RNA–Protein interactions for RNA: ENST00000464520.1

ABCA2-211, Transcript of ATP binding cassette subfamily A member 2, human

TSL 2

Gene ABCA2, Length 886 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA2-211	ENST00000464520	NFX1	Q12986	1120 aa	Known RBP	27.62	■■■□□ 2.01
ABCA2-211	ENST00000464520	ORC2	Q13416	577 aa	Predicted RBP	27.62	■■■□□ 2.01
ABCA2-211	ENST00000464520	RTN4RL1	Q86UN2	441 aa	Predicted RBP	27.62	■■■□□ 2.01
ABCA2-211	ENST00000464520	CEP89	Q96ST8	783 aa		27.62	■■■□□ 2.01
ABCA2-211	ENST00000464520	ERVK-5	Q9HDB9	667 aa		27.62	■■■□□ 2.01
ABCA2-211	ENST00000464520	NOC2L	Q9Y3T9	749 aa	Known RBP	27.62	■■■□□ 2.01
ABCA2-211	ENST00000464520	PTPRS	Q13332	1948 aa		27.62	■■■□□ 2.01
ABCA2-211	ENST00000464520	TRANK1	O15050	2925 aa		27.62	■■■□□ 2.01
ABCA2-211	ENST00000464520	IGKV6-21	A0A0C4DH24	114 aa		27.61	■■■□□ 2.01
ABCA2-211	ENST00000464520	NEMF	O60524	1076 aa		27.61	■■■□□ 2.01
ABCA2-211	ENST00000464520	STAG3L1	P0CL83	205 aa		27.61	■■■□□ 2.01
ABCA2-211	ENST00000464520	NLRP11	P59045	1033 aa	Known RBP	27.61	■■■□□ 2.01
ABCA2-211	ENST00000464520	GUCY1B3	Q02153	619 aa		27.61	■■■□□ 2.01
ABCA2-211	ENST00000464520	SPIRE1	Q08AE8	756 aa		27.61	■■■□□ 2.01
ABCA2-211	ENST00000464520	MTERF2	Q49AM1	385 aa		27.61	■■■□□ 2.01
ABCA2-211	ENST00000464520	ANO5	Q75V66	913 aa		27.61	■■■□□ 2.01
ABCA2-211	ENST00000464520	C4orf19	Q8IY42	314 aa		27.61	■■■□□ 2.01
ABCA2-211	ENST00000464520	LRRC71	Q8N4P6	559 aa		27.61	■■■□□ 2.01
ABCA2-211	ENST00000464520	TBC1D32	Q96NH3	1257 aa		27.61	■■■□□ 2.01
ABCA2-211	ENST00000464520	ADAMTS10	Q9H324	1103 aa		27.61	■■■□□ 2.01
ABCA2-211	ENST00000464520	ZSWIM4	Q9H7M6	989 aa		27.61	■■■□□ 2.01
ABCA2-211	ENST00000464520	ST3GAL5	Q9UNP4	418 aa		27.61	■■■□□ 2.01
ABCA2-211	ENST00000464520	EPOP	A6NHQ4	379 aa		27.6	■■■□□ 2.01
ABCA2-211	ENST00000464520	RBAK-RBAKDN	I3L0D1	243 aa		27.6	■■■□□ 2.01
ABCA2-211	ENST00000464520	RFXAP	O00287	272 aa		27.6	■■■□□ 2.01
ABCA2-211	ENST00000464520	MAF	O75444	373 aa	Predicted RBP	27.6	■■■□□ 2.01
ABCA2-211	ENST00000464520	OTUD6A	Q7L8S5	288 aa		27.6	■■■□□ 2.01
ABCA2-211	ENST00000464520	NPAS4	Q8IUM7	802 aa		27.6	■■■□□ 2.01
ABCA2-211	ENST00000464520	TMEM40	Q8WWA1	233 aa		27.6	■■■□□ 2.01
ABCA2-211	ENST00000464520	MTMR9	Q96QG7	549 aa		27.6	■■■□□ 2.01
ABCA2-211	ENST00000464520	OSMR	Q99650	979 aa		27.6	■■■□□ 2.01
ABCA2-211	ENST00000464520	TMX1	Q9H3N1	280 aa		27.6	■■■□□ 2.01
ABCA2-211	ENST00000464520	MTCH2	Q9Y6C9	303 aa		27.6	■■■□□ 2.01
ABCA2-211	ENST00000464520	EVPL	Q92817	2033 aa		27.6	■■■□□ 2.01
ABCA2-211	ENST00000464520	EIF4B	P23588	611 aa	Known RBP	27.59	■■■□□ 2.01
ABCA2-211	ENST00000464520	GRB10	Q13322	594 aa		27.59	■■■□□ 2.01
ABCA2-211	ENST00000464520	TMEM266	Q2M3C6	531 aa		27.59	■■■□□ 2.01
ABCA2-211	ENST00000464520	NCAPH2	Q6IBW4	605 aa		27.59	■■■□□ 2.01
ABCA2-211	ENST00000464520	CRIPAK	Q8N1N5	446 aa		27.59	■■■□□ 2.01
ABCA2-211	ENST00000464520	LINC01599	Q8WXQ3	324 aa		27.59	■■■□□ 2.01
ABCA2-211	ENST00000464520	TTC12	Q9H892	705 aa	Predicted RBP	27.59	■■■□□ 2.01
ABCA2-211	ENST00000464520	CYP26B1	Q9NR63	512 aa		27.59	■■■□□ 2.01
ABCA2-211	ENST00000464520	C1orf112	Q9NSG2	853 aa		27.59	■■■□□ 2.01
ABCA2-211	ENST00000464520	TTC3	P53804	2025 aa		27.58	■■■□□ 2.01
ABCA2-211	ENST00000464520	DGKI	O75912	1065 aa		27.58	■■■□□ 2.01
ABCA2-211	ENST00000464520	TRAPPC10	P48553	1259 aa		27.58	■■■□□ 2.01
ABCA2-211	ENST00000464520	GNL2	Q13823	731 aa	Known RBP	27.58	■■■□□ 2.01
ABCA2-211	ENST00000464520	FIBCD1	Q8N539	461 aa		27.58	■■■□□ 2.01
ABCA2-211	ENST00000464520	NEK9	Q8TD19	979 aa		27.58	■■■□□ 2.01
ABCA2-211	ENST00000464520	ZNF689	Q96CS4	500 aa	Predicted RBP	27.58	■■■□□ 2.01
ABCA2-211	ENST00000464520	RGS18	Q9NS28	235 aa		27.58	■■■□□ 2.01
ABCA2-211	ENST00000464520	SI	P14410	1827 aa		27.57	■■■□□ 2
ABCA2-211	ENST00000464520	WDR81	Q562E7	1941 aa		27.57	■■■□□ 2
ABCA2-211	ENST00000464520	LPXN	O60711	386 aa		27.57	■■■□□ 2
ABCA2-211	ENST00000464520	GPC3	P51654	580 aa		27.57	■■■□□ 2
ABCA2-211	ENST00000464520	SPRED2	Q7Z698	418 aa		27.57	■■■□□ 2
ABCA2-211	ENST00000464520	FAM228A	Q86W67	206 aa		27.57	■■■□□ 2
ABCA2-211	ENST00000464520	NOSTRIN	Q8IVI9	506 aa		27.57	■■■□□ 2
ABCA2-211	ENST00000464520	FBXO22	Q8NEZ5	403 aa		27.57	■■■□□ 2
ABCA2-211	ENST00000464520	PPM1E	Q8WY54	764 aa		27.57	■■■□□ 2
ABCA2-211	ENST00000464520	TMX3	Q96JJ7	454 aa		27.57	■■■□□ 2
ABCA2-211	ENST00000464520	HSD17B14	Q9BPX1	270 aa		27.57	■■■□□ 2
ABCA2-211	ENST00000464520	LXN	Q9BS40	222 aa		27.57	■■■□□ 2
ABCA2-211	ENST00000464520	RC3H2	Q9HBD1	1191 aa	Known RBP	27.57	■■■□□ 2
ABCA2-211	ENST00000464520	RWDD3	Q9Y3V2	267 aa		27.57	■■■□□ 2
ABCA2-211	ENST00000464520	COL4A6	Q14031	1691 aa		27.56	■■■□□ 2
ABCA2-211	ENST00000464520	DENND3	A2RUS2	1198 aa		27.56	■■■□□ 2
ABCA2-211	ENST00000464520	SLITRK3	O94933	977 aa		27.56	■■■□□ 2
ABCA2-211	ENST00000464520	RFC5	P40937	340 aa		27.56	■■■□□ 2
ABCA2-211	ENST00000464520	TXK	P42681	527 aa		27.56	■■■□□ 2
ABCA2-211	ENST00000464520	SARS	P49591	514 aa	Known RBP	27.56	■■■□□ 2
ABCA2-211	ENST00000464520	SLC24A5	Q71RS6	500 aa		27.56	■■■□□ 2
ABCA2-211	ENST00000464520	SLC7A3	Q8WY07	619 aa		27.56	■■■□□ 2
ABCA2-211	ENST00000464520	DYDC2	Q96IM9	177 aa		27.56	■■■□□ 2
ABCA2-211	ENST00000464520	CEP170P1	Q96L14	293 aa		27.56	■■■□□ 2
ABCA2-211	ENST00000464520	PPP1R16B	Q96T49	567 aa		27.56	■■■□□ 2
ABCA2-211	ENST00000464520	ADAM2	Q99965	735 aa		27.56	■■■□□ 2
ABCA2-211	ENST00000464520	C17orf80	Q9BSJ5	609 aa		27.56	■■■□□ 2
ABCA2-211	ENST00000464520	RGL1	Q9NZL6	768 aa		27.56	■■■□□ 2
ABCA2-211	ENST00000464520	MTUS1	Q9ULD2	1270 aa		27.56	■■■□□ 2
ABCA2-211	ENST00000464520	PRUNE2	Q8WUY3	3088 aa		27.55	■■■□□ 2
ABCA2-211	ENST00000464520	TMEM150B	A6NC51	233 aa		27.55	■■■□□ 2
ABCA2-211	ENST00000464520	LYPLA2	O95372	231 aa		27.55	■■■□□ 2
ABCA2-211	ENST00000464520	DARS	P14868	501 aa	Known RBP	27.55	■■■□□ 2
ABCA2-211	ENST00000464520	ATP2B1	P20020	1258 aa		27.55	■■■□□ 2
ABCA2-211	ENST00000464520	U2AF2	P26368	475 aa	Known RBP eCLIP	27.55	■■■□□ 2
ABCA2-211	ENST00000464520	YWHAB	P31946	246 aa	Known RBP	27.55	■■■□□ 2
ABCA2-211	ENST00000464520	MCM7	P33993	719 aa		27.55	■■■□□ 2
ABCA2-211	ENST00000464520	CCDC85B	Q15834	202 aa	Predicted RBP	27.55	■■■□□ 2
ABCA2-211	ENST00000464520	EPC2	Q52LR7	807 aa		27.55	■■■□□ 2
ABCA2-211	ENST00000464520	ZNF410	Q86VK4	478 aa		27.55	■■■□□ 2
ABCA2-211	ENST00000464520	TMEM192	Q8IY95	271 aa		27.55	■■■□□ 2
ABCA2-211	ENST00000464520	EIF2AK1	Q9BQI3	630 aa	Known RBP	27.55	■■■□□ 2
ABCA2-211	ENST00000464520	GCOM2	Q9BZD3	368 aa	Predicted RBP	27.55	■■■□□ 2
ABCA2-211	ENST00000464520	SUCLA2	Q9P2R7	463 aa	Predicted RBP	27.55	■■■□□ 2
ABCA2-211	ENST00000464520	LRFN2	Q9ULH4	789 aa		27.55	■■■□□ 2
ABCA2-211	ENST00000464520	PCDHB7	Q9Y5E2	793 aa		27.55	■■■□□ 2
ABCA2-211	ENST00000464520	ADGRA3	Q8IWK6	1321 aa		27.55	■■■□□ 2
ABCA2-211	ENST00000464520	PRRC2B	Q5JSZ5	2229 aa	Known RBP	27.55	■■■□□ 2
ABCA2-211	ENST00000464520	WNT7A	O00755	349 aa		27.54	■■■□□ 2

Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms