RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 A0A1B0GTL3 188 aa3.07□□□□□ -1.92
CALD1-216ENST00000473714 WTIPA6NIX2 430 aaPredicted RBP3.07□□□□□ -1.92
CALD1-216ENST00000473714 CHURC1-FNTBB4DL54 471 aa3.07□□□□□ -1.92
CALD1-216ENST00000473714 NOP56O00567 594 aaKnown RBP3.07□□□□□ -1.92
CALD1-216ENST00000473714 FKTNO75072 461 aa3.07□□□□□ -1.92
CALD1-216ENST00000473714 TBC1D8O95759 1140 aa3.07□□□□□ -1.92
CALD1-216ENST00000473714 CPEP16870 476 aa3.07□□□□□ -1.92
CALD1-216ENST00000473714 SOX5P35711 763 aa3.07□□□□□ -1.92
CALD1-216ENST00000473714 MASP1P48740 699 aa3.07□□□□□ -1.92
CALD1-216ENST00000473714 HUNKP57058 714 aa3.07□□□□□ -1.92
CALD1-216ENST00000473714 GJA9P57773 515 aa3.07□□□□□ -1.92
CALD1-216ENST00000473714 RTP1P59025 263 aa3.07□□□□□ -1.92
CALD1-216ENST00000473714 SQSTM1Q13501 440 aa3.07□□□□□ -1.92
CALD1-216ENST00000473714 HSP90AA2PQ14568 343 aaPredicted RBP3.07□□□□□ -1.92
CALD1-216ENST00000473714 TARBP2Q15633 366 aaKnown RBP3.07□□□□□ -1.92
CALD1-216ENST00000473714 ZC3H12BQ5HYM0 836 aaKnown RBP3.07□□□□□ -1.92
CALD1-216ENST00000473714 CNNM4Q6P4Q7 775 aa3.07□□□□□ -1.92
CALD1-216ENST00000473714 CRIP3Q6Q6R5 217 aa3.07□□□□□ -1.92
CALD1-216ENST00000473714 RNF111Q6ZNA4 994 aa3.07□□□□□ -1.92
CALD1-216ENST00000473714 USP50Q70EL3 339 aaPredicted RBP3.07□□□□□ -1.92
CALD1-216ENST00000473714 DHX37Q8IY37 1157 aaKnown RBP3.07□□□□□ -1.92
CALD1-216ENST00000473714 NIM1KQ8IY84 436 aa3.07□□□□□ -1.92
CALD1-216ENST00000473714 CCDC144CPQ8IYA2 1237 aa3.07□□□□□ -1.92
CALD1-216ENST00000473714 ATL2Q8NHH9 583 aa3.07□□□□□ -1.92
CALD1-216ENST00000473714 KISS1RQ969F8 398 aaPredicted RBP3.07□□□□□ -1.92
CALD1-216ENST00000473714 MAP6Q96JE9 813 aa3.07□□□□□ -1.92
CALD1-216ENST00000473714 PRAM1Q96QH2 718 aa3.07□□□□□ -1.92
CALD1-216ENST00000473714 SLC9A7Q96T83 725 aa3.07□□□□□ -1.92
CALD1-216ENST00000473714 UHRF1Q96T88 793 aaPredicted RBP3.07□□□□□ -1.92
CALD1-216ENST00000473714 MKRN2Q9H000 416 aaKnown RBP3.07□□□□□ -1.92
CALD1-216ENST00000473714 PCED1AQ9H1Q7 454 aa3.07□□□□□ -1.92
CALD1-216ENST00000473714 EPN3Q9H201 632 aa3.07□□□□□ -1.92
CALD1-216ENST00000473714 TAOK3Q9H2K8 898 aa3.07□□□□□ -1.92
CALD1-216ENST00000473714 HOMER2Q9NSB8 354 aa3.07□□□□□ -1.92
CALD1-216ENST00000473714 ADAM30Q9UKF2 790 aa3.07□□□□□ -1.92
CALD1-216ENST00000473714 PLAAQ9Y263 795 aa3.07□□□□□ -1.92
CALD1-216ENST00000473714 PTPN22Q9Y2R2 807 aa3.07□□□□□ -1.92
CALD1-216ENST00000473714 TACC3Q9Y6A5 838 aa3.07□□□□□ -1.92
CALD1-216ENST00000473714 ADGRF5Q8IZF2 1346 aa3.07□□□□□ -1.92
CALD1-216ENST00000473714 IRS2Q9Y4H2 1338 aa3.07□□□□□ -1.92
CALD1-216ENST00000473714 ZDBF2Q9HCK1 2354 aa3.07□□□□□ -1.92
CALD1-216ENST00000473714 TRAV20A0A0B4J274 112 aa3.06□□□□□ -1.92
CALD1-216ENST00000473714 CCDC163A0A0D9SF12 145 aa3.06□□□□□ -1.92
CALD1-216ENST00000473714 SSU72P8A0A1W2PR75 194 aa3.06□□□□□ -1.92
CALD1-216ENST00000473714 ANKRD34BA5PLL1 514 aa3.06□□□□□ -1.92
CALD1-216ENST00000473714 MEIS3P2A8K0S8 358 aa3.06□□□□□ -1.92
CALD1-216ENST00000473714 NUDT19A8MXV4 375 aa3.06□□□□□ -1.92
CALD1-216ENST00000473714 UPK3BL1B0FP48 263 aa3.06□□□□□ -1.92
CALD1-216ENST00000473714 UPK3BL2E5RIL1 263 aa3.06□□□□□ -1.92
CALD1-216ENST00000473714 SUSD5O60279 629 aa3.06□□□□□ -1.92
CALD1-216ENST00000473714 NOBOXO60393 691 aa3.06□□□□□ -1.92
CALD1-216ENST00000473714 CLEC3AO75596 197 aa3.06□□□□□ -1.92
CALD1-216ENST00000473714 PPM1BO75688 479 aa3.06□□□□□ -1.92
CALD1-216ENST00000473714 FAM153BP0C7A2 387 aa3.06□□□□□ -1.92
CALD1-216ENST00000473714 IGFBP6P24592 240 aaPredicted RBP3.06□□□□□ -1.92
CALD1-216ENST00000473714 POLR2AP24928 1970 aaKnown RBP3.06□□□□□ -1.92
CALD1-216ENST00000473714 L1CAMP32004 1257 aa3.06□□□□□ -1.92
CALD1-216ENST00000473714 CPSF1Q10570 1443 aaKnown RBP3.06□□□□□ -1.92
CALD1-216ENST00000473714 LAPTM5Q13571 262 aa3.06□□□□□ -1.92
CALD1-216ENST00000473714 ZYXQ15942 572 aaKnown RBP3.06□□□□□ -1.92
CALD1-216ENST00000473714 TKFCQ3LXA3 575 aa3.06□□□□□ -1.92
CALD1-216ENST00000473714 NOL9Q5SY16 702 aaKnown RBP3.06□□□□□ -1.92
CALD1-216ENST00000473714 CCDC181Q5TID7 509 aa3.06□□□□□ -1.92
CALD1-216ENST00000473714 GALNT18Q6P9A2 607 aa3.06□□□□□ -1.92
CALD1-216ENST00000473714 OTOP1Q7RTM1 612 aa3.06□□□□□ -1.92
CALD1-216ENST00000473714 KIAA0907Q7Z7F0 614 aaPredicted RBP3.06□□□□□ -1.92
CALD1-216ENST00000473714 ARHGEF25Q86VW2 580 aa3.06□□□□□ -1.92
CALD1-216ENST00000473714 TDHQ8IZJ6 230 aa3.06□□□□□ -1.92
CALD1-216ENST00000473714 GPC2Q8N158 579 aa3.06□□□□□ -1.92
CALD1-216ENST00000473714 TAB3Q8N5C8 712 aaPredicted RBP3.06□□□□□ -1.92
CALD1-216ENST00000473714 ZBTB38Q8NAP3 1195 aaPredicted RBP3.06□□□□□ -1.92
CALD1-216ENST00000473714 ATXN2LQ8WWM7 1075 aaKnown RBP3.06□□□□□ -1.92
CALD1-216ENST00000473714 PALLDQ8WX93 1383 aa3.06□□□□□ -1.92
CALD1-216ENST00000473714 JDP2Q8WYK2 163 aa3.06□□□□□ -1.92
CALD1-216ENST00000473714 ZNF669Q96BR6 464 aaPredicted RBP3.06□□□□□ -1.92
CALD1-216ENST00000473714 MFSD3Q96ES6 412 aa3.06□□□□□ -1.92
CALD1-216ENST00000473714 ZNF333Q96JL9 665 aa3.06□□□□□ -1.92
CALD1-216ENST00000473714 CCDC74BQ96LY2 380 aa3.06□□□□□ -1.92
CALD1-216ENST00000473714 SLC6A18Q96N87 628 aa3.06□□□□□ -1.92
CALD1-216ENST00000473714 PSMD1Q99460 953 aa3.06□□□□□ -1.92
CALD1-216ENST00000473714 CDX2Q99626 313 aaPredicted RBP3.06□□□□□ -1.92
CALD1-216ENST00000473714 KIF2CQ99661 725 aa3.06□□□□□ -1.92
CALD1-216ENST00000473714 CHMP4AQ9BY43 222 aa3.06□□□□□ -1.92
CALD1-216ENST00000473714 ZNF541Q9H0D2 1346 aa3.06□□□□□ -1.92
CALD1-216ENST00000473714 GBP3Q9H0R5 595 aa3.06□□□□□ -1.92
CALD1-216ENST00000473714 KCNH6Q9H252 994 aa3.06□□□□□ -1.92
CALD1-216ENST00000473714 CNNM2Q9H8M5 875 aa3.06□□□□□ -1.92
CALD1-216ENST00000473714 DDX56Q9NY93 547 aaKnown RBP3.06□□□□□ -1.92
CALD1-216ENST00000473714 KLHL42Q9P2K6 505 aa3.06□□□□□ -1.92
CALD1-216ENST00000473714 C11orf21Q9P2W6 132 aa3.06□□□□□ -1.92
CALD1-216ENST00000473714 MCM8Q9UJA3 840 aa3.06□□□□□ -1.92
CALD1-216ENST00000473714 FBXL21Q9UKT6 434 aa3.06□□□□□ -1.92
CALD1-216ENST00000473714 ZNF214Q9UL59 606 aaPredicted RBP3.06□□□□□ -1.92
CALD1-216ENST00000473714 TRIM17Q9Y577 477 aa3.06□□□□□ -1.92
CALD1-216ENST00000473714 LTN1O94822 1766 aa3.05□□□□□ -1.92
CALD1-216ENST00000473714 MON2Q7Z3U7 1717 aa3.05□□□□□ -1.92
CALD1-216ENST00000473714 VPS8Q8N3P4 1428 aa3.05□□□□□ -1.92
CALD1-216ENST00000473714 KMT2BQ9UMN6 2715 aaPredicted RBP3.05□□□□□ -1.92
CALD1-216ENST00000473714 MSL3P1P0C860 447 aa3.05□□□□□ -1.92
CALD1-216ENST00000473714 POLR2BP30876 1174 aaKnown RBP3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms