RNA–Protein interactions for RNA: ENST00000461578.1

PABPC4-208, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5

Gene PABPC4, Length 193 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-208ENST00000461578 NFASCO94856 1347 aa15.68■□□□□ 0.1
PABPC4-208ENST00000461578 HBP1O60381 514 aa15.68■□□□□ 0.1
PABPC4-208ENST00000461578 VTNP04004 478 aa15.68■□□□□ 0.1
PABPC4-208ENST00000461578 GSPT1P15170 499 aaKnown RBP15.68■□□□□ 0.1
PABPC4-208ENST00000461578 KRT17Q04695 432 aa15.68■□□□□ 0.1
PABPC4-208ENST00000461578 ASTLQ6HA08 431 aaPredicted RBP15.68■□□□□ 0.1
PABPC4-208ENST00000461578 CASC1Q6TDU7 716 aa15.68■□□□□ 0.1
PABPC4-208ENST00000461578 ZNF558Q96NG5 402 aa15.68■□□□□ 0.1
PABPC4-208ENST00000461578 CASD1Q96PB1 797 aa15.68■□□□□ 0.1
PABPC4-208ENST00000461578 TMEM117Q9H0C3 514 aa15.68■□□□□ 0.1
PABPC4-208ENST00000461578 ADAM7Q9H2U9 754 aa15.68■□□□□ 0.1
PABPC4-208ENST00000461578 AGO4Q9HCK5 861 aaKnown RBP15.68■□□□□ 0.1
PABPC4-208ENST00000461578 CCDC69A6NI79 296 aa15.67■□□□□ 0.1
PABPC4-208ENST00000461578 PRC1O43663 620 aa15.67■□□□□ 0.1
PABPC4-208ENST00000461578 ATG7O95352 703 aa15.67■□□□□ 0.1
PABPC4-208ENST00000461578 CCNE2O96020 404 aa15.67■□□□□ 0.1
PABPC4-208ENST00000461578 FAM189BP81408 668 aa15.67■□□□□ 0.1
PABPC4-208ENST00000461578 RARS2Q5T160 578 aaKnown RBP15.67■□□□□ 0.1
PABPC4-208ENST00000461578 FAM160B1Q5W0V3 765 aa15.67■□□□□ 0.1
PABPC4-208ENST00000461578 CCDC60Q8IWA6 550 aaPredicted RBP15.67■□□□□ 0.1
PABPC4-208ENST00000461578 ABI1Q8IZP0 508 aa15.67■□□□□ 0.1
PABPC4-208ENST00000461578 C12orf76Q8N812 135 aaPredicted RBP15.67■□□□□ 0.1
PABPC4-208ENST00000461578 RNF169Q8NCN4 708 aa15.67■□□□□ 0.1
PABPC4-208ENST00000461578 RUFY2Q8WXA3 655 aa15.67■□□□□ 0.1
PABPC4-208ENST00000461578 NKD2Q969F2 451 aaPredicted RBP15.67■□□□□ 0.1
PABPC4-208ENST00000461578 NECTIN4Q96NY8 510 aa15.67■□□□□ 0.1
PABPC4-208ENST00000461578 ELAC1Q9H777 363 aaKnown RBP15.67■□□□□ 0.1
PABPC4-208ENST00000461578 RNF19AQ9NV58 838 aa15.67■□□□□ 0.1
PABPC4-208ENST00000461578 SPG21Q9NZD8 308 aa15.67■□□□□ 0.1
PABPC4-208ENST00000461578 LIMD1Q9UGP4 676 aa15.67■□□□□ 0.1
PABPC4-208ENST00000461578 C2orf71A6NGG8 1288 aa15.66■□□□□ 0.1
PABPC4-208ENST00000461578 CLASP2O75122 1294 aaKnown RBP15.66■□□□□ 0.1
PABPC4-208ENST00000461578 PPM1AP35813 382 aa15.66■□□□□ 0.1
PABPC4-208ENST00000461578 SLC26A2P50443 739 aa15.66■□□□□ 0.1
PABPC4-208ENST00000461578 CRYBB1P53674 252 aaPredicted RBP15.66■□□□□ 0.1
PABPC4-208ENST00000461578 ITIH3Q06033 890 aa15.66■□□□□ 0.1
PABPC4-208ENST00000461578 DSC3Q14574 896 aa15.66■□□□□ 0.1
PABPC4-208ENST00000461578 SMC1AQ14683 1233 aaKnown RBP15.66■□□□□ 0.1
PABPC4-208ENST00000461578 KANK3Q6NY19 840 aa15.66■□□□□ 0.1
PABPC4-208ENST00000461578 PDXDC2PQ6P474 469 aa15.66■□□□□ 0.1
PABPC4-208ENST00000461578 CKAP2LQ8IYA6 745 aa15.66■□□□□ 0.1
PABPC4-208ENST00000461578 ADSSL1Q8N142 457 aa15.66■□□□□ 0.1
PABPC4-208ENST00000461578 LRRC43Q8N309 656 aa15.66■□□□□ 0.1
PABPC4-208ENST00000461578 METTL13Q8N6R0 699 aa15.66■□□□□ 0.1
PABPC4-208ENST00000461578 TDRD5Q8NAT2 981 aaKnown RBP15.66■□□□□ 0.1
PABPC4-208ENST00000461578 FLCNQ8NFG4 579 aa15.66■□□□□ 0.1
PABPC4-208ENST00000461578 ZNF302Q9NR11 478 aa15.66■□□□□ 0.1
PABPC4-208ENST00000461578 RIF1Q5UIP0 2472 aaKnown RBP15.66■□□□□ 0.1
PABPC4-208ENST00000461578 FAM186AA6NE01 2351 aa15.65■□□□□ 0.1
PABPC4-208ENST00000461578 COL1A2P08123 1366 aa15.65■□□□□ 0.1
PABPC4-208ENST00000461578 IGKV6D-21A0A0A0MT36 114 aa15.65■□□□□ 0.1
PABPC4-208ENST00000461578 ZBTB42B2RXF5 422 aa15.65■□□□□ 0.1
PABPC4-208ENST00000461578 NT5C1B-RDH14C9J2C7 533 aa15.65■□□□□ 0.1
PABPC4-208ENST00000461578 SH2B2O14492 632 aaPredicted RBP15.65■□□□□ 0.1
PABPC4-208ENST00000461578 HOXA2O43364 376 aa15.65■□□□□ 0.1
PABPC4-208ENST00000461578 GPR32O75388 356 aa15.65■□□□□ 0.1
PABPC4-208ENST00000461578 C22orf31O95567 290 aa15.65■□□□□ 0.1
PABPC4-208ENST00000461578 CHMLP26374 656 aa15.65■□□□□ 0.1
PABPC4-208ENST00000461578 MTHFRP42898 656 aa15.65■□□□□ 0.1
PABPC4-208ENST00000461578 ID4P47928 161 aa15.65■□□□□ 0.1
PABPC4-208ENST00000461578 METAP2P50579 478 aaKnown RBP eCLIP15.65■□□□□ 0.12e-12■■■□□ 16.5
PABPC4-208ENST00000461578 CEP55Q53EZ4 464 aa15.65■□□□□ 0.1
PABPC4-208ENST00000461578 ZNF484Q5JVG2 852 aa15.65■□□□□ 0.1
PABPC4-208ENST00000461578 TTC22Q5TAA0 569 aa15.65■□□□□ 0.1
PABPC4-208ENST00000461578 MCTP2Q6DN12 878 aa15.65■□□□□ 0.1
PABPC4-208ENST00000461578 SWSAP1Q6NVH7 229 aa15.65■□□□□ 0.1
PABPC4-208ENST00000461578 ABHD15Q6UXT9 468 aa15.65■□□□□ 0.1
PABPC4-208ENST00000461578 MRPL43Q8N983 215 aaKnown RBP15.65■□□□□ 0.1
PABPC4-208ENST00000461578 ZNF668Q96K58 619 aaPredicted RBP15.65■□□□□ 0.1
PABPC4-208ENST00000461578 ANO3Q9BYT9 981 aa15.65■□□□□ 0.1
PABPC4-208ENST00000461578 DBR1Q9UK59 544 aaKnown RBP15.65■□□□□ 0.1
PABPC4-208ENST00000461578 VPS13AQ96RL7 3174 aa15.64■□□□□ 0.09
PABPC4-208ENST00000461578 ATP4AP20648 1035 aa15.64■□□□□ 0.09
PABPC4-208ENST00000461578 ZNF76P36508 570 aa15.64■□□□□ 0.09
PABPC4-208ENST00000461578 CLCN3P51790 818 aa15.64■□□□□ 0.09
PABPC4-208ENST00000461578 NAPAP54920 295 aa15.64■□□□□ 0.09
PABPC4-208ENST00000461578 COL9A3Q14050 684 aaPredicted RBP15.64■□□□□ 0.09
PABPC4-208ENST00000461578 WWC2Q6AWC2 1192 aa15.64■□□□□ 0.09
PABPC4-208ENST00000461578 ECHDC2Q86YB7 292 aa15.64■□□□□ 0.09
PABPC4-208ENST00000461578 SLC39A11Q8N1S5 342 aa15.64■□□□□ 0.09
PABPC4-208ENST00000461578 AUTS2Q8WXX7 1259 aa15.64■□□□□ 0.09
PABPC4-208ENST00000461578 RBM8AQ9Y5S9 174 aaKnown RBP15.64■□□□□ 0.09
PABPC4-208ENST00000461578 CXCL14O95715 111 aa15.63■□□□□ 0.09
PABPC4-208ENST00000461578 CALM1P0DP23 149 aa15.63■□□□□ 0.09
PABPC4-208ENST00000461578 CALM2P0DP24 149 aa15.63■□□□□ 0.09
PABPC4-208ENST00000461578 CALM3P0DP25 149 aa15.63■□□□□ 0.09
PABPC4-208ENST00000461578 ZSCAN20P17040 1043 aaPredicted RBP15.63■□□□□ 0.09
PABPC4-208ENST00000461578 CLLU1OSQ5K130 101 aa15.63■□□□□ 0.09
PABPC4-208ENST00000461578 CWF19L1Q69YN2 538 aaKnown RBP15.63■□□□□ 0.09
PABPC4-208ENST00000461578 TYW1BQ6NUM6 668 aa15.63■□□□□ 0.09
PABPC4-208ENST00000461578 MIS18BP1Q6P0N0 1132 aa15.63■□□□□ 0.09
PABPC4-208ENST00000461578 FAM43BQ6ZT52 329 aaPredicted RBP15.63■□□□□ 0.09
PABPC4-208ENST00000461578 TMTC3Q6ZXV5 915 aa15.63■□□□□ 0.09
PABPC4-208ENST00000461578 ERMP1Q7Z2K6 904 aa15.63■□□□□ 0.09
PABPC4-208ENST00000461578 MICU3Q86XE3 530 aa15.63■□□□□ 0.09
PABPC4-208ENST00000461578 TMEM87AQ8NBN3 555 aa15.63■□□□□ 0.09
PABPC4-208ENST00000461578 FEZF2Q8TBJ5 459 aa15.63■□□□□ 0.09
PABPC4-208ENST00000461578 HELQQ8TDG4 1101 aa15.63■□□□□ 0.09
PABPC4-208ENST00000461578 LRRC2Q9BYS8 371 aa15.63■□□□□ 0.09
PABPC4-208ENST00000461578 AKT3Q9Y243 479 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms