RNA–Protein interactions for RNA: ENST00000465627.5

UBA3-208, Transcript of ubiquitin like modifier activating enzyme 3, human

TSL 2

Gene UBA3, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA3-208	ENST00000465627	PDE4D	Q08499	809 aa		9.83	□□□□□ -0.84
UBA3-208	ENST00000465627	UGCG	Q16739	394 aa		9.83	□□□□□ -0.84
UBA3-208	ENST00000465627	UVSSA	Q2YD98	709 aa		9.83	□□□□□ -0.84
UBA3-208	ENST00000465627	COBLL1	Q53SF7	1204 aa		9.83	□□□□□ -0.84
UBA3-208	ENST00000465627	SV2B	Q7L1I2	683 aa		9.83	□□□□□ -0.84
UBA3-208	ENST00000465627	ARMCX2	Q7L311	632 aa		9.83	□□□□□ -0.84
UBA3-208	ENST00000465627	NPLOC4	Q8TAT6	608 aa		9.83	□□□□□ -0.84
UBA3-208	ENST00000465627	CCDC34	Q96HJ3	373 aa		9.83	□□□□□ -0.84
UBA3-208	ENST00000465627	MAML3	Q96JK9	1138 aa		9.83	□□□□□ -0.84
UBA3-208	ENST00000465627	ZFYVE28	Q9HCC9	887 aa		9.83	□□□□□ -0.84
UBA3-208	ENST00000465627	PKD2L1	Q9P0L9	805 aa		9.83	□□□□□ -0.84
UBA3-208	ENST00000465627	XIRP2	A4UGR9	3374 aa		9.83	□□□□□ -0.84
UBA3-208	ENST00000465627	PVALEF	A0A1B0GWK0	134 aa		9.82	□□□□□ -0.84
UBA3-208	ENST00000465627	GSTTP1	A0A1W2PQM5	241 aa		9.82	□□□□□ -0.84
UBA3-208	ENST00000465627	ASB14	A6NK59	587 aa		9.82	□□□□□ -0.84
UBA3-208	ENST00000465627		B4DLN1	442 aa		9.82	□□□□□ -0.84
UBA3-208	ENST00000465627	DDX39A	O00148	427 aa	Known RBP	9.82	□□□□□ -0.84
UBA3-208	ENST00000465627	ZBTB39	O15060	712 aa		9.82	□□□□□ -0.84
UBA3-208	ENST00000465627	AP5Z1	O43299	807 aa		9.82	□□□□□ -0.84
UBA3-208	ENST00000465627	CHMP2A	O43633	222 aa		9.82	□□□□□ -0.84
UBA3-208	ENST00000465627	ZNF862	O60290	1169 aa		9.82	□□□□□ -0.84
UBA3-208	ENST00000465627	ZNF165	P49910	485 aa		9.82	□□□□□ -0.84
UBA3-208	ENST00000465627	JAK3	P52333	1124 aa		9.82	□□□□□ -0.84
UBA3-208	ENST00000465627	MAP2K5	Q13163	448 aa		9.82	□□□□□ -0.84
UBA3-208	ENST00000465627	IRF5	Q13568	498 aa		9.82	□□□□□ -0.84
UBA3-208	ENST00000465627	CTTN	Q14247	550 aa	Known RBP	9.82	□□□□□ -0.84
UBA3-208	ENST00000465627	ZRSR1	Q15695	479 aa	Known RBP	9.82	□□□□□ -0.84
UBA3-208	ENST00000465627	KMT5B	Q4FZB7	885 aa		9.82	□□□□□ -0.84
UBA3-208	ENST00000465627	CT47A1	Q5JQC4	288 aa	Predicted RBP	9.82	□□□□□ -0.84
UBA3-208	ENST00000465627	TMEM63B	Q5T3F8	832 aa		9.82	□□□□□ -0.84
UBA3-208	ENST00000465627	C1orf186	Q6ZWK4	172 aa		9.82	□□□□□ -0.84
UBA3-208	ENST00000465627	MIER3	Q7Z3K6	550 aa		9.82	□□□□□ -0.84
UBA3-208	ENST00000465627	C4orf19	Q8IY42	314 aa		9.82	□□□□□ -0.84
UBA3-208	ENST00000465627	SMAP1	Q8IYB5	467 aa	Predicted RBP	9.82	□□□□□ -0.84
UBA3-208	ENST00000465627	MSL3	Q8N5Y2	521 aa	Known RBP	9.82	□□□□□ -0.84
UBA3-208	ENST00000465627	MLKL	Q8NB16	471 aa		9.82	□□□□□ -0.84
UBA3-208	ENST00000465627	RNF214	Q8ND24	703 aa		9.82	□□□□□ -0.84
UBA3-208	ENST00000465627	GIMAP8	Q8ND71	665 aa	Predicted RBP	9.82	□□□□□ -0.84
UBA3-208	ENST00000465627	DDX12P	Q92771	950 aa		9.82	□□□□□ -0.84
UBA3-208	ENST00000465627	CDK5RAP3	Q96JB5	506 aa		9.82	□□□□□ -0.84
UBA3-208	ENST00000465627	PCYT2	Q99447	389 aa		9.82	□□□□□ -0.84
UBA3-208	ENST00000465627	LXN	Q9BS40	222 aa		9.82	□□□□□ -0.84
UBA3-208	ENST00000465627	JPH1	Q9HDC5	661 aa	Predicted RBP	9.82	□□□□□ -0.84
UBA3-208	ENST00000465627	SLC9A2	Q9UBY0	812 aa		9.82	□□□□□ -0.84
UBA3-208	ENST00000465627	RABGEF1	Q9UJ41	708 aa		9.82	□□□□□ -0.84
UBA3-208	ENST00000465627	DBR1	Q9UK59	544 aa	Known RBP	9.82	□□□□□ -0.84
UBA3-208	ENST00000465627	DNM3	Q9UQ16	869 aa		9.82	□□□□□ -0.84
UBA3-208	ENST00000465627	PCDHGA10	Q9Y5H3	936 aa		9.82	□□□□□ -0.84
UBA3-208	ENST00000465627	PCDHA2	Q9Y5H9	948 aa		9.82	□□□□□ -0.84
UBA3-208	ENST00000465627	UNC79	Q9P2D8	2635 aa		9.82	□□□□□ -0.84
UBA3-208	ENST00000465627	IGSF9B	Q9UPX0	1349 aa		9.82	□□□□□ -0.84
UBA3-208	ENST00000465627	CHD6	Q8TD26	2715 aa		9.81	□□□□□ -0.84
UBA3-208	ENST00000465627	MYH9	P35579	1960 aa	Known RBP	9.81	□□□□□ -0.84
UBA3-208	ENST00000465627	IKBKB	O14920	756 aa		9.81	□□□□□ -0.84
UBA3-208	ENST00000465627	ATP4A	P20648	1035 aa		9.81	□□□□□ -0.84
UBA3-208	ENST00000465627	QARS	P47897	775 aa	Known RBP	9.81	□□□□□ -0.84
UBA3-208	ENST00000465627	ACTR2	P61160	394 aa		9.81	□□□□□ -0.84
UBA3-208	ENST00000465627	AMPD3	Q01432	767 aa		9.81	□□□□□ -0.84
UBA3-208	ENST00000465627	ZNF658	Q5TYW1	1059 aa	Predicted RBP	9.81	□□□□□ -0.84
UBA3-208	ENST00000465627	WDR78	Q5VTH9	848 aa		9.81	□□□□□ -0.84
UBA3-208	ENST00000465627	ISM2	Q6H9L7	571 aa		9.81	□□□□□ -0.84
UBA3-208	ENST00000465627	KCNV1	Q6PIU1	500 aa		9.81	□□□□□ -0.84
UBA3-208	ENST00000465627	SEPT14	Q6ZU15	432 aa		9.81	□□□□□ -0.84
UBA3-208	ENST00000465627	UNC13D	Q70J99	1090 aa		9.81	□□□□□ -0.84
UBA3-208	ENST00000465627	LUZP1	Q86V48	1076 aa		9.81	□□□□□ -0.84
UBA3-208	ENST00000465627	CCDC60	Q8IWA6	550 aa	Predicted RBP	9.81	□□□□□ -0.84
UBA3-208	ENST00000465627	TPH2	Q8IWU9	490 aa		9.81	□□□□□ -0.84
UBA3-208	ENST00000465627	FBXO16	Q8IX29	292 aa	Predicted RBP	9.81	□□□□□ -0.84
UBA3-208	ENST00000465627	KIAA0895	Q8NCT3	520 aa		9.81	□□□□□ -0.84
UBA3-208	ENST00000465627	BANK1	Q8NDB2	785 aa		9.81	□□□□□ -0.84
UBA3-208	ENST00000465627	ANKK1	Q8NFD2	765 aa		9.81	□□□□□ -0.84
UBA3-208	ENST00000465627	RASSF8	Q8NHQ8	419 aa		9.81	□□□□□ -0.84
UBA3-208	ENST00000465627	NACC1	Q96RE7	527 aa		9.81	□□□□□ -0.84
UBA3-208	ENST00000465627	CEP89	Q96ST8	783 aa		9.81	□□□□□ -0.84
UBA3-208	ENST00000465627	RUSC1	Q9BVN2	902 aa		9.81	□□□□□ -0.84
UBA3-208	ENST00000465627	ZSWIM4	Q9H7M6	989 aa		9.81	□□□□□ -0.84
UBA3-208	ENST00000465627	VTA1	Q9NP79	307 aa		9.81	□□□□□ -0.84
UBA3-208	ENST00000465627	PDGFC	Q9NRA1	345 aa		9.81	□□□□□ -0.84
UBA3-208	ENST00000465627	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	9.81	□□□□□ -0.84
UBA3-208	ENST00000465627	FLRT1	Q9NZU1	646 aa		9.81	□□□□□ -0.84
UBA3-208	ENST00000465627	THEG	Q9P2T0	379 aa		9.81	□□□□□ -0.84
UBA3-208	ENST00000465627	PCDHA10	Q9Y5I2	948 aa		9.81	□□□□□ -0.84
UBA3-208	ENST00000465627	MAFB	Q9Y5Q3	323 aa	Predicted RBP	9.81	□□□□□ -0.84
UBA3-208	ENST00000465627	IVNS1ABP	Q9Y6Y0	642 aa		9.81	□□□□□ -0.84
UBA3-208	ENST00000465627	SETX	Q7Z333	2677 aa	Known RBP	9.8	□□□□□ -0.84
UBA3-208	ENST00000465627	LGR5	O75473	907 aa		9.8	□□□□□ -0.84
UBA3-208	ENST00000465627	SUPT20HL2	P0C7V6	817 aa		9.8	□□□□□ -0.84
UBA3-208	ENST00000465627	ERCC5	P28715	1186 aa	Predicted RBP	9.8	□□□□□ -0.84
UBA3-208	ENST00000465627	RARRES1	P49788	294 aa		9.8	□□□□□ -0.84
UBA3-208	ENST00000465627	ZNF131	P52739	623 aa		9.8	□□□□□ -0.84
UBA3-208	ENST00000465627	PSMC5	P62195	406 aa		9.8	□□□□□ -0.84
UBA3-208	ENST00000465627	MRPS5	P82675	430 aa	Known RBP	9.8	□□□□□ -0.84
UBA3-208	ENST00000465627	LACTB	P83111	547 aa	Predicted RBP	9.8	□□□□□ -0.84
UBA3-208	ENST00000465627	ARHGAP1	Q07960	439 aa		9.8	□□□□□ -0.84
UBA3-208	ENST00000465627	STK4	Q13043	487 aa		9.8	□□□□□ -0.84
UBA3-208	ENST00000465627	MAPK7	Q13164	816 aa		9.8	□□□□□ -0.84
UBA3-208	ENST00000465627	GIT2	Q14161	759 aa		9.8	□□□□□ -0.84
UBA3-208	ENST00000465627	NEDD9	Q14511	834 aa		9.8	□□□□□ -0.84
UBA3-208	ENST00000465627	LY6K	Q17RY6	165 aa		9.8	□□□□□ -0.84
UBA3-208	ENST00000465627	CELF3	Q5SZQ8	465 aa	Known RBP	9.8	□□□□□ -0.84

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