RNA–Protein interactions for RNA: ENST00000450000.5

CPSF7-208, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-208ENST00000450000 ZSCAN20P17040 1043 aaPredicted RBP24.71■■□□□ 1.55
CPSF7-208ENST00000450000 AK2P54819 239 aa24.71■■□□□ 1.55
CPSF7-208ENST00000450000 NLRP11P59045 1033 aaKnown RBP24.71■■□□□ 1.55
CPSF7-208ENST00000450000 TCEAL5Q5H9L2 206 aa24.71■■□□□ 1.55
CPSF7-208ENST00000450000 SLC24A5Q71RS6 500 aa24.71■■□□□ 1.55
CPSF7-208ENST00000450000 LRRC71Q8N4P6 559 aa24.71■■□□□ 1.55
CPSF7-208ENST00000450000 CLP1Q92989 425 aaKnown RBP24.71■■□□□ 1.55
CPSF7-208ENST00000450000 PPP2R3CQ969Q6 453 aa24.71■■□□□ 1.55
CPSF7-208ENST00000450000 PHF20Q9BVI0 1012 aa24.71■■□□□ 1.55
CPSF7-208ENST00000450000 TMX1Q9H3N1 280 aa24.71■■□□□ 1.55
CPSF7-208ENST00000450000 COL4A6Q14031 1691 aa24.7■■□□□ 1.54
CPSF7-208ENST00000450000 NCK2O43639 380 aa24.7■■□□□ 1.54
CPSF7-208ENST00000450000 DNM2P50570 870 aa24.7■■□□□ 1.54
CPSF7-208ENST00000450000 XKR3Q5GH77 459 aa24.7■■□□□ 1.54
CPSF7-208ENST00000450000 NEK8Q86SG6 692 aa24.7■■□□□ 1.54
CPSF7-208ENST00000450000 TMEM40Q8WWA1 233 aa24.7■■□□□ 1.54
CPSF7-208ENST00000450000 RC3H2Q9HBD1 1191 aaKnown RBP24.7■■□□□ 1.54
CPSF7-208ENST00000450000 ATP6V0A4Q9HBG4 840 aa24.7■■□□□ 1.54
CPSF7-208ENST00000450000 AAASQ9NRG9 546 aa24.7■■□□□ 1.54
CPSF7-208ENST00000450000 RGS18Q9NS28 235 aa24.7■■□□□ 1.54
CPSF7-208ENST00000450000 MRPL42Q9Y6G3 142 aaKnown RBP24.7■■□□□ 1.54
CPSF7-208ENST00000450000 M0R2N6 131 aa24.69■■□□□ 1.54
CPSF7-208ENST00000450000 EDIL3O43854 480 aa24.69■■□□□ 1.54
CPSF7-208ENST00000450000 ZNF862O60290 1169 aa24.69■■□□□ 1.54
CPSF7-208ENST00000450000 CCNT1O60563 726 aaKnown RBP24.69■■□□□ 1.54
CPSF7-208ENST00000450000 DKC1O60832 514 aaKnown RBP eCLIP24.69■■□□□ 1.54
CPSF7-208ENST00000450000 GPR32O75388 356 aa24.69■■□□□ 1.54
CPSF7-208ENST00000450000 GCFC2P16383 781 aaKnown RBP24.69■■□□□ 1.54
CPSF7-208ENST00000450000 MTERF2Q49AM1 385 aa24.69■■□□□ 1.54
CPSF7-208ENST00000450000 NAALADL2Q58DX5 795 aa24.69■■□□□ 1.54
CPSF7-208ENST00000450000 PIK3AP1Q6ZUJ8 805 aa24.69■■□□□ 1.54
CPSF7-208ENST00000450000 NLRP7Q8WX94 980 aa24.69■■□□□ 1.54
CPSF7-208ENST00000450000 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP24.68■■□□□ 1.54
CPSF7-208ENST00000450000 DDX11L8A8MPP1 907 aa24.68■■□□□ 1.54
CPSF7-208ENST00000450000 GRM6O15303 877 aa24.68■■□□□ 1.54
CPSF7-208ENST00000450000 CDC42EP1Q00587 391 aa24.68■■□□□ 1.54
CPSF7-208ENST00000450000 TRIM29Q14134 588 aa24.68■■□□□ 1.54
CPSF7-208ENST00000450000 UGCGQ16739 394 aa24.68■■□□□ 1.54
CPSF7-208ENST00000450000 PUS10Q3MIT2 529 aaKnown RBP24.68■■□□□ 1.54
CPSF7-208ENST00000450000 LEXMQ3ZCV2 418 aa24.68■■□□□ 1.54
CPSF7-208ENST00000450000 FAM228AQ86W67 206 aa24.68■■□□□ 1.54
CPSF7-208ENST00000450000 ALG13Q9NP73 1137 aaKnown RBP24.68■■□□□ 1.54
CPSF7-208ENST00000450000 FAM50BQ9Y247 325 aa24.68■■□□□ 1.54
CPSF7-208ENST00000450000 PCDHB12Q9Y5F1 795 aa24.68■■□□□ 1.54
CPSF7-208ENST00000450000 TBKBP1A7MCY6 615 aa24.67■■□□□ 1.54
CPSF7-208ENST00000450000 BAG4O95429 457 aaKnown RBP24.67■■□□□ 1.54
CPSF7-208ENST00000450000 KRT2P35908 639 aa24.67■■□□□ 1.54
CPSF7-208ENST00000450000 ETNPPLQ8TBG4 499 aa24.67■■□□□ 1.54
CPSF7-208ENST00000450000 P2RX5Q93086 422 aa24.67■■□□□ 1.54
CPSF7-208ENST00000450000 FAM20AQ96MK3 541 aa24.67■■□□□ 1.54
CPSF7-208ENST00000450000 CLDND1Q9NY35 253 aa24.67■■□□□ 1.54
CPSF7-208ENST00000450000 MGEA5O60502 916 aa24.66■■□□□ 1.54
CPSF7-208ENST00000450000 EIF4BP23588 611 aaKnown RBP24.66■■□□□ 1.54
CPSF7-208ENST00000450000 NEK4P51957 841 aa24.66■■□□□ 1.54
CPSF7-208ENST00000450000 PSMC5P62195 406 aa24.66■■□□□ 1.54
CPSF7-208ENST00000450000 NPY5RQ15761 445 aa24.66■■□□□ 1.54
CPSF7-208ENST00000450000 PPP4R3AQ6IN85 833 aa24.66■■□□□ 1.54
CPSF7-208ENST00000450000 ABI1Q8IZP0 508 aa24.66■■□□□ 1.54
CPSF7-208ENST00000450000 NECAB1Q8N987 351 aa24.66■■□□□ 1.54
CPSF7-208ENST00000450000 PABPC5Q96DU9 382 aaKnown RBP24.66■■□□□ 1.54
CPSF7-208ENST00000450000 ZNF668Q96K58 619 aaPredicted RBP24.66■■□□□ 1.54
CPSF7-208ENST00000450000 MBOAT7Q96N66 472 aa24.66■■□□□ 1.54
CPSF7-208ENST00000450000 JPH2Q9BR39 696 aaPredicted RBP24.66■■□□□ 1.54
CPSF7-208ENST00000450000 PLAGL2Q9UPG8 496 aa24.66■■□□□ 1.54
CPSF7-208ENST00000450000 VCANP13611 3396 aa24.65■■□□□ 1.54
CPSF7-208ENST00000450000 HOXA2O43364 376 aa24.65■■□□□ 1.54
CPSF7-208ENST00000450000 SLC37A4O43826 429 aa24.65■■□□□ 1.54
CPSF7-208ENST00000450000 MMP1P03956 469 aa24.65■■□□□ 1.54
CPSF7-208ENST00000450000 GATMP50440 423 aa24.65■■□□□ 1.54
CPSF7-208ENST00000450000 PTCRAQ6ISU1 281 aaPredicted RBP24.65■■□□□ 1.54
CPSF7-208ENST00000450000 NIFKQ9BYG3 293 aaKnown RBP24.65■■□□□ 1.54
CPSF7-208ENST00000450000 GCOM2Q9BZD3 368 aaPredicted RBP24.65■■□□□ 1.54
CPSF7-208ENST00000450000 IGFLR1Q9H665 355 aa24.65■■□□□ 1.54
CPSF7-208ENST00000450000 TMEM161AQ9NX61 479 aa24.65■■□□□ 1.54
CPSF7-208ENST00000450000 C9IYK1 514 aa24.64■■□□□ 1.54
CPSF7-208ENST00000450000 H3BQ06 376 aaPredicted RBP24.64■■□□□ 1.54
CPSF7-208ENST00000450000 GPC3P51654 580 aa24.64■■□□□ 1.54
CPSF7-208ENST00000450000 CRIPAKQ8N1N5 446 aa24.64■■□□□ 1.54
CPSF7-208ENST00000450000 KLHL23Q8NBE8 558 aa24.64■■□□□ 1.54
CPSF7-208ENST00000450000 RNF169Q8NCN4 708 aa24.64■■□□□ 1.54
CPSF7-208ENST00000450000 MICAL1Q8TDZ2 1067 aa24.64■■□□□ 1.54
CPSF7-208ENST00000450000 ADAMTS10Q9H324 1103 aa24.64■■□□□ 1.54
CPSF7-208ENST00000450000 ELAC1Q9H777 363 aaKnown RBP24.64■■□□□ 1.54
CPSF7-208ENST00000450000 GJB4Q9NTQ9 266 aa24.64■■□□□ 1.54
CPSF7-208ENST00000450000 TTC3P53804 2025 aa24.64■■□□□ 1.53
CPSF7-208ENST00000450000 DTNBO60941 627 aa24.63■■□□□ 1.53
CPSF7-208ENST00000450000 QARSP47897 775 aaKnown RBP24.63■■□□□ 1.53
CPSF7-208ENST00000450000 ME3Q16798 604 aa24.63■■□□□ 1.53
CPSF7-208ENST00000450000 FAM102BQ5T8I3 360 aa24.63■■□□□ 1.53
CPSF7-208ENST00000450000 EXOC8Q8IYI6 725 aa24.63■■□□□ 1.53
CPSF7-208ENST00000450000 SLFN12Q8IYM2 578 aa24.63■■□□□ 1.53
CPSF7-208ENST00000450000 LINC01465Q8N7H1 131 aa24.63■■□□□ 1.53
CPSF7-208ENST00000450000 OXER1Q8TDS5 423 aa24.63■■□□□ 1.53
CPSF7-208ENST00000450000 GTF3C6Q969F1 213 aa24.63■■□□□ 1.53
CPSF7-208ENST00000450000 INO80BQ9C086 356 aaPredicted RBP24.63■■□□□ 1.53
CPSF7-208ENST00000450000 DACT1Q9NYF0 836 aa24.63■■□□□ 1.53
CPSF7-208ENST00000450000 TTC28Q96AY4 2481 aa24.63■■□□□ 1.53
CPSF7-208ENST00000450000 TBX3O15119 743 aa24.62■■□□□ 1.53
CPSF7-208ENST00000450000 CTDNEP1O95476 244 aa24.62■■□□□ 1.53
CPSF7-208ENST00000450000 LINC00271P0C7V0 271 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms