RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 PRR23AA6NEV1 266 aa5.88□□□□□ -1.47
SNRNP40-204ENST00000474025 M0QZ92 97 aa5.88□□□□□ -1.47
SNRNP40-204ENST00000474025 CYP21A2P08686 494 aa5.88□□□□□ -1.47
SNRNP40-204ENST00000474025 IBSPP21815 317 aaPredicted RBP5.88□□□□□ -1.47
SNRNP40-204ENST00000474025 SP100P23497 879 aaPredicted RBP5.88□□□□□ -1.47
SNRNP40-204ENST00000474025 NBL1P41271 181 aa5.88□□□□□ -1.47
SNRNP40-204ENST00000474025 KRT76Q01546 638 aa5.88□□□□□ -1.47
SNRNP40-204ENST00000474025 NUCB1Q02818 461 aa5.88□□□□□ -1.47
SNRNP40-204ENST00000474025 APOBRQ0VD83 1088 aa5.88□□□□□ -1.47
SNRNP40-204ENST00000474025 TRDNQ13061 729 aa5.88□□□□□ -1.47
SNRNP40-204ENST00000474025 WTAPQ15007 396 aa5.88□□□□□ -1.47
SNRNP40-204ENST00000474025 PLCB4Q15147 1175 aa5.88□□□□□ -1.47
SNRNP40-204ENST00000474025 TMEM266Q2M3C6 531 aa5.88□□□□□ -1.47
SNRNP40-204ENST00000474025 C6orf132Q5T0Z8 1188 aa5.88□□□□□ -1.47
SNRNP40-204ENST00000474025 FAM102BQ5T8I3 360 aa5.88□□□□□ -1.47
SNRNP40-204ENST00000474025 PLPP4Q5VZY2 271 aa5.88□□□□□ -1.47
SNRNP40-204ENST00000474025 PDE12Q6L8Q7 609 aaKnown RBP5.88□□□□□ -1.47
SNRNP40-204ENST00000474025 B4GALNT3Q6L9W6 998 aa5.88□□□□□ -1.47
SNRNP40-204ENST00000474025 ANKRD54Q6NXT1 300 aa5.88□□□□□ -1.47
SNRNP40-204ENST00000474025 SYCE2Q6PIF2 218 aa5.88□□□□□ -1.47
SNRNP40-204ENST00000474025 CATIPQ7Z7H3 387 aa5.88□□□□□ -1.47
SNRNP40-204ENST00000474025 LAPTM4BQ86VI4 370 aa5.88□□□□□ -1.47
SNRNP40-204ENST00000474025 CHD1LQ86WJ1 897 aa5.88□□□□□ -1.47
SNRNP40-204ENST00000474025 COLGALT1Q8NBJ5 622 aa5.88□□□□□ -1.47
SNRNP40-204ENST00000474025 KREMEN2Q8NCW0 462 aa5.88□□□□□ -1.47
SNRNP40-204ENST00000474025 MICAL1Q8TDZ2 1067 aa5.88□□□□□ -1.47
SNRNP40-204ENST00000474025 RRP36Q96EU6 259 aaKnown RBP5.88□□□□□ -1.47
SNRNP40-204ENST00000474025 RIPOR3Q96MK2 946 aa5.88□□□□□ -1.47
SNRNP40-204ENST00000474025 CELF4Q9BZC1 486 aaKnown RBP5.88□□□□□ -1.47
SNRNP40-204ENST00000474025 ERVK-5Q9HDB9 667 aa5.88□□□□□ -1.47
SNRNP40-204ENST00000474025 JPH1Q9HDC5 661 aaPredicted RBP5.88□□□□□ -1.47
SNRNP40-204ENST00000474025 JADE2Q9NQC1 790 aa5.88□□□□□ -1.47
SNRNP40-204ENST00000474025 AAASQ9NRG9 546 aa5.88□□□□□ -1.47
SNRNP40-204ENST00000474025 PKD2L1Q9P0L9 805 aa5.88□□□□□ -1.47
SNRNP40-204ENST00000474025 CDH22Q9UJ99 828 aa5.88□□□□□ -1.47
SNRNP40-204ENST00000474025 LRFN2Q9ULH4 789 aa5.88□□□□□ -1.47
SNRNP40-204ENST00000474025 UBIAD1Q9Y5Z9 338 aa5.88□□□□□ -1.47
SNRNP40-204ENST00000474025 FNDC1Q4ZHG4 1894 aaPredicted RBP5.88□□□□□ -1.47
SNRNP40-204ENST00000474025 ASPMQ8IZT6 3477 aa5.87□□□□□ -1.47
SNRNP40-204ENST00000474025 TPRP12270 2363 aaKnown RBP5.87□□□□□ -1.47
SNRNP40-204ENST00000474025 ERICH2A1L162 156 aa5.87□□□□□ -1.47
SNRNP40-204ENST00000474025 TBKBP1A7MCY6 615 aa5.87□□□□□ -1.47
SNRNP40-204ENST00000474025 HIDE1A8MVS5 230 aa5.87□□□□□ -1.47
SNRNP40-204ENST00000474025 C2CD4DB7Z1M9 353 aa5.87□□□□□ -1.47
SNRNP40-204ENST00000474025 C9IYK1 514 aa5.87□□□□□ -1.47
SNRNP40-204ENST00000474025 MAFGO15525 162 aa5.87□□□□□ -1.47
SNRNP40-204ENST00000474025 RPS6KA5O75582 802 aa5.87□□□□□ -1.47
SNRNP40-204ENST00000474025 DDAH1O94760 285 aa5.87□□□□□ -1.47
SNRNP40-204ENST00000474025 BRD1O95696 1058 aa5.87□□□□□ -1.47
SNRNP40-204ENST00000474025 SRGAP2BP0DMP2 458 aa5.87□□□□□ -1.47
SNRNP40-204ENST00000474025 HOXB8P17481 243 aaPredicted RBP5.87□□□□□ -1.47
SNRNP40-204ENST00000474025 TECP42680 631 aa5.87□□□□□ -1.47
SNRNP40-204ENST00000474025 ANTXR2P58335 489 aa5.87□□□□□ -1.47
SNRNP40-204ENST00000474025 ACTR2P61160 394 aa5.87□□□□□ -1.47
SNRNP40-204ENST00000474025 NFX1Q12986 1120 aaKnown RBP5.87□□□□□ -1.47
SNRNP40-204ENST00000474025 MTMR3Q13615 1198 aa5.87□□□□□ -1.47
SNRNP40-204ENST00000474025 SART3Q15020 963 aaKnown RBP5.87□□□□□ -1.47
SNRNP40-204ENST00000474025 UBE2SQ16763 222 aa5.87□□□□□ -1.47
SNRNP40-204ENST00000474025 PROX2Q3B8N5 592 aa5.87□□□□□ -1.47
SNRNP40-204ENST00000474025 SPOUT1Q5T280 376 aaKnown RBP5.87□□□□□ -1.47
SNRNP40-204ENST00000474025 LLGL2Q6P1M3 1020 aa5.87□□□□□ -1.47
SNRNP40-204ENST00000474025 MTHFD1LQ6UB35 978 aa5.87□□□□□ -1.47
SNRNP40-204ENST00000474025 FAM43BQ6ZT52 329 aaPredicted RBP5.87□□□□□ -1.47
SNRNP40-204ENST00000474025 SLC24A5Q71RS6 500 aa5.87□□□□□ -1.47
SNRNP40-204ENST00000474025 PLPPR4Q7Z2D5 763 aa5.87□□□□□ -1.47
SNRNP40-204ENST00000474025 RALYLQ86SE5 291 aaKnown RBP5.87□□□□□ -1.47
SNRNP40-204ENST00000474025 ZBTB33Q86T24 672 aa5.87□□□□□ -1.47
SNRNP40-204ENST00000474025 UBALD2Q8IYN6 164 aa5.87□□□□□ -1.47
SNRNP40-204ENST00000474025 THNSL1Q8IYQ7 743 aa5.87□□□□□ -1.47
SNRNP40-204ENST00000474025 NME8Q8N427 588 aa5.87□□□□□ -1.47
SNRNP40-204ENST00000474025 TMEM105Q8N8V8 129 aa5.87□□□□□ -1.47
SNRNP40-204ENST00000474025 IGDCC4Q8TDY8 1250 aa5.87□□□□□ -1.47
SNRNP40-204ENST00000474025 TMEM40Q8WWA1 233 aa5.87□□□□□ -1.47
SNRNP40-204ENST00000474025 MRPS27Q92552 414 aaKnown RBP5.87□□□□□ -1.47
SNRNP40-204ENST00000474025 MAP3K14Q99558 947 aa5.87□□□□□ -1.47
SNRNP40-204ENST00000474025 ADAM2Q99965 735 aa5.87□□□□□ -1.47
SNRNP40-204ENST00000474025 TCF25Q9BQ70 676 aa5.87□□□□□ -1.47
SNRNP40-204ENST00000474025 MYL10Q9BUA6 226 aa5.87□□□□□ -1.47
SNRNP40-204ENST00000474025 APOL5Q9BWW9 433 aa5.87□□□□□ -1.47
SNRNP40-204ENST00000474025 SEMA4AQ9H3S1 761 aa5.87□□□□□ -1.47
SNRNP40-204ENST00000474025 SMOC2Q9H3U7 446 aa5.87□□□□□ -1.47
SNRNP40-204ENST00000474025 POMKQ9H5K3 350 aa5.87□□□□□ -1.47
SNRNP40-204ENST00000474025 AZI2Q9H6S1 392 aa5.87□□□□□ -1.47
SNRNP40-204ENST00000474025 CWH43Q9H720 699 aa5.87□□□□□ -1.47
SNRNP40-204ENST00000474025 PSTPIP2Q9H939 334 aa5.87□□□□□ -1.47
SNRNP40-204ENST00000474025 CDHR5Q9HBB8 845 aa5.87□□□□□ -1.47
SNRNP40-204ENST00000474025 ENTPD7Q9NQZ7 604 aa5.87□□□□□ -1.47
SNRNP40-204ENST00000474025 RGS18Q9NS28 235 aa5.87□□□□□ -1.47
SNRNP40-204ENST00000474025 KCNH7Q9NS40 1196 aa5.87□□□□□ -1.47
SNRNP40-204ENST00000474025 C1orf112Q9NSG2 853 aa5.87□□□□□ -1.47
SNRNP40-204ENST00000474025 TYW1Q9NV66 732 aaKnown RBP5.87□□□□□ -1.47
SNRNP40-204ENST00000474025 TMEM260Q9NX78 707 aa5.87□□□□□ -1.47
SNRNP40-204ENST00000474025 SLC9A2Q9UBY0 812 aa5.87□□□□□ -1.47
SNRNP40-204ENST00000474025 SEC63Q9UGP8 760 aaKnown RBP5.87□□□□□ -1.47
SNRNP40-204ENST00000474025 SORCS3Q9UPU3 1222 aa5.87□□□□□ -1.47
SNRNP40-204ENST00000474025 GINS2Q9Y248 185 aa5.87□□□□□ -1.47
SNRNP40-204ENST00000474025 LZTS1Q9Y250 596 aa5.87□□□□□ -1.47
SNRNP40-204ENST00000474025 NOC2LQ9Y3T9 749 aaKnown RBP5.87□□□□□ -1.47
SNRNP40-204ENST00000474025 NR2E1Q9Y466 385 aa5.87□□□□□ -1.47
SNRNP40-204ENST00000474025 PCDHB7Q9Y5E2 793 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms