RNA–Protein interactions for RNA: ENST00000469043.1

SCFD1-205, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-205ENST00000469043 EXTL1Q92935 676 aa5.91□□□□□ -1.46
SCFD1-205ENST00000469043 IL17RAQ96F46 866 aa5.91□□□□□ -1.46
SCFD1-205ENST00000469043 FAM126AQ9BYI3 521 aaPredicted RBP5.91□□□□□ -1.46
SCFD1-205ENST00000469043 SLC39A2Q9NP94 309 aa5.91□□□□□ -1.46
SCFD1-205ENST00000469043 OAZ3Q9UMX2 235 aa5.91□□□□□ -1.46
SCFD1-205ENST00000469043 WDR33Q9C0J8 1336 aaKnown RBP5.91□□□□□ -1.46
SCFD1-205ENST00000469043 CDC14BO60729 498 aa5.9□□□□□ -1.46
SCFD1-205ENST00000469043 ZNF202O95125 648 aa5.9□□□□□ -1.46
SCFD1-205ENST00000469043 EPHB1P54762 984 aa5.9□□□□□ -1.46
SCFD1-205ENST00000469043 PTH1RQ03431 593 aa5.9□□□□□ -1.46
SCFD1-205ENST00000469043 TOP3AQ13472 1001 aaPredicted RBP5.9□□□□□ -1.46
SCFD1-205ENST00000469043 PPP2R5AQ15172 486 aa5.9□□□□□ -1.46
SCFD1-205ENST00000469043 RNF151Q2KHN1 245 aa5.9□□□□□ -1.46
SCFD1-205ENST00000469043 PPP4R4Q6NUP7 873 aa5.9□□□□□ -1.46
SCFD1-205ENST00000469043 EP400NLQ6ZTU2 488 aa5.9□□□□□ -1.46
SCFD1-205ENST00000469043 THAP3Q8WTV1 239 aaPredicted RBP5.9□□□□□ -1.46
SCFD1-205ENST00000469043 CHAC2Q8WUX2 184 aa5.9□□□□□ -1.46
SCFD1-205ENST00000469043 C12orf65Q9H3J6 166 aaKnown RBP5.9□□□□□ -1.46
SCFD1-205ENST00000469043 IPPKQ9H8X2 491 aa5.9□□□□□ -1.46
SCFD1-205ENST00000469043 ARHGAP28Q9P2N2 729 aa5.9□□□□□ -1.46
SCFD1-205ENST00000469043 C11orf21Q9P2W6 132 aa5.9□□□□□ -1.46
SCFD1-205ENST00000469043 PLAAQ9Y263 795 aa5.9□□□□□ -1.46
SCFD1-205ENST00000469043 NR2E1Q9Y466 385 aa5.9□□□□□ -1.46
SCFD1-205ENST00000469043 CD2APQ9Y5K6 639 aa5.9□□□□□ -1.46
SCFD1-205ENST00000469043 TRAV20A0A0B4J274 112 aa5.89□□□□□ -1.47
SCFD1-205ENST00000469043 ALG1L2C9J202 215 aa5.89□□□□□ -1.47
SCFD1-205ENST00000469043 KCNQ2O43526 872 aa5.89□□□□□ -1.47
SCFD1-205ENST00000469043 RPS19P39019 145 aaKnown RBP5.89□□□□□ -1.47
SCFD1-205ENST00000469043 RRADP55042 308 aa5.89□□□□□ -1.47
SCFD1-205ENST00000469043 FOXD4Q12950 439 aaPredicted RBP5.89□□□□□ -1.47
SCFD1-205ENST00000469043 DHX8Q14562 1220 aaKnown RBP5.89□□□□□ -1.47
SCFD1-205ENST00000469043 BRD3Q15059 726 aa5.89□□□□□ -1.47
SCFD1-205ENST00000469043 TTF1Q15361 905 aaPredicted RBP5.89□□□□□ -1.47
SCFD1-205ENST00000469043 NTRK3Q16288 839 aa5.89□□□□□ -1.47
SCFD1-205ENST00000469043 C21orf62-AS1Q17RA5 79 aa5.89□□□□□ -1.47
SCFD1-205ENST00000469043 WDR72Q3MJ13 1102 aa5.89□□□□□ -1.47
SCFD1-205ENST00000469043 MTERF2Q49AM1 385 aa5.89□□□□□ -1.47
SCFD1-205ENST00000469043 SYCP2LQ5T4T6 812 aa5.89□□□□□ -1.47
SCFD1-205ENST00000469043 Q6ZSN1 163 aa5.89□□□□□ -1.47
SCFD1-205ENST00000469043 DDX42Q86XP3 938 aaKnown RBP eCLIP5.89□□□□□ -1.47
SCFD1-205ENST00000469043 C1orf210Q8IVY1 113 aa5.89□□□□□ -1.47
SCFD1-205ENST00000469043 TMTC2Q8N394 836 aa5.89□□□□□ -1.47
SCFD1-205ENST00000469043 SYNPOQ8N3V7 929 aa5.89□□□□□ -1.47
SCFD1-205ENST00000469043 OSBP2Q969R2 916 aa5.89□□□□□ -1.47
SCFD1-205ENST00000469043 PTCH2Q9Y6C5 1203 aa5.89□□□□□ -1.47
SCFD1-205ENST00000469043 SLC30A1Q9Y6M5 507 aa5.89□□□□□ -1.47
SCFD1-205ENST00000469043 KDM2BQ8NHM5 1336 aa5.89□□□□□ -1.47
SCFD1-205ENST00000469043 MYL1P05976 194 aa5.88□□□□□ -1.47
SCFD1-205ENST00000469043 POU3F3P20264 500 aaPredicted RBP5.88□□□□□ -1.47
SCFD1-205ENST00000469043 ETV4P43268 484 aa5.88□□□□□ -1.47
SCFD1-205ENST00000469043 CLEC4GQ6UXB4 293 aa5.88□□□□□ -1.47
SCFD1-205ENST00000469043 CXXC5Q7LFL8 322 aaKnown RBP5.88□□□□□ -1.47
SCFD1-205ENST00000469043 LRRC47Q8N1G4 583 aaKnown RBP5.88□□□□□ -1.47
SCFD1-205ENST00000469043 SAMD3Q8N6K7 520 aa5.88□□□□□ -1.47
SCFD1-205ENST00000469043 WDR48Q8TAF3 677 aa5.88□□□□□ -1.47
SCFD1-205ENST00000469043 CHFRQ96EP1 664 aa5.88□□□□□ -1.47
SCFD1-205ENST00000469043 SLC39A13Q96H72 371 aa5.88□□□□□ -1.47
SCFD1-205ENST00000469043 OR14A2Q96R54 314 aa5.88□□□□□ -1.47
SCFD1-205ENST00000469043 CD244Q9BZW8 370 aa5.88□□□□□ -1.47
SCFD1-205ENST00000469043 ARNT2Q9HBZ2 717 aa5.88□□□□□ -1.47
SCFD1-205ENST00000469043 ARHGEF4Q9NR80 690 aa5.88□□□□□ -1.47
SCFD1-205ENST00000469043 RIC8BQ9NVN3 520 aa5.88□□□□□ -1.47
SCFD1-205ENST00000469043 SFMBT1Q9UHJ3 866 aa5.88□□□□□ -1.47
SCFD1-205ENST00000469043 PUF60Q9UHX1 559 aaKnown RBP5.88□□□□□ -1.47
SCFD1-205ENST00000469043 FBXO10Q9UK96 956 aa5.88□□□□□ -1.47
SCFD1-205ENST00000469043 BLACEA4D250 179 aa5.87□□□□□ -1.47
SCFD1-205ENST00000469043 NARSO43776 548 aaKnown RBP5.87□□□□□ -1.47
SCFD1-205ENST00000469043 MYCLP1P12525 358 aaPredicted RBP5.87□□□□□ -1.47
SCFD1-205ENST00000469043 PTPN1P18031 435 aaKnown RBP5.87□□□□□ -1.47
SCFD1-205ENST00000469043 ATF3P18847 181 aa5.87□□□□□ -1.47
SCFD1-205ENST00000469043 STAT3P40763 770 aa5.87□□□□□ -1.47
SCFD1-205ENST00000469043 DPTQ07507 201 aa5.87□□□□□ -1.47
SCFD1-205ENST00000469043 NOLC1Q14978 699 aaKnown RBP eCLIP5.87□□□□□ -1.47
SCFD1-205ENST00000469043 LRRC41Q15345 812 aa5.87□□□□□ -1.47
SCFD1-205ENST00000469043 ZRSR2Q15696 482 aaKnown RBP5.87□□□□□ -1.47
SCFD1-205ENST00000469043 GPR19Q15760 415 aa5.87□□□□□ -1.47
SCFD1-205ENST00000469043 VPS72Q15906 364 aa5.87□□□□□ -1.47
SCFD1-205ENST00000469043 SMN1Q16637 294 aaKnown RBP5.87□□□□□ -1.47
SCFD1-205ENST00000469043 CT47A1Q5JQC4 288 aaPredicted RBP5.87□□□□□ -1.47
SCFD1-205ENST00000469043 MAMDC4Q6UXC1 1216 aa5.87□□□□□ -1.47
SCFD1-205ENST00000469043 AMER2Q8N7J2 671 aa5.87□□□□□ -1.47
SCFD1-205ENST00000469043 JMYQ8N9B5 988 aa5.87□□□□□ -1.47
SCFD1-205ENST00000469043 ST13P5Q8NFI4 369 aaPredicted RBP5.87□□□□□ -1.47
SCFD1-205ENST00000469043 PLEKHG4BQ96PX9 1271 aa5.87□□□□□ -1.47
SCFD1-205ENST00000469043 DPYSL5Q9BPU6 564 aa5.87□□□□□ -1.47
SCFD1-205ENST00000469043 ZDHHC5Q9C0B5 715 aa5.87□□□□□ -1.47
SCFD1-205ENST00000469043 MSL2Q9HCI7 577 aa5.87□□□□□ -1.47
SCFD1-205ENST00000469043 PFDN2Q9UHV9 154 aa5.87□□□□□ -1.47
SCFD1-205ENST00000469043 MCM8Q9UJA3 840 aa5.87□□□□□ -1.47
SCFD1-205ENST00000469043 WASHC2CQ9Y4E1 1318 aa5.86□□□□□ -1.47
SCFD1-205ENST00000469043 IFRD1O00458 451 aaPredicted RBP5.86□□□□□ -1.47
SCFD1-205ENST00000469043 AQP7O14520 342 aa5.86□□□□□ -1.47
SCFD1-205ENST00000469043 PLSCR1O15162 318 aa5.86□□□□□ -1.47
SCFD1-205ENST00000469043 ARHGAP6O43182 974 aa5.86□□□□□ -1.47
SCFD1-205ENST00000469043 SCGB1D2O95969 90 aa5.86□□□□□ -1.47
SCFD1-205ENST00000469043 HMGCRP04035 888 aa5.86□□□□□ -1.47
SCFD1-205ENST00000469043 GJA4P35212 333 aa5.86□□□□□ -1.47
SCFD1-205ENST00000469043 PAK1Q13153 545 aa5.86□□□□□ -1.47
SCFD1-205ENST00000469043 NFYCQ13952 458 aa5.86□□□□□ -1.47
SCFD1-205ENST00000469043 TM4SF20Q53R12 229 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms