RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 C17orf80Q9BSJ5 609 aa18.04■□□□□ 0.48
SGCE-208ENST00000450385 C11orf84Q9BUA3 381 aaPredicted RBP18.04■□□□□ 0.48
SGCE-208ENST00000450385 ERVK-5Q9HDB9 667 aa18.04■□□□□ 0.48
SGCE-208ENST00000450385 RGS18Q9NS28 235 aa18.04■□□□□ 0.48
SGCE-208ENST00000450385 TDP2O95551 362 aa18.03■□□□□ 0.48
SGCE-208ENST00000450385 KRT2P35908 639 aa18.03■□□□□ 0.48
SGCE-208ENST00000450385 SARSP49591 514 aaKnown RBP18.03■□□□□ 0.48
SGCE-208ENST00000450385 PSMC5P62195 406 aa18.03■□□□□ 0.48
SGCE-208ENST00000450385 TBC1D8BQ0IIM8 1120 aa18.03■□□□□ 0.48
SGCE-208ENST00000450385 TMEM62Q0P6H9 643 aa18.03■□□□□ 0.48
SGCE-208ENST00000450385 NFX1Q12986 1120 aaKnown RBP18.03■□□□□ 0.48
SGCE-208ENST00000450385 TRIM29Q14134 588 aa18.03■□□□□ 0.48
SGCE-208ENST00000450385 BTG3Q14201 252 aaPredicted RBP18.03■□□□□ 0.48
SGCE-208ENST00000450385 TIGD5Q53EQ6 642 aa18.03■□□□□ 0.48
SGCE-208ENST00000450385 GDPD5Q8WTR4 605 aa18.03■□□□□ 0.48
SGCE-208ENST00000450385 RSPH1Q8WYR4 309 aa18.03■□□□□ 0.48
SGCE-208ENST00000450385 P2RX5Q93086 422 aa18.03■□□□□ 0.48
SGCE-208ENST00000450385 LLPHQ9BRT6 129 aaKnown RBP18.03■□□□□ 0.48
SGCE-208ENST00000450385 ELAC1Q9H777 363 aaKnown RBP18.03■□□□□ 0.48
SGCE-208ENST00000450385 ST3GAL5Q9UNP4 418 aa18.03■□□□□ 0.48
SGCE-208ENST00000450385 LIMCH1Q9UPQ0 1083 aa18.03■□□□□ 0.48
SGCE-208ENST00000450385 PCDHB7Q9Y5E2 793 aa18.03■□□□□ 0.48
SGCE-208ENST00000450385 DENND3A2RUS2 1198 aa18.02■□□□□ 0.48
SGCE-208ENST00000450385 P4HBP07237 508 aaKnown RBP18.02■□□□□ 0.48
SGCE-208ENST00000450385 FDPSP14324 419 aaKnown RBP18.02■□□□□ 0.48
SGCE-208ENST00000450385 EIF4BP23588 611 aaKnown RBP18.02■□□□□ 0.48
SGCE-208ENST00000450385 QARSP47897 775 aaKnown RBP18.02■□□□□ 0.48
SGCE-208ENST00000450385 FAM189BP81408 668 aa18.02■□□□□ 0.48
SGCE-208ENST00000450385 GPM6BQ13491 265 aa18.02■□□□□ 0.48
SGCE-208ENST00000450385 NSUN7Q8NE18 718 aaKnown RBP18.02■□□□□ 0.48
SGCE-208ENST00000450385 ZBTB10Q96DT7 871 aa18.02■□□□□ 0.48
SGCE-208ENST00000450385 ZSCAN31Q96LW9 406 aaPredicted RBP18.02■□□□□ 0.48
SGCE-208ENST00000450385 MTUS1Q9ULD2 1270 aa18.02■□□□□ 0.48
SGCE-208ENST00000450385 LRFN2Q9ULH4 789 aa18.02■□□□□ 0.48
SGCE-208ENST00000450385 NOC2LQ9Y3T9 749 aaKnown RBP18.02■□□□□ 0.48
SGCE-208ENST00000450385 IGKV6-21A0A0C4DH24 114 aa18.01■□□□□ 0.47
SGCE-208ENST00000450385 CHMP2AO43633 222 aa18.01■□□□□ 0.47
SGCE-208ENST00000450385 MARCH6O60337 910 aa18.01■□□□□ 0.47
SGCE-208ENST00000450385 CCNT1O60563 726 aaKnown RBP18.01■□□□□ 0.47
SGCE-208ENST00000450385 KIZQ2M2Z5 673 aa18.01■□□□□ 0.47
SGCE-208ENST00000450385 PIK3AP1Q6ZUJ8 805 aa18.01■□□□□ 0.47
SGCE-208ENST00000450385 LINC01599Q8WXQ3 324 aa18.01■□□□□ 0.47
SGCE-208ENST00000450385 UIMC1Q96RL1 719 aa18.01■□□□□ 0.47
SGCE-208ENST00000450385 INO80BQ9C086 356 aaPredicted RBP18.01■□□□□ 0.47
SGCE-208ENST00000450385 ADAMTS10Q9H324 1103 aa18.01■□□□□ 0.47
SGCE-208ENST00000450385 TMX1Q9H3N1 280 aa18.01■□□□□ 0.47
SGCE-208ENST00000450385 PRDM6Q9NQX0 595 aa18.01■□□□□ 0.47
SGCE-208ENST00000450385 AKT3Q9Y243 479 aa18.01■□□□□ 0.47
SGCE-208ENST00000450385 BRWD1Q9NSI6 2320 aa18.01■□□□□ 0.47
SGCE-208ENST00000450385 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18■□□□□ 0.47
SGCE-208ENST00000450385 HOXA2O43364 376 aa18■□□□□ 0.47
SGCE-208ENST00000450385 GAS2O43903 313 aaKnown RBP18■□□□□ 0.47
SGCE-208ENST00000450385 MMP1P03956 469 aa18■□□□□ 0.47
SGCE-208ENST00000450385 BMP1P13497 986 aa18■□□□□ 0.47
SGCE-208ENST00000450385 ZSCAN20P17040 1043 aaPredicted RBP18■□□□□ 0.47
SGCE-208ENST00000450385 NLRP11P59045 1033 aaKnown RBP18■□□□□ 0.47
SGCE-208ENST00000450385 EPHA7Q15375 998 aa18■□□□□ 0.47
SGCE-208ENST00000450385 CSPP1Q1MSJ5 1256 aa18■□□□□ 0.47
SGCE-208ENST00000450385 PUS10Q3MIT2 529 aaKnown RBP18■□□□□ 0.47
SGCE-208ENST00000450385 OTUD6AQ7L8S5 288 aa18■□□□□ 0.47
SGCE-208ENST00000450385 SPRED2Q7Z698 418 aa18■□□□□ 0.47
SGCE-208ENST00000450385 ADAM2Q99965 735 aa18■□□□□ 0.47
SGCE-208ENST00000450385 CDHR5Q9HBB8 845 aa18■□□□□ 0.47
SGCE-208ENST00000450385 CHST12Q9NRB3 414 aa18■□□□□ 0.47
SGCE-208ENST00000450385 SH2B1Q9NRF2 756 aaPredicted RBP18■□□□□ 0.47
SGCE-208ENST00000450385 GINS2Q9Y248 185 aa18■□□□□ 0.47
SGCE-208ENST00000450385 CARNS1A5YM72 827 aa17.99■□□□□ 0.47
SGCE-208ENST00000450385 C9IYK1 514 aa17.99■□□□□ 0.47
SGCE-208ENST00000450385 SLC37A4O43826 429 aa17.99■□□□□ 0.47
SGCE-208ENST00000450385 MAFO75444 373 aaPredicted RBP17.99■□□□□ 0.47
SGCE-208ENST00000450385 STBD1O95210 358 aa17.99■□□□□ 0.47
SGCE-208ENST00000450385 VTNP04004 478 aa17.99■□□□□ 0.47
SGCE-208ENST00000450385 CTNNB1P35222 781 aa17.99■□□□□ 0.47
SGCE-208ENST00000450385 GPC3P51654 580 aa17.99■□□□□ 0.47
SGCE-208ENST00000450385 SAFBQ15424 915 aaKnown RBP eCLIP17.99■□□□□ 0.47
SGCE-208ENST00000450385 ZNF410Q86VK4 478 aa17.99■□□□□ 0.47
SGCE-208ENST00000450385 C4orf19Q8IY42 314 aa17.99■□□□□ 0.47
SGCE-208ENST00000450385 NECAB1Q8N987 351 aa17.99■□□□□ 0.47
SGCE-208ENST00000450385 BANK1Q8NDB2 785 aa17.99■□□□□ 0.47
SGCE-208ENST00000450385 TMEM40Q8WWA1 233 aa17.99■□□□□ 0.47
SGCE-208ENST00000450385 TNFRSF25Q93038 417 aa17.99■□□□□ 0.47
SGCE-208ENST00000450385 CEP89Q96ST8 783 aa17.99■□□□□ 0.47
SGCE-208ENST00000450385 OSMRQ99650 979 aa17.99■□□□□ 0.47
SGCE-208ENST00000450385 AAASQ9NRG9 546 aa17.99■□□□□ 0.47
SGCE-208ENST00000450385 TMEM161AQ9NX61 479 aa17.99■□□□□ 0.47
SGCE-208ENST00000450385 DACT1Q9NYF0 836 aa17.99■□□□□ 0.47
SGCE-208ENST00000450385 VAV3Q9UKW4 847 aa17.99■□□□□ 0.47
SGCE-208ENST00000450385 FNDC1Q4ZHG4 1894 aaPredicted RBP17.99■□□□□ 0.47
SGCE-208ENST00000450385 DDX11L8A8MPP1 907 aa17.98■□□□□ 0.47
SGCE-208ENST00000450385 TNFRSF10AO00220 468 aa17.98■□□□□ 0.47
SGCE-208ENST00000450385 SEC24BO95487 1268 aa17.98■□□□□ 0.47
SGCE-208ENST00000450385 EOMESO95936 686 aa17.98■□□□□ 0.47
SGCE-208ENST00000450385 LINC00271P0C7V0 271 aa17.98■□□□□ 0.47
SGCE-208ENST00000450385 CLCN3P51790 818 aa17.98■□□□□ 0.47
SGCE-208ENST00000450385 HMGN5P82970 282 aaKnown RBP17.98■□□□□ 0.47
SGCE-208ENST00000450385 ORC2Q13416 577 aaPredicted RBP17.98■□□□□ 0.47
SGCE-208ENST00000450385 DSC3Q14574 896 aa17.98■□□□□ 0.47
SGCE-208ENST00000450385 UGCGQ16739 394 aa17.98■□□□□ 0.47
SGCE-208ENST00000450385 TMEM266Q2M3C6 531 aa17.98■□□□□ 0.47
SGCE-208ENST00000450385 KRT40Q6A162 431 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms