RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 PCYT2Q99447 389 aa9.03□□□□□ -0.96
HDAC6-216ENST00000468949 ZHX3Q9H4I2 956 aa9.03□□□□□ -0.96
HDAC6-216ENST00000468949 ATP6V0A4Q9HBG4 840 aa9.03□□□□□ -0.96
HDAC6-216ENST00000468949 STARD7Q9NQZ5 370 aa9.03□□□□□ -0.96
HDAC6-216ENST00000468949 CYP26B1Q9NR63 512 aa9.03□□□□□ -0.96
HDAC6-216ENST00000468949 KCND2Q9NZV8 630 aa9.03□□□□□ -0.96
HDAC6-216ENST00000468949 DBR1Q9UK59 544 aaKnown RBP9.03□□□□□ -0.96
HDAC6-216ENST00000468949 NOD1Q9Y239 953 aa9.03□□□□□ -0.96
HDAC6-216ENST00000468949 TELO2Q9Y4R8 837 aa9.03□□□□□ -0.96
HDAC6-216ENST00000468949 DOCK5Q9H7D0 1870 aa9.02□□□□□ -0.96
HDAC6-216ENST00000468949 COL1A2P08123 1366 aa9.02□□□□□ -0.97
HDAC6-216ENST00000468949 A0A087X0B3 334 aa9.02□□□□□ -0.97
HDAC6-216ENST00000468949 A0A0U1RQG5 324 aaPredicted RBP9.02□□□□□ -0.97
HDAC6-216ENST00000468949 A0A1W2PQ45 241 aaPredicted RBP9.02□□□□□ -0.97
HDAC6-216ENST00000468949 A0A1W2PQY0 241 aa9.02□□□□□ -0.97
HDAC6-216ENST00000468949 C17orf102A2RUQ5 167 aa9.02□□□□□ -0.97
HDAC6-216ENST00000468949 RRN3P2A6NIE6 340 aa9.02□□□□□ -0.97
HDAC6-216ENST00000468949 ACTN4O43707 911 aaKnown RBP9.02□□□□□ -0.97
HDAC6-216ENST00000468949 GAS2O43903 313 aaKnown RBP9.02□□□□□ -0.97
HDAC6-216ENST00000468949 ZNF862O60290 1169 aa9.02□□□□□ -0.97
HDAC6-216ENST00000468949 TRAK2O60296 914 aa9.02□□□□□ -0.97
HDAC6-216ENST00000468949 DGAT1O75907 488 aa9.02□□□□□ -0.97
HDAC6-216ENST00000468949 FAM13AO94988 1023 aa9.02□□□□□ -0.97
HDAC6-216ENST00000468949 MYL1P05976 194 aa9.02□□□□□ -0.97
HDAC6-216ENST00000468949 SMIM10L2AP0DMW4 78 aa9.02□□□□□ -0.97
HDAC6-216ENST00000468949 SMIM10L2BP0DMW5 78 aa9.02□□□□□ -0.97
HDAC6-216ENST00000468949 IDEP14735 1019 aa9.02□□□□□ -0.97
HDAC6-216ENST00000468949 TMOD1P28289 359 aa9.02□□□□□ -0.97
HDAC6-216ENST00000468949 RARRES1P49788 294 aa9.02□□□□□ -0.97
HDAC6-216ENST00000468949 DNM2P50570 870 aa9.02□□□□□ -0.97
HDAC6-216ENST00000468949 ACLYP53396 1101 aa9.02□□□□□ -0.97
HDAC6-216ENST00000468949 NKX3-2P78367 333 aa9.02□□□□□ -0.97
HDAC6-216ENST00000468949 GRIK4Q16099 956 aa9.02□□□□□ -0.97
HDAC6-216ENST00000468949 E2F4Q16254 413 aa9.02□□□□□ -0.97
HDAC6-216ENST00000468949 CAMK4Q16566 473 aa9.02□□□□□ -0.97
HDAC6-216ENST00000468949 ECM1Q16610 540 aa9.02□□□□□ -0.97
HDAC6-216ENST00000468949 PADI6Q6TGC4 694 aa9.02□□□□□ -0.97
HDAC6-216ENST00000468949 C7orf61Q8IZ16 206 aa9.02□□□□□ -0.97
HDAC6-216ENST00000468949 MCPH1Q8NEM0 835 aa9.02□□□□□ -0.97
HDAC6-216ENST00000468949 KLHDC9Q8NEP7 349 aa9.02□□□□□ -0.97
HDAC6-216ENST00000468949 GPT2Q8TD30 523 aa9.02□□□□□ -0.97
HDAC6-216ENST00000468949 DRC1Q96MC2 740 aa9.02□□□□□ -0.97
HDAC6-216ENST00000468949 SCLT1Q96NL6 688 aa9.02□□□□□ -0.97
HDAC6-216ENST00000468949 MAP7D2Q96T17 732 aa9.02□□□□□ -0.97
HDAC6-216ENST00000468949 MTRQ99707 1265 aa9.02□□□□□ -0.97
HDAC6-216ENST00000468949 C16orf70Q9BSU1 422 aa9.02□□□□□ -0.97
HDAC6-216ENST00000468949 TIPINQ9BVW5 301 aa9.02□□□□□ -0.97
HDAC6-216ENST00000468949 EXOC1Q9NV70 894 aa9.02□□□□□ -0.97
HDAC6-216ENST00000468949 WRAP73Q9P2S5 460 aaPredicted RBP9.02□□□□□ -0.97
HDAC6-216ENST00000468949 NRCAMQ92823 1304 aa9.02□□□□□ -0.97
HDAC6-216ENST00000468949 LTBP2Q14767 1821 aa9.01□□□□□ -0.97
HDAC6-216ENST00000468949 TMEM150BA6NC51 233 aa9.01□□□□□ -0.97
HDAC6-216ENST00000468949 MAGEB2O15479 319 aa9.01□□□□□ -0.97
HDAC6-216ENST00000468949 INSRRP14616 1297 aa9.01□□□□□ -0.97
HDAC6-216ENST00000468949 SLC12A3P55017 1021 aa9.01□□□□□ -0.97
HDAC6-216ENST00000468949 NPEPPSP55786 919 aa9.01□□□□□ -0.97
HDAC6-216ENST00000468949 PSMC6P62333 389 aa9.01□□□□□ -0.97
HDAC6-216ENST00000468949 IRX5P78411 483 aaPredicted RBP9.01□□□□□ -0.97
HDAC6-216ENST00000468949 RAD51AP2Q09MP3 1159 aa9.01□□□□□ -0.97
HDAC6-216ENST00000468949 SNW1Q13573 536 aaKnown RBP9.01□□□□□ -0.97
HDAC6-216ENST00000468949 EMC2Q15006 297 aa9.01□□□□□ -0.97
HDAC6-216ENST00000468949 LONRF3Q496Y0 759 aa9.01□□□□□ -0.97
HDAC6-216ENST00000468949 FAM102BQ5T8I3 360 aa9.01□□□□□ -0.97
HDAC6-216ENST00000468949 POTEHQ6S545 545 aa9.01□□□□□ -0.97
HDAC6-216ENST00000468949 ANO5Q75V66 913 aa9.01□□□□□ -0.97
HDAC6-216ENST00000468949 MAEAQ7L5Y9 396 aa9.01□□□□□ -0.97
HDAC6-216ENST00000468949 DYMQ7RTS9 669 aa9.01□□□□□ -0.97
HDAC6-216ENST00000468949 KCNK18Q7Z418 384 aa9.01□□□□□ -0.97
HDAC6-216ENST00000468949 CCDC65Q8IXS2 484 aa9.01□□□□□ -0.97
HDAC6-216ENST00000468949 METTL13Q8N6R0 699 aa9.01□□□□□ -0.97
HDAC6-216ENST00000468949 SYT2Q8N9I0 419 aaPredicted RBP9.01□□□□□ -0.97
HDAC6-216ENST00000468949 ENGASEQ8NFI3 743 aa9.01□□□□□ -0.97
HDAC6-216ENST00000468949 TCP11Q8WWU5 503 aa9.01□□□□□ -0.97
HDAC6-216ENST00000468949 DDX12PQ92771 950 aa9.01□□□□□ -0.97
HDAC6-216ENST00000468949 STAMQ92783 540 aa9.01□□□□□ -0.97
HDAC6-216ENST00000468949 SMARCE1Q969G3 411 aa9.01□□□□□ -0.97
HDAC6-216ENST00000468949 PAGE5Q96GU1 130 aa9.01□□□□□ -0.97
HDAC6-216ENST00000468949 IFT74Q96LB3 600 aa9.01□□□□□ -0.97
HDAC6-216ENST00000468949 SH2D3AQ9BRG2 576 aa9.01□□□□□ -0.97
HDAC6-216ENST00000468949 NIFKQ9BYG3 293 aaKnown RBP9.01□□□□□ -0.97
HDAC6-216ENST00000468949 CLSTN2Q9H4D0 955 aa9.01□□□□□ -0.97
HDAC6-216ENST00000468949 BLOC1S4Q9NUP1 217 aa9.01□□□□□ -0.97
HDAC6-216ENST00000468949 RMND1Q9NWS8 449 aa9.01□□□□□ -0.97
HDAC6-216ENST00000468949 TUBE1Q9UJT0 475 aa9.01□□□□□ -0.97
HDAC6-216ENST00000468949 MROH7Q68CQ1 1323 aa9.01□□□□□ -0.97
HDAC6-216ENST00000468949 A0A087WWV3 80 aa9□□□□□ -0.97
HDAC6-216ENST00000468949 M0QZ92 97 aa9□□□□□ -0.97
HDAC6-216ENST00000468949 ZBTB39O15060 712 aa9□□□□□ -0.97
HDAC6-216ENST00000468949 TLR3O15455 904 aaKnown RBP9□□□□□ -0.97
HDAC6-216ENST00000468949 LETM1O95202 739 aaPredicted RBP9□□□□□ -0.97
HDAC6-216ENST00000468949 CYP11B2P19099 503 aa9□□□□□ -0.97
HDAC6-216ENST00000468949 DMP1Q13316 513 aaPredicted RBP9□□□□□ -0.97
HDAC6-216ENST00000468949 ITGA7Q13683 1181 aa9□□□□□ -0.97
HDAC6-216ENST00000468949 PPP2R5AQ15172 486 aa9□□□□□ -0.97
HDAC6-216ENST00000468949 LRRC26Q2I0M4 334 aa9□□□□□ -0.97
HDAC6-216ENST00000468949 NBPF20Q3BBV1 942 aa9□□□□□ -0.97
HDAC6-216ENST00000468949 NAALADL2Q58DX5 795 aa9□□□□□ -0.97
HDAC6-216ENST00000468949 NFRKBQ6P4R8 1299 aa9□□□□□ -0.97
HDAC6-216ENST00000468949 STXBP4Q6ZWJ1 553 aa9□□□□□ -0.97
HDAC6-216ENST00000468949 RSPH3Q86UC2 560 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms