RNA–Protein interactions for RNA: ENST00000469498.1

GAPVD1-213, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 385 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-213ENST00000469498 PIGOQ8TEQ8 1089 aa9.37□□□□□ -0.91
GAPVD1-213ENST00000469498 PPP1R13LQ8WUF5 828 aa9.37□□□□□ -0.91
GAPVD1-213ENST00000469498 RAD54LQ92698 747 aa9.37□□□□□ -0.91
GAPVD1-213ENST00000469498 ZNF333Q96JL9 665 aa9.37□□□□□ -0.91
GAPVD1-213ENST00000469498 CCDC43Q96MW1 224 aaKnown RBP9.37□□□□□ -0.91
GAPVD1-213ENST00000469498 HSD17B14Q9BPX1 270 aa9.37□□□□□ -0.91
GAPVD1-213ENST00000469498 MCOLN1Q9GZU1 580 aa9.37□□□□□ -0.91
GAPVD1-213ENST00000469498 NT5C3AQ9H0P0 336 aa9.37□□□□□ -0.91
GAPVD1-213ENST00000469498 RNF208Q9H0X6 261 aa9.37□□□□□ -0.91
GAPVD1-213ENST00000469498 ZSWIM4Q9H7M6 989 aa9.37□□□□□ -0.91
GAPVD1-213ENST00000469498 SPC25Q9HBM1 224 aa9.37□□□□□ -0.91
GAPVD1-213ENST00000469498 BLOC1S4Q9NUP1 217 aa9.37□□□□□ -0.91
GAPVD1-213ENST00000469498 DACT1Q9NYF0 836 aa9.37□□□□□ -0.91
GAPVD1-213ENST00000469498 STK17AQ9UEE5 414 aa9.37□□□□□ -0.91
GAPVD1-213ENST00000469498 ATP4AP20648 1035 aa9.36□□□□□ -0.91
GAPVD1-213ENST00000469498 YWHABP31946 246 aaKnown RBP9.36□□□□□ -0.91
GAPVD1-213ENST00000469498 SNW1Q13573 536 aaKnown RBP9.36□□□□□ -0.91
GAPVD1-213ENST00000469498 MCM6Q14566 821 aa9.36□□□□□ -0.91
GAPVD1-213ENST00000469498 LONRF3Q496Y0 759 aa9.36□□□□□ -0.91
GAPVD1-213ENST00000469498 MTERF2Q49AM1 385 aa9.36□□□□□ -0.91
GAPVD1-213ENST00000469498 NAALADL2Q58DX5 795 aa9.36□□□□□ -0.91
GAPVD1-213ENST00000469498 GNASQ5JWF2 1037 aa9.36□□□□□ -0.91
GAPVD1-213ENST00000469498 C4orf19Q8IY42 314 aa9.36□□□□□ -0.91
GAPVD1-213ENST00000469498 GRAMD1CQ8IYS0 662 aa9.36□□□□□ -0.91
GAPVD1-213ENST00000469498 CEP57L1Q8IYX8 460 aa9.36□□□□□ -0.91
GAPVD1-213ENST00000469498 IQUBQ8NA54 791 aa9.36□□□□□ -0.91
GAPVD1-213ENST00000469498 AFAP1L1Q8TED9 768 aa9.36□□□□□ -0.91
GAPVD1-213ENST00000469498 NLRP7Q8WX94 980 aa9.36□□□□□ -0.91
GAPVD1-213ENST00000469498 LARP4BQ92615 738 aaKnown RBP9.36□□□□□ -0.91
GAPVD1-213ENST00000469498 STAMQ92783 540 aa9.36□□□□□ -0.91
GAPVD1-213ENST00000469498 ARMC5Q96C12 935 aa9.36□□□□□ -0.91
GAPVD1-213ENST00000469498 DEFB118Q96PH6 123 aa9.36□□□□□ -0.91
GAPVD1-213ENST00000469498 SH2D3AQ9BRG2 576 aa9.36□□□□□ -0.91
GAPVD1-213ENST00000469498 C16orf70Q9BSU1 422 aa9.36□□□□□ -0.91
GAPVD1-213ENST00000469498 SMARCAD1Q9H4L7 1026 aa9.36□□□□□ -0.91
GAPVD1-213ENST00000469498 PAK6Q9NQU5 681 aaPredicted RBP9.36□□□□□ -0.91
GAPVD1-213ENST00000469498 RABGEF1Q9UJ41 708 aa9.36□□□□□ -0.91
GAPVD1-213ENST00000469498 ZNF215Q9UL58 517 aaPredicted RBP9.36□□□□□ -0.91
GAPVD1-213ENST00000469498 MAFBQ9Y5Q3 323 aaPredicted RBP9.36□□□□□ -0.91
GAPVD1-213ENST00000469498 SCN5AQ14524 2016 aa9.36□□□□□ -0.91
GAPVD1-213ENST00000469498 ARHGEF35A5YM69 484 aa9.35□□□□□ -0.91
GAPVD1-213ENST00000469498 SMAPO00193 183 aa9.35□□□□□ -0.91
GAPVD1-213ENST00000469498 NRG2O14511 850 aaPredicted RBP9.35□□□□□ -0.91
GAPVD1-213ENST00000469498 ZEB2O60315 1214 aa9.35□□□□□ -0.91
GAPVD1-213ENST00000469498 USO1O60763 962 aaKnown RBP9.35□□□□□ -0.91
GAPVD1-213ENST00000469498 DKC1O60832 514 aaKnown RBP eCLIP9.35□□□□□ -0.91
GAPVD1-213ENST00000469498 PPFIA4O75335 1185 aa9.35□□□□□ -0.91
GAPVD1-213ENST00000469498 STBD1O95210 358 aa9.35□□□□□ -0.91
GAPVD1-213ENST00000469498 LYPLA2O95372 231 aa9.35□□□□□ -0.91
GAPVD1-213ENST00000469498 EYA4O95677 639 aa9.35□□□□□ -0.91
GAPVD1-213ENST00000469498 F2P00734 622 aa9.35□□□□□ -0.91
GAPVD1-213ENST00000469498 MUTP22033 750 aa9.35□□□□□ -0.91
GAPVD1-213ENST00000469498 CST5P28325 142 aaPredicted RBP9.35□□□□□ -0.91
GAPVD1-213ENST00000469498 AFMP43652 599 aa9.35□□□□□ -0.91
GAPVD1-213ENST00000469498 NPEPPSP55786 919 aa9.35□□□□□ -0.91
GAPVD1-213ENST00000469498 PURAQ00577 322 aaKnown RBP9.35□□□□□ -0.91
GAPVD1-213ENST00000469498 PLCB4Q15147 1175 aa9.35□□□□□ -0.91
GAPVD1-213ENST00000469498 LRRC41Q15345 812 aa9.35□□□□□ -0.91
GAPVD1-213ENST00000469498 XKR9Q5GH70 373 aa9.35□□□□□ -0.91
GAPVD1-213ENST00000469498 CAVIN1Q6NZI2 390 aaKnown RBP9.35□□□□□ -0.91
GAPVD1-213ENST00000469498 CXCL17Q6UXB2 119 aa9.35□□□□□ -0.91
GAPVD1-213ENST00000469498 KRBA2Q6ZNG9 492 aa9.35□□□□□ -0.91
GAPVD1-213ENST00000469498 ANO5Q75V66 913 aa9.35□□□□□ -0.91
GAPVD1-213ENST00000469498 PLPPR4Q7Z2D5 763 aa9.35□□□□□ -0.91
GAPVD1-213ENST00000469498 RNF180Q86T96 592 aa9.35□□□□□ -0.91
GAPVD1-213ENST00000469498 GPBP1Q86WP2 473 aa9.35□□□□□ -0.91
GAPVD1-213ENST00000469498 CNNM3Q8NE01 707 aa9.35□□□□□ -0.91
GAPVD1-213ENST00000469498 TRAPPC12Q8WVT3 735 aa9.35□□□□□ -0.91
GAPVD1-213ENST00000469498 KAT2BQ92831 832 aa9.35□□□□□ -0.91
GAPVD1-213ENST00000469498 FAM167AQ96KS9 214 aa9.35□□□□□ -0.91
GAPVD1-213ENST00000469498 NACC1Q96RE7 527 aa9.35□□□□□ -0.91
GAPVD1-213ENST00000469498 PYM1Q9BRP8 204 aaKnown RBP9.35□□□□□ -0.91
GAPVD1-213ENST00000469498 TMUB1Q9BVT8 246 aa9.35□□□□□ -0.91
GAPVD1-213ENST00000469498 REPIN1Q9BWE0 567 aaKnown RBP9.35□□□□□ -0.91
GAPVD1-213ENST00000469498 NUP62CLQ9H1M0 184 aa9.35□□□□□ -0.91
GAPVD1-213ENST00000469498 BHMT2Q9H2M3 363 aa9.35□□□□□ -0.91
GAPVD1-213ENST00000469498 ERAP1Q9NZ08 941 aa9.35□□□□□ -0.91
GAPVD1-213ENST00000469498 DNM3Q9UQ16 869 aa9.35□□□□□ -0.91
GAPVD1-213ENST00000469498 HTTP42858 3142 aa9.35□□□□□ -0.91
GAPVD1-213ENST00000469498 KBTBD13C9JR72 458 aa9.34□□□□□ -0.91
GAPVD1-213ENST00000469498 H3BRB1 525 aa9.34□□□□□ -0.91
GAPVD1-213ENST00000469498 TRAK2O60296 914 aa9.34□□□□□ -0.91
GAPVD1-213ENST00000469498 ASGR1P07306 291 aa9.34□□□□□ -0.91
GAPVD1-213ENST00000469498 SLFN14P0C7P3 912 aa9.34□□□□□ -0.91
GAPVD1-213ENST00000469498 PLA2G4BP0C869 781 aa9.34□□□□□ -0.91
GAPVD1-213ENST00000469498 CASP1P29466 404 aa9.34□□□□□ -0.91
GAPVD1-213ENST00000469498 IGBP1P78318 339 aa9.34□□□□□ -0.91
GAPVD1-213ENST00000469498 NKX3-2P78367 333 aa9.34□□□□□ -0.91
GAPVD1-213ENST00000469498 RAD51AP2Q09MP3 1159 aa9.34□□□□□ -0.91
GAPVD1-213ENST00000469498 PNOCQ13519 176 aa9.34□□□□□ -0.91
GAPVD1-213ENST00000469498 KCNA10Q16322 511 aa9.34□□□□□ -0.91
GAPVD1-213ENST00000469498 CAMK4Q16566 473 aa9.34□□□□□ -0.91
GAPVD1-213ENST00000469498 KIAA0753Q2KHM9 967 aa9.34□□□□□ -0.91
GAPVD1-213ENST00000469498 KLHL40Q2TBA0 621 aa9.34□□□□□ -0.91
GAPVD1-213ENST00000469498 XKR3Q5GH77 459 aa9.34□□□□□ -0.91
GAPVD1-213ENST00000469498 PCSK9Q8NBP7 692 aaKnown RBP9.34□□□□□ -0.91
GAPVD1-213ENST00000469498 KLHDC9Q8NEP7 349 aa9.34□□□□□ -0.91
GAPVD1-213ENST00000469498 ATP8B4Q8TF62 1192 aa9.34□□□□□ -0.91
GAPVD1-213ENST00000469498 ERCC4Q92889 916 aaPredicted RBP9.34□□□□□ -0.91
GAPVD1-213ENST00000469498 MTG1Q9BT17 334 aaPredicted RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms