RNA–Protein interactions for RNA: ENST00000474644.1

COL1A1-204, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-204ENST00000474644 AXDND1Q5T1B0 1012 aaPredicted RBP17.56■□□□□ 0.4
COL1A1-204ENST00000474644 EFCAB12Q6NXP0 572 aa17.56■□□□□ 0.4
COL1A1-204ENST00000474644 RSPH3Q86UC2 560 aa17.56■□□□□ 0.4
COL1A1-204ENST00000474644 KIAA0319LQ8IZA0 1049 aa17.56■□□□□ 0.4
COL1A1-204ENST00000474644 METTL13Q8N6R0 699 aa17.56■□□□□ 0.4
COL1A1-204ENST00000474644 RETREG2Q8NC44 543 aa17.56■□□□□ 0.4
COL1A1-204ENST00000474644 SLC7A3Q8WY07 619 aa17.56■□□□□ 0.4
COL1A1-204ENST00000474644 CALML4Q96GE6 196 aa17.56■□□□□ 0.4
COL1A1-204ENST00000474644 SCLYQ96I15 445 aa17.56■□□□□ 0.4
COL1A1-204ENST00000474644 SPATA32Q96LK8 384 aa17.56■□□□□ 0.4
COL1A1-204ENST00000474644 PLIN2Q99541 437 aa17.56■□□□□ 0.4
COL1A1-204ENST00000474644 CCSER1Q9C0I3 900 aa17.56■□□□□ 0.4
COL1A1-204ENST00000474644 NT5C3AQ9H0P0 336 aa17.56■□□□□ 0.4
COL1A1-204ENST00000474644 DHX33Q9H6R0 707 aaKnown RBP17.56■□□□□ 0.4
COL1A1-204ENST00000474644 BMP2KQ9NSY1 1161 aaPredicted RBP17.56■□□□□ 0.4
COL1A1-204ENST00000474644 PCDHA7Q9UN72 937 aa17.56■□□□□ 0.4
COL1A1-204ENST00000474644 TRIP12Q14669 1992 aaPredicted RBP17.56■□□□□ 0.4
COL1A1-204ENST00000474644 RPLP2P05387 115 aaKnown RBP17.55■□□□□ 0.4
COL1A1-204ENST00000474644 IQCF3P0C7M6 154 aa17.55■□□□□ 0.4
COL1A1-204ENST00000474644 MAGEA10P43363 369 aaPredicted RBP17.55■□□□□ 0.4
COL1A1-204ENST00000474644 MRPS6P82932 125 aaKnown RBP17.55■□□□□ 0.4
COL1A1-204ENST00000474644 MDM2Q00987 491 aaPredicted RBP17.55■□□□□ 0.4
COL1A1-204ENST00000474644 FPGSQ05932 587 aa17.55■□□□□ 0.4
COL1A1-204ENST00000474644 MKRN4PQ13434 485 aaPredicted RBP17.55■□□□□ 0.4
COL1A1-204ENST00000474644 TMEM199Q8N511 208 aa17.55■□□□□ 0.4
COL1A1-204ENST00000474644 KCTD17Q8N5Z5 321 aa17.55■□□□□ 0.4
COL1A1-204ENST00000474644 RASSF8Q8NHQ8 419 aa17.55■□□□□ 0.4
COL1A1-204ENST00000474644 LBHD1Q9BQE6 289 aaPredicted RBP17.55■□□□□ 0.4
COL1A1-204ENST00000474644 JPH2Q9BR39 696 aaPredicted RBP17.55■□□□□ 0.4
COL1A1-204ENST00000474644 SCAND2PQ9GZW5 306 aaPredicted RBP17.55■□□□□ 0.4
COL1A1-204ENST00000474644 BHMT2Q9H2M3 363 aa17.55■□□□□ 0.4
COL1A1-204ENST00000474644 SUGCTQ9HAC7 445 aa17.55■□□□□ 0.4
COL1A1-204ENST00000474644 XPNPEP1Q9NQW7 623 aa17.55■□□□□ 0.4
COL1A1-204ENST00000474644 DNM3Q9UQ16 869 aa17.55■□□□□ 0.4
COL1A1-204ENST00000474644 ARHGEF35A5YM69 484 aa17.54■□□□□ 0.4
COL1A1-204ENST00000474644 RSPH10B2B2RC85 870 aa17.54■□□□□ 0.4
COL1A1-204ENST00000474644 USO1O60763 962 aaKnown RBP17.54■□□□□ 0.4
COL1A1-204ENST00000474644 DGAT1O75907 488 aa17.54■□□□□ 0.4
COL1A1-204ENST00000474644 EYA4O95677 639 aa17.54■□□□□ 0.4
COL1A1-204ENST00000474644 RSPH10BP0C881 870 aa17.54■□□□□ 0.4
COL1A1-204ENST00000474644 CSF2RAP15509 400 aa17.54■□□□□ 0.4
COL1A1-204ENST00000474644 PLCG1P19174 1290 aa17.54■□□□□ 0.4
COL1A1-204ENST00000474644 TMOD1P28289 359 aa17.54■□□□□ 0.4
COL1A1-204ENST00000474644 TXLNAP40222 546 aa17.54■□□□□ 0.4
COL1A1-204ENST00000474644 MGAT3Q09327 533 aa17.54■□□□□ 0.4
COL1A1-204ENST00000474644 TMEM62Q0P6H9 643 aa17.54■□□□□ 0.4
COL1A1-204ENST00000474644 DRP2Q13474 957 aa17.54■□□□□ 0.4
COL1A1-204ENST00000474644 MBTPS1Q14703 1052 aa17.54■□□□□ 0.4
COL1A1-204ENST00000474644 FAM26DQ5JW98 314 aa17.54■□□□□ 0.4
COL1A1-204ENST00000474644 SHC4Q6S5L8 630 aa17.54■□□□□ 0.4
COL1A1-204ENST00000474644 EXOC8Q8IYI6 725 aa17.54■□□□□ 0.4
COL1A1-204ENST00000474644 LRRC15Q8TF66 581 aa17.54■□□□□ 0.4
COL1A1-204ENST00000474644 MAP7D2Q96T17 732 aa17.54■□□□□ 0.4
COL1A1-204ENST00000474644 ATP6V0A4Q9HBG4 840 aa17.54■□□□□ 0.4
COL1A1-204ENST00000474644 RANBP2P49792 3224 aaKnown RBP17.53■□□□□ 0.4
COL1A1-204ENST00000474644 VTNP04004 478 aa17.53■□□□□ 0.4
COL1A1-204ENST00000474644 RFC2P35250 354 aa17.53■□□□□ 0.4
COL1A1-204ENST00000474644 PADI6Q6TGC4 694 aa17.53■□□□□ 0.4
COL1A1-204ENST00000474644 NME8Q8N427 588 aa17.53■□□□□ 0.4
COL1A1-204ENST00000474644 MTRQ99707 1265 aa17.53■□□□□ 0.4
COL1A1-204ENST00000474644 GDPD2Q9HCC8 539 aa17.53■□□□□ 0.4
COL1A1-204ENST00000474644 AKT3Q9Y243 479 aa17.53■□□□□ 0.4
COL1A1-204ENST00000474644 TRPV2Q9Y5S1 764 aa17.53■□□□□ 0.4
COL1A1-204ENST00000474644 CDY2AQ9Y6F7 541 aa17.53■□□□□ 0.4
COL1A1-204ENST00000474644 KAT6AQ92794 2004 aa17.53■□□□□ 0.4
COL1A1-204ENST00000474644 GAS2O43903 313 aaKnown RBP17.52■□□□□ 0.4
COL1A1-204ENST00000474644 CHRNA1P02708 482 aa17.52■□□□□ 0.4
COL1A1-204ENST00000474644 DNM2P50570 870 aa17.52■□□□□ 0.4
COL1A1-204ENST00000474644 PPIGQ13427 754 aaKnown RBP eCLIP17.52■□□□□ 0.4
COL1A1-204ENST00000474644 GPNMBQ14956 572 aa17.52■□□□□ 0.4
COL1A1-204ENST00000474644 IER5Q5VY09 327 aa17.52■□□□□ 0.4
COL1A1-204ENST00000474644 TMEM143Q96AN5 459 aa17.52■□□□□ 0.4
COL1A1-204ENST00000474644 PPP1R16BQ96T49 567 aa17.52■□□□□ 0.4
COL1A1-204ENST00000474644 GDF15Q99988 308 aa17.52■□□□□ 0.4
COL1A1-204ENST00000474644 BLOC1S4Q9NUP1 217 aa17.52■□□□□ 0.4
COL1A1-204ENST00000474644 SUCLA2Q9P2R7 463 aaPredicted RBP17.52■□□□□ 0.4
COL1A1-204ENST00000474644 CCDC39Q9UFE4 941 aa17.52■□□□□ 0.4
COL1A1-204ENST00000474644 A0A087X0B3 334 aa17.51■□□□□ 0.39
COL1A1-204ENST00000474644 RBAK-RBAKDNI3L0D1 243 aa17.51■□□□□ 0.39
COL1A1-204ENST00000474644 M0QZ92 97 aa17.51■□□□□ 0.39
COL1A1-204ENST00000474644 NBNO60934 754 aa17.51■□□□□ 0.39
COL1A1-204ENST00000474644 PARNO95453 639 aaKnown RBP17.51■□□□□ 0.39
COL1A1-204ENST00000474644 PLA2G4BP0C869 781 aa17.51■□□□□ 0.39
COL1A1-204ENST00000474644 EPHB4P54760 987 aa17.51■□□□□ 0.39
COL1A1-204ENST00000474644 KIZQ2M2Z5 673 aa17.51■□□□□ 0.39
COL1A1-204ENST00000474644 RESP18Q5W5W9 173 aa17.51■□□□□ 0.39
COL1A1-204ENST00000474644 RAD54LQ92698 747 aa17.51■□□□□ 0.39
COL1A1-204ENST00000474644 VWCEQ96DN2 955 aa17.51■□□□□ 0.39
COL1A1-204ENST00000474644 CELF4Q9BZC1 486 aaKnown RBP17.51■□□□□ 0.39
COL1A1-204ENST00000474644 OSBPL7Q9BZF2 842 aa17.51■□□□□ 0.39
COL1A1-204ENST00000474644 IL23AQ9NPF7 189 aa17.51■□□□□ 0.39
COL1A1-204ENST00000474644 SIP14410 1827 aa17.51■□□□□ 0.39
COL1A1-204ENST00000474644 GPR32O75388 356 aa17.5■□□□□ 0.39
COL1A1-204ENST00000474644 CXCL10P02778 98 aa17.5■□□□□ 0.39
COL1A1-204ENST00000474644 SSBP05455 408 aaKnown RBP eCLIP17.5■□□□□ 0.39
COL1A1-204ENST00000474644 CYP11B2P19099 503 aa17.5■□□□□ 0.39
COL1A1-204ENST00000474644 GPC3P51654 580 aa17.5■□□□□ 0.39
COL1A1-204ENST00000474644 SLC12A3P55017 1021 aa17.5■□□□□ 0.39
COL1A1-204ENST00000474644 NAALADL2Q58DX5 795 aa17.5■□□□□ 0.39
COL1A1-204ENST00000474644 DEFB128Q7Z7B8 93 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms