RNA–Protein interactions for RNA: ENST00000460333.5

VPS13D-202, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 4,910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-202ENST00000460333 CHCHD3Q9NX63 227 aaKnown RBP6.69□□□□□ -1.34
VPS13D-202ENST00000460333 FEM1BQ9UK73 627 aa6.69□□□□□ -1.34
VPS13D-202ENST00000460333 HPCAL4Q9UM19 191 aa6.69□□□□□ -1.34
VPS13D-202ENST00000460333 PLAAQ9Y263 795 aa6.69□□□□□ -1.34
VPS13D-202ENST00000460333 TACC3Q9Y6A5 838 aa6.69□□□□□ -1.34
VPS13D-202ENST00000460333 MYH13Q9UKX3 1938 aa6.69□□□□□ -1.34
VPS13D-202ENST00000460333 PASKQ96RG2 1323 aa6.69□□□□□ -1.34
VPS13D-202ENST00000460333 PLIN4Q96Q06 1357 aa6.69□□□□□ -1.34
VPS13D-202ENST00000460333 MAPK13O15264 365 aa6.69□□□□□ -1.34
VPS13D-202ENST00000460333 HNRNPCL1O60812 293 aaKnown RBP6.69□□□□□ -1.34
VPS13D-202ENST00000460333 RPS6KA5O75582 802 aa6.69□□□□□ -1.34
VPS13D-202ENST00000460333 ZFXP17010 805 aaPredicted RBP6.69□□□□□ -1.34
VPS13D-202ENST00000460333 USP11P51784 963 aa6.69□□□□□ -1.34
VPS13D-202ENST00000460333 SESN3P58005 492 aa6.69□□□□□ -1.34
VPS13D-202ENST00000460333 VSNL1P62760 191 aa6.69□□□□□ -1.34
VPS13D-202ENST00000460333 NFIAQ12857 509 aa6.69□□□□□ -1.34
VPS13D-202ENST00000460333 ZNF658Q5TYW1 1059 aaPredicted RBP6.69□□□□□ -1.34
VPS13D-202ENST00000460333 KIFC2Q96AC6 838 aa6.69□□□□□ -1.34
VPS13D-202ENST00000460333 DHTKD1Q96HY7 919 aaPredicted RBP6.69□□□□□ -1.34
VPS13D-202ENST00000460333 THAP9Q9H5L6 903 aa6.69□□□□□ -1.34
VPS13D-202ENST00000460333 DDX4Q9NQI0 724 aaKnown RBP6.69□□□□□ -1.34
VPS13D-202ENST00000460333 PAIP2BQ9ULR5 123 aaKnown RBP6.69□□□□□ -1.34
VPS13D-202ENST00000460333 USP17L10C9JJH3 530 aa6.69□□□□□ -1.34
VPS13D-202ENST00000460333 MDH1P40925 334 aaKnown RBP6.69□□□□□ -1.34
VPS13D-202ENST00000460333 IRAK1P51617 712 aa6.69□□□□□ -1.34
VPS13D-202ENST00000460333 PDE1CQ14123 709 aaPredicted RBP6.69□□□□□ -1.34
VPS13D-202ENST00000460333 GNPTABQ3T906 1256 aa6.69□□□□□ -1.34
VPS13D-202ENST00000460333 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.69□□□□□ -1.34
VPS13D-202ENST00000460333 KRT26Q7Z3Y9 468 aa6.69□□□□□ -1.34
VPS13D-202ENST00000460333 FAM83AQ86UY5 434 aa6.69□□□□□ -1.34
VPS13D-202ENST00000460333 MSL3Q8N5Y2 521 aaKnown RBP6.69□□□□□ -1.34
VPS13D-202ENST00000460333 MSANTD4Q8NCY6 345 aa6.69□□□□□ -1.34
VPS13D-202ENST00000460333 GMCL1P1Q8NEA9 526 aa6.69□□□□□ -1.34
VPS13D-202ENST00000460333 ABTB1Q969K4 478 aaPredicted RBP6.69□□□□□ -1.34
VPS13D-202ENST00000460333 FAM212AQ96EL1 285 aa6.69□□□□□ -1.34
VPS13D-202ENST00000460333 PLIN2Q99541 437 aa6.69□□□□□ -1.34
VPS13D-202ENST00000460333 ATP6V0A4Q9HBG4 840 aa6.69□□□□□ -1.34
VPS13D-202ENST00000460333 DIS3Q9Y2L1 958 aaKnown RBP6.69□□□□□ -1.34
VPS13D-202ENST00000460333 ZMYND10O75800 440 aa6.69□□□□□ -1.34
VPS13D-202ENST00000460333 CFBP00751 764 aa6.69□□□□□ -1.34
VPS13D-202ENST00000460333 VIL1P09327 827 aaKnown RBP6.69□□□□□ -1.34
VPS13D-202ENST00000460333 PHBP35232 272 aa6.69□□□□□ -1.34
VPS13D-202ENST00000460333 TPD52P55327 224 aaPredicted RBP6.69□□□□□ -1.34
VPS13D-202ENST00000460333 CCNA1P78396 465 aa6.69□□□□□ -1.34
VPS13D-202ENST00000460333 GOLGA8FQ08AF8 430 aa6.69□□□□□ -1.34
VPS13D-202ENST00000460333 GOLGA8DPQ0D2H9 430 aa6.69□□□□□ -1.34
VPS13D-202ENST00000460333 MKRN3Q13064 507 aaKnown RBP6.69□□□□□ -1.34
VPS13D-202ENST00000460333 PDIA5Q14554 519 aa6.69□□□□□ -1.34
VPS13D-202ENST00000460333 QRICH1Q2TAL8 776 aa6.69□□□□□ -1.34
VPS13D-202ENST00000460333 TRIM42Q8IWZ5 723 aa6.69□□□□□ -1.34
VPS13D-202ENST00000460333 KIFAP3Q92845 792 aa6.69□□□□□ -1.34
VPS13D-202ENST00000460333 CHMP6Q96FZ7 201 aa6.69□□□□□ -1.34
VPS13D-202ENST00000460333 SGSM3Q96HU1 749 aa6.69□□□□□ -1.34
VPS13D-202ENST00000460333 SLC40A1Q9NP59 571 aa6.69□□□□□ -1.34
VPS13D-202ENST00000460333 DNM3Q9UQ16 869 aa6.69□□□□□ -1.34
VPS13D-202ENST00000460333 DOCK2Q92608 1830 aa6.69□□□□□ -1.34
VPS13D-202ENST00000460333 MAST2Q6P0Q8 1798 aa6.69□□□□□ -1.34
VPS13D-202ENST00000460333 UBE2Q2LH0YL09 131 aa6.68□□□□□ -1.34
VPS13D-202ENST00000460333 FDX1P10109 184 aa6.68□□□□□ -1.34
VPS13D-202ENST00000460333 GABPAQ06546 454 aa6.68□□□□□ -1.34
VPS13D-202ENST00000460333 TMED1Q13445 227 aa6.68□□□□□ -1.34
VPS13D-202ENST00000460333 ZYXQ15942 572 aaKnown RBP6.68□□□□□ -1.34
VPS13D-202ENST00000460333 METTL16Q86W50 562 aaKnown RBP6.68□□□□□ -1.34
VPS13D-202ENST00000460333 APOBEC3FQ8IUX4 373 aaKnown RBP6.68□□□□□ -1.34
VPS13D-202ENST00000460333 PIP4K2CQ8TBX8 421 aa6.68□□□□□ -1.34
VPS13D-202ENST00000460333 LZICQ8WZA0 190 aa6.68□□□□□ -1.34
VPS13D-202ENST00000460333 MKL1Q969V6 931 aa6.68□□□□□ -1.34
VPS13D-202ENST00000460333 GRAMD1AQ96CP6 724 aa6.68□□□□□ -1.34
VPS13D-202ENST00000460333 GMCL1Q96IK5 515 aa6.68□□□□□ -1.34
VPS13D-202ENST00000460333 PRMT6Q96LA8 375 aaPredicted RBP6.68□□□□□ -1.34
VPS13D-202ENST00000460333 ANO3Q9BYT9 981 aa6.68□□□□□ -1.34
VPS13D-202ENST00000460333 BLZF1Q9H2G9 400 aa6.68□□□□□ -1.34
VPS13D-202ENST00000460333 JMJD4Q9H9V9 463 aa6.68□□□□□ -1.34
VPS13D-202ENST00000460333 CD2APQ9Y5K6 639 aa6.68□□□□□ -1.34
VPS13D-202ENST00000460333 BAG2O95816 211 aa6.68□□□□□ -1.34
VPS13D-202ENST00000460333 CPVLQ9H3G5 476 aa6.68□□□□□ -1.34
VPS13D-202ENST00000460333 TAF1LQ8IZX4 1826 aa6.68□□□□□ -1.34
VPS13D-202ENST00000460333 FAM205CA6NFA0 338 aa6.68□□□□□ -1.34
VPS13D-202ENST00000460333 SMIM22K7EJ46 135 aa6.68□□□□□ -1.34
VPS13D-202ENST00000460333 MMEP08473 750 aa6.68□□□□□ -1.34
VPS13D-202ENST00000460333 HOXD10P28358 340 aa6.68□□□□□ -1.34
VPS13D-202ENST00000460333 ESRRGP62508 458 aa6.68□□□□□ -1.34
VPS13D-202ENST00000460333 PSMD2Q13200 908 aa6.68□□□□□ -1.34
VPS13D-202ENST00000460333 ANKRD20A4Q4UJ75 823 aa6.68□□□□□ -1.34
VPS13D-202ENST00000460333 ANKRD20A8PQ5CZ79 823 aa6.68□□□□□ -1.34
VPS13D-202ENST00000460333 ANKRD20A2Q5SQ80 823 aa6.68□□□□□ -1.34
VPS13D-202ENST00000460333 ANKRD20A1Q5TYW2 823 aa6.68□□□□□ -1.34
VPS13D-202ENST00000460333 WDR93Q6P2C0 686 aa6.68□□□□□ -1.34
VPS13D-202ENST00000460333 TCHHQ07283 1943 aa6.68□□□□□ -1.34
VPS13D-202ENST00000460333 LAMA4Q16363 1823 aa6.68□□□□□ -1.34
VPS13D-202ENST00000460333 FAM196BA6NMK8 535 aa6.68□□□□□ -1.34
VPS13D-202ENST00000460333 NDUFB10O96000 172 aa6.68□□□□□ -1.34
VPS13D-202ENST00000460333 ATP1A3P13637 1013 aa6.68□□□□□ -1.34
VPS13D-202ENST00000460333 DHX9Q08211 1270 aaKnown RBP6.68□□□□□ -1.34
VPS13D-202ENST00000460333 SPDYE2Q495Y8 402 aa6.68□□□□□ -1.34
VPS13D-202ENST00000460333 PDCD7Q8N8D1 485 aaKnown RBP6.68□□□□□ -1.34
VPS13D-202ENST00000460333 LARP4BQ92615 738 aaKnown RBP6.68□□□□□ -1.34
VPS13D-202ENST00000460333 CCT8L2Q96SF2 557 aa6.68□□□□□ -1.34
VPS13D-202ENST00000460333 ZNF341Q9BYN7 854 aa6.68□□□□□ -1.34
VPS13D-202ENST00000460333 DPH5Q9H2P9 285 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms