RNA–Protein interactions for RNA: ENST00000465167.1

SSBP1-204, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 517 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-204ENST00000465167 PRKAB2O43741 272 aa6.86□□□□□ -1.31
SSBP1-204ENST00000465167 COL6A1P12109 1028 aa6.86□□□□□ -1.31
SSBP1-204ENST00000465167 CYBAP13498 195 aa6.86□□□□□ -1.31
SSBP1-204ENST00000465167 EEF2P13639 858 aaKnown RBP6.86□□□□□ -1.31
SSBP1-204ENST00000465167 SELPP16109 830 aa6.86□□□□□ -1.31
SSBP1-204ENST00000465167 GTF2F1P35269 517 aaKnown RBP eCLIP6.86□□□□□ -1.31
SSBP1-204ENST00000465167 STAT3P40763 770 aa6.86□□□□□ -1.31
SSBP1-204ENST00000465167 SNRPNP63162 240 aaKnown RBP6.86□□□□□ -1.31
SSBP1-204ENST00000465167 RPL6Q02878 288 aaKnown RBP6.86□□□□□ -1.31
SSBP1-204ENST00000465167 IKQ13123 557 aaPredicted RBP6.86□□□□□ -1.31
SSBP1-204ENST00000465167 NFKBIBQ15653 356 aa6.86□□□□□ -1.31
SSBP1-204ENST00000465167 LRIT3Q3SXY7 679 aa6.86□□□□□ -1.31
SSBP1-204ENST00000465167 GJC2Q5T442 439 aaPredicted RBP6.86□□□□□ -1.31
SSBP1-204ENST00000465167 GIMAP6Q6P9H5 292 aa6.86□□□□□ -1.31
SSBP1-204ENST00000465167 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.86□□□□□ -1.31
SSBP1-204ENST00000465167 FBXO11Q86XK2 927 aa6.86□□□□□ -1.31
SSBP1-204ENST00000465167 APPBP2Q92624 585 aa6.86□□□□□ -1.31
SSBP1-204ENST00000465167 DDX11Q96FC9 970 aa6.86□□□□□ -1.31
SSBP1-204ENST00000465167 SLF1Q9BQI6 1058 aa6.86□□□□□ -1.31
SSBP1-204ENST00000465167 USP26Q9BXU7 913 aa6.86□□□□□ -1.31
SSBP1-204ENST00000465167 SPC25Q9HBM1 224 aa6.86□□□□□ -1.31
SSBP1-204ENST00000465167 XPNPEP3Q9NQH7 507 aa6.86□□□□□ -1.31
SSBP1-204ENST00000465167 FLRT1Q9NZU1 646 aa6.86□□□□□ -1.31
SSBP1-204ENST00000465167 NRBP1Q9UHY1 535 aa6.86□□□□□ -1.31
SSBP1-204ENST00000465167 PPP1R9AQ9ULJ8 1098 aa6.86□□□□□ -1.31
SSBP1-204ENST00000465167 CYP2D7A0A087X1C5 515 aa6.85□□□□□ -1.31
SSBP1-204ENST00000465167 VWA5AO00534 786 aa6.85□□□□□ -1.31
SSBP1-204ENST00000465167 DLL1O00548 723 aa6.85□□□□□ -1.31
SSBP1-204ENST00000465167 ZBED4O75132 1171 aa6.85□□□□□ -1.31
SSBP1-204ENST00000465167 BPNT1O95861 308 aa6.85□□□□□ -1.31
SSBP1-204ENST00000465167 DLGAP3O95886 979 aa6.85□□□□□ -1.31
SSBP1-204ENST00000465167 AKR1A1P14550 325 aa6.85□□□□□ -1.31
SSBP1-204ENST00000465167 LIG1P18858 919 aa6.85□□□□□ -1.31
SSBP1-204ENST00000465167 PDE4BQ07343 736 aa6.85□□□□□ -1.31
SSBP1-204ENST00000465167 RBL2Q08999 1139 aa6.85□□□□□ -1.31
SSBP1-204ENST00000465167 HSP90AA2PQ14568 343 aaPredicted RBP6.85□□□□□ -1.31
SSBP1-204ENST00000465167 TMEM132BQ14DG7 1078 aa6.85□□□□□ -1.31
SSBP1-204ENST00000465167 FAM83BQ5T0W9 1011 aa6.85□□□□□ -1.31
SSBP1-204ENST00000465167 ANO1Q5XXA6 986 aa6.85□□□□□ -1.31
SSBP1-204ENST00000465167 CTR9Q6PD62 1173 aa6.85□□□□□ -1.31
SSBP1-204ENST00000465167 REC114Q7Z4M0 266 aa6.85□□□□□ -1.31
SSBP1-204ENST00000465167 RIOX2Q8IUF8 465 aa6.85□□□□□ -1.31
SSBP1-204ENST00000465167 CLEC10AQ8IUN9 316 aa6.85□□□□□ -1.31
SSBP1-204ENST00000465167 FMR1NBQ8N0W7 255 aaPredicted RBP6.85□□□□□ -1.31
SSBP1-204ENST00000465167 STK11IPQ8N1F8 1099 aa6.85□□□□□ -1.31
SSBP1-204ENST00000465167 KBTBD3Q8NAB2 608 aa6.85□□□□□ -1.31
SSBP1-204ENST00000465167 NUP133Q8WUM0 1156 aa6.85□□□□□ -1.31
SSBP1-204ENST00000465167 WDR89Q96FK6 387 aaPredicted RBP6.85□□□□□ -1.31
SSBP1-204ENST00000465167 MAML3Q96JK9 1138 aa6.85□□□□□ -1.31
SSBP1-204ENST00000465167 PLVAPQ9BX97 442 aa6.85□□□□□ -1.31
SSBP1-204ENST00000465167 TEX13BQ9BXU2 312 aa6.85□□□□□ -1.31
SSBP1-204ENST00000465167 STRIP2Q9ULQ0 834 aa6.85□□□□□ -1.31
SSBP1-204ENST00000465167 PCDHA4Q9UN74 947 aa6.85□□□□□ -1.31
SSBP1-204ENST00000465167 DIS3Q9Y2L1 958 aaKnown RBP6.85□□□□□ -1.31
SSBP1-204ENST00000465167 RLFQ13129 1914 aa6.85□□□□□ -1.31
SSBP1-204ENST00000465167 TRIOBPQ9H2D6 2365 aa6.84□□□□□ -1.31
SSBP1-204ENST00000465167 TTC41PQ6P2S7 1318 aa6.84□□□□□ -1.31
SSBP1-204ENST00000465167 GFRA2O00451 464 aa6.84□□□□□ -1.31
SSBP1-204ENST00000465167 RNF113AO15541 343 aaKnown RBP6.84□□□□□ -1.31
SSBP1-204ENST00000465167 GPAA1O43292 621 aa6.84□□□□□ -1.31
SSBP1-204ENST00000465167 WIPF1O43516 503 aa6.84□□□□□ -1.31
SSBP1-204ENST00000465167 SMARCA5O60264 1052 aaPredicted RBP6.84□□□□□ -1.31
SSBP1-204ENST00000465167 COBLO75128 1261 aa6.84□□□□□ -1.31
SSBP1-204ENST00000465167 TSPY3P0CV98 308 aa6.84□□□□□ -1.31
SSBP1-204ENST00000465167 TSPY8P0CW00 308 aa6.84□□□□□ -1.31
SSBP1-204ENST00000465167 MCM4P33991 863 aa6.84□□□□□ -1.31
SSBP1-204ENST00000465167 RRP1P56182 461 aaKnown RBP6.84□□□□□ -1.31
SSBP1-204ENST00000465167 RAC1P63000 192 aa6.84□□□□□ -1.31
SSBP1-204ENST00000465167 LRRC41Q15345 812 aa6.84□□□□□ -1.31
SSBP1-204ENST00000465167 TRIM60Q495X7 471 aa6.84□□□□□ -1.31
SSBP1-204ENST00000465167 SBK1Q52WX2 424 aa6.84□□□□□ -1.31
SSBP1-204ENST00000465167 HP1BP3Q5SSJ5 553 aaPredicted RBP6.84□□□□□ -1.31
SSBP1-204ENST00000465167 SNRNP48Q6IEG0 339 aaKnown RBP6.84□□□□□ -1.31
SSBP1-204ENST00000465167 CCDC174Q6PII3 467 aa6.84□□□□□ -1.31
SSBP1-204ENST00000465167 SLC39A5Q6ZMH5 540 aa6.84□□□□□ -1.31
SSBP1-204ENST00000465167 SIRT2Q8IXJ6 389 aa6.84□□□□□ -1.31
SSBP1-204ENST00000465167 CPXCR1Q8N123 301 aa6.84□□□□□ -1.31
SSBP1-204ENST00000465167 REXO1Q8N1G1 1221 aaKnown RBP6.84□□□□□ -1.31
SSBP1-204ENST00000465167 MSL3Q8N5Y2 521 aaKnown RBP6.84□□□□□ -1.31
SSBP1-204ENST00000465167 PRPF38AQ8NAV1 312 aaKnown RBP6.84□□□□□ -1.31
SSBP1-204ENST00000465167 FSD1Q9BTV5 496 aa6.84□□□□□ -1.31
SSBP1-204ENST00000465167 PUS7LQ9H0K6 701 aaKnown RBP6.84□□□□□ -1.31
SSBP1-204ENST00000465167 NAPBQ9H115 298 aa6.84□□□□□ -1.31
SSBP1-204ENST00000465167 BRMS1Q9HCU9 246 aa6.84□□□□□ -1.31
SSBP1-204ENST00000465167 NYAP2Q9P242 653 aa6.84□□□□□ -1.31
SSBP1-204ENST00000465167 CLIP2Q9UDT6 1046 aa6.84□□□□□ -1.31
SSBP1-204ENST00000465167 FBXO40Q9UH90 709 aa6.84□□□□□ -1.31
SSBP1-204ENST00000465167 FEM1BQ9UK73 627 aa6.84□□□□□ -1.31
SSBP1-204ENST00000465167 ZHX1Q9UKY1 873 aaPredicted RBP6.84□□□□□ -1.31
SSBP1-204ENST00000465167 FAM184BQ9ULE4 1060 aa6.84□□□□□ -1.31
SSBP1-204ENST00000465167 STXBP5LQ9Y2K9 1186 aa6.84□□□□□ -1.31
SSBP1-204ENST00000465167 LTBP2Q14767 1821 aa6.84□□□□□ -1.31
SSBP1-204ENST00000465167 CENPFP49454 3210 aa6.84□□□□□ -1.32
SSBP1-204ENST00000465167 ROBO3Q96MS0 1386 aa6.83□□□□□ -1.32
SSBP1-204ENST00000465167 MROH7Q68CQ1 1323 aa6.83□□□□□ -1.32
SSBP1-204ENST00000465167 SYNGAP1Q96PV0 1343 aa6.83□□□□□ -1.32
SSBP1-204ENST00000465167 DCDC2CA8MYV0 355 aa6.83□□□□□ -1.32
SSBP1-204ENST00000465167 F5H6K3 240 aa6.83□□□□□ -1.32
SSBP1-204ENST00000465167 GNB5O14775 395 aa6.83□□□□□ -1.32
SSBP1-204ENST00000465167 STK10O94804 968 aaKnown RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms