RNA–Protein interactions for RNA: ENST00000456331.6

PPP1R9A-208, Transcript of protein phosphatase 1 regulatory subunit 9A, humanhuman

TSL 1 (best) BASIC

Gene PPP1R9A, Length 10,090 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R9A-208ENST00000456331 DARS2Q6PI48 645 aaKnown RBP4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 RNF139Q8WU17 664 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 DCAF4Q8WV16 495 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 FAR2Q96K12 515 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 OSBPL5Q9H0X9 879 aaPredicted RBP4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 LMCD1Q9NZU5 365 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 ITIH6Q6UXX5 1313 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 ZBED1O96006 694 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 ABCB4P21439 1286 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 HSPA9P38646 679 aaKnown RBP4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 MRPL28Q13084 256 aaKnown RBP4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 PTK2BQ14289 1009 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 OLFML2BQ68BL8 750 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 MMS19Q96T76 1030 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 MRPS26Q9BYN8 205 aaKnown RBP4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 PRRG3Q9BZD7 231 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 TAF1DQ9H5J8 278 aaPredicted RBP4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 TMEM63CQ9P1W3 806 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 CAPN11Q9UMQ6 739 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 AP3M1Q9Y2T2 418 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 FARP1Q9Y4F1 1045 aaPredicted RBP4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 PCDHA13Q9Y5I0 950 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 ARAP3Q8WWN8 1544 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 ZMYM2Q9UBW7 1377 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 ZRANB2O95218 330 aaKnown RBP eCLIP4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 FAM107AO95990 144 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 MYCNP04198 464 aaPredicted RBP4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 CCND1P24385 295 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 PPP2R2AP63151 447 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 SFSWAPQ12872 951 aaKnown RBP4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 EFTUD2Q15029 972 aaKnown RBP eCLIP4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 KBTBD12Q3ZCT8 623 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 SCYL2Q6P3W7 929 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 DYMQ7RTS9 669 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 APPL1Q9UKG1 709 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 MORC2Q9Y6X9 1032 aaPredicted RBP4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 MAP3K19Q56UN5 1328 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 SPDYE16A6NNV3 312 aaPredicted RBP4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 PDE8BO95263 885 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 RALBP11234 206 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 MXI1P50539 228 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 KCNQ4P56696 695 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 EHHADHQ08426 723 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 MAPK6Q16659 721 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 P3H1Q32P28 736 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 SPDYE2Q495Y8 402 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 TCP11X2Q5H9J9 407 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 AGBL2Q5U5Z8 902 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 LRRC8EQ6NSJ5 796 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 ZNF677Q86XU0 584 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 MGARPQ8TDB4 240 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 SMCR8Q8TEV9 937 aaPredicted RBP4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 VPS33BQ9H267 617 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 STMN3Q9NZ72 180 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 TRPC5Q9UL62 973 aaPredicted RBP4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 THRAP3Q9Y2W1 955 aaKnown RBP4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 CUL9Q8IWT3 2517 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 CHMP2AO43633 222 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 ADCY3O60266 1144 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 NNMTP40261 264 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 KCTD2Q14681 263 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 MFN1Q8IWA4 741 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 SIX6OS1Q8N1H7 587 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 NLGN1Q8N2Q7 840 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 LINC00301Q8NCQ3 95 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 PGBD1Q96JS3 809 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 ZNF577Q9BSK1 485 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 NDST4Q9H3R1 872 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 KMT5AQ9NQR1 393 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 GCNT4Q9P109 453 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 CLEC11AQ9Y240 323 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 AP4S1Q9Y587 144 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 IGF2BP3O00425 579 aaKnown RBP eCLIP4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 STRNO43815 780 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 KRT1P04264 644 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 TECP42680 631 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 LIG3P49916 1009 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 KCNB1Q14721 858 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 TERF2Q15554 542 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 TTBK2Q6IQ55 1244 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 TRIM67Q6ZTA4 783 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 CALML6Q8TD86 181 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 TRIM63Q969Q1 353 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 SNF8Q96H20 258 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 UBN1Q9NPG3 1134 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 DISC1Q9NRI5 854 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 KRT82Q9NSB4 513 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 VPS54Q9P1Q0 977 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 INTUQ9ULD6 942 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 PCDHGB4Q9UN71 923 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 MAP1BP46821 2468 aaKnown RBP4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 POC1B-GALNT4F8VUJ3 575 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 KCNA6P17658 529 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 CYLC2Q14093 348 aaPredicted RBP4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 ANKS3Q6ZW76 656 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 SLC35F6Q8N357 371 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 DBNDD2Q9BQY9 259 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.29□□□□□ -1.721e-7■■■□□ 17.4
PPP1R9A-208ENST00000456331 NMRK1Q9NWW6 199 aa4.29□□□□□ -1.72
PPP1R9A-208ENST00000456331 ABCB11O95342 1321 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms