2-212ENST00000477182 GLP2RO95838 553 aa13.01□□□□□ -0.33
LSM2-212ENST00000477182 NR3C2P08235 984 aa13.01□□□□□ -0.33
LSM2-212ENST00000477182 CYP3A4P08684 503 aa13.01□□□□□ -0.33
LSM2-212ENST00000477182 CCND2P30279 289 aa13.01□□□□□ -0.33
LSM2-212ENST00000477182 MCM7P33993 719 aa13.01□□□□□ -0.33
LSM2-212ENST00000477182 ZNF76P36508 570 aa13.01□□□□□ -0.33
LSM2-212ENST00000477182 USP11P51784 963 aa13.01□□□□□ -0.33
LSM2-212ENST00000477182 CEBPZQ03701 1054 aaKnown RBP13.01□□□□□ -0.33
LSM2-212ENST00000477182 MTMR3Q13615 1198 aa13.01□□□□□ -0.33
LSM2-212ENST00000477182 HIC1Q14526 733 aa13.01□□□□□ -0.33
LSM2-212ENST00000477182 PUM1Q14671 1186 aaKnown RBP eCLIP13.01□□□□□ -0.33
LSM2-212ENST00000477182 ZNF174Q15697 407 aa13.01□□□□□ -0.33
LSM2-212ENST00000477182 PCNX4Q63HM2 1172 aa13.01□□□□□ -0.33
LSM2-212ENST00000477182 ASTLQ6HA08 431 aaPredicted RBP13.01□□□□□ -0.33
LSM2-212ENST00000477182 ADGRD2Q7Z7M1 963 aa13.01□□□□□ -0.33
LSM2-212ENST00000477182 SPPL3Q8TCT6 385 aa13.01□□□□□ -0.33
LSM2-212ENST00000477182 ZNF689Q96CS4 500 aaPredicted RBP13.01□□□□□ -0.33
LSM2-212ENST00000477182 RMDN1Q96DB5 314 aa13.01□□□□□ -0.33
LSM2-212ENST00000477182 ZNF396Q96N95 335 aaPredicted RBP13.01□□□□□ -0.33
LSM2-212ENST00000477182 USP28Q96RU2 1077 aa13.01□□□□□ -0.33
LSM2-212ENST00000477182 PCDHB6Q9Y5E3 794 aa13.01□□□□□ -0.33
LSM2-212ENST00000477182 CLIC4Q9Y696 253 aa13.01□□□□□ -0.33
LSM2-212ENST00000477182 MRVI1Q9Y6F6 885 aa13.01□□□□□ -0.33
LSM2-212ENST00000477182 WDR87Q6ZQQ6 2873 aa13□□□□□ -0.33
LSM2-212ENST00000477182 EIF3JO75822 258 aaKnown RBP13□□□□□ -0.33
LSM2-212ENST00000477182 ITGB1P05556 798 aa13□□□□□ -0.33
LSM2-212ENST00000477182 CTSHP09668 335 aa13□□□□□ -0.33
LSM2-212ENST00000477182 SRGAP2BP0DMP2 458 aa13□□□□□ -0.33
LSM2-212ENST00000477182 GNAT1P11488 350 aa13□□□□□ -0.33
LSM2-212ENST00000477182 NCLP19338 710 aaKnown RBP13□□□□□ -0.33
LSM2-212ENST00000477182 HOXC8P31273 242 aa13□□□□□ -0.33
LSM2-212ENST00000477182 CLCN5P51795 746 aa13□□□□□ -0.33
LSM2-212ENST00000477182 MRPS9P82933 396 aaKnown RBP13□□□□□ -0.33
LSM2-212ENST00000477182 KCNV1Q6PIU1 500 aa13□□□□□ -0.33
LSM2-212ENST00000477182 RBM23Q86U06 439 aaKnown RBP13□□□□□ -0.33
LSM2-212ENST00000477182 KREMEN2Q8NCW0 462 aa13□□□□□ -0.33
LSM2-212ENST00000477182 CDCA3Q99618 268 aaPredicted RBP13□□□□□ -0.33
LSM2-212ENST00000477182 SEMA4AQ9H3S1 761 aa13□□□□□ -0.33
LSM2-212ENST00000477182 TLE6Q9H808 572 aa13□□□□□ -0.33
LSM2-212ENST00000477182 RTEL1Q9NZ71 1219 aa13□□□□□ -0.33
LSM2-212ENST00000477182 SORCS3Q9UPU3 1222 aa13□□□□□ -0.33
LSM2-212ENST00000477182 NR2E1Q9Y466 385 aa13□□□□□ -0.33
LSM2-212ENST00000477182 DNAH14Q0VDD8 3507 aa13□□□□□ -0.33
LSM2-212ENST00000477182 TTC3P53804 2025 aa13□□□□□ -0.33
LSM2-212ENST00000477182 CYP3A7-CYP3A51PA0A087WV96 503 aa12.99□□□□□ -0.33
LSM2-212ENST00000477182 FAM86B1E9PN63 330 aa12.99□□□□□ -0.33
LSM2-212ENST00000477182 TREHO43280 583 aa12.99□□□□□ -0.33
LSM2-212ENST00000477182 SLC37A4O43826 429 aa12.99□□□□□ -0.33
LSM2-212ENST00000477182 FAM86B2P0C5J1 330 aa12.99□□□□□ -0.33
LSM2-212ENST00000477182 GCFC2P16383 781 aaKnown RBP12.99□□□□□ -0.33
LSM2-212ENST00000477182 CYP3A7P24462 503 aa12.99□□□□□ -0.33
LSM2-212ENST00000477182 DNAJB1P25685 340 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms