RNA–Protein interactions for RNA: ENST00000449395.5

PRDM15-208, Transcript of PR/SET domain 15, humanhuman

TSL 1 (best)

Gene PRDM15, Length 6,662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM15-208ENST00000449395 ABCD1P33897 745 aa11.33□□□□□ -0.6
PRDM15-208ENST00000449395 SERPINB6P35237 376 aa11.33□□□□□ -0.6
PRDM15-208ENST00000449395 EIF4A3P38919 411 aaKnown RBP11.33□□□□□ -0.6
PRDM15-208ENST00000449395 TFAMQ00059 246 aaKnown RBP11.33□□□□□ -0.6
PRDM15-208ENST00000449395 ASPHQ12797 758 aa11.33□□□□□ -0.6
PRDM15-208ENST00000449395 BFSP2Q13515 415 aa11.33□□□□□ -0.6
PRDM15-208ENST00000449395 DDX53Q86TM3 631 aaKnown RBP11.33□□□□□ -0.6
PRDM15-208ENST00000449395 VSTM4Q8IW00 320 aa11.33□□□□□ -0.6
PRDM15-208ENST00000449395 MRPL47Q9HD33 250 aaKnown RBP11.33□□□□□ -0.6
PRDM15-208ENST00000449395 PIH1D3Q9NQM4 214 aaKnown RBP11.33□□□□□ -0.6
PRDM15-208ENST00000449395 PCDHA13Q9Y5I0 950 aa11.33□□□□□ -0.6
PRDM15-208ENST00000449395 MCF2LO15068 1137 aa11.33□□□□□ -0.6
PRDM15-208ENST00000449395 ZBED6P86452 979 aa11.33□□□□□ -0.6
PRDM15-208ENST00000449395 PPP1R2P3Q6NXS1 205 aa11.33□□□□□ -0.6
PRDM15-208ENST00000449395 FOXP4Q8IVH2 680 aaPredicted RBP11.33□□□□□ -0.6
PRDM15-208ENST00000449395 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.33□□□□□ -0.6
PRDM15-208ENST00000449395 ZNF280CQ8ND82 737 aa11.33□□□□□ -0.6
PRDM15-208ENST00000449395 CDHR1Q96JP9 859 aa11.33□□□□□ -0.6
PRDM15-208ENST00000449395 KATNAL1Q9BW62 490 aa11.33□□□□□ -0.6
PRDM15-208ENST00000449395 KIF1BO60333 1816 aa11.33□□□□□ -0.6
PRDM15-208ENST00000449395 MAP3K7O43318 606 aa11.33□□□□□ -0.6
PRDM15-208ENST00000449395 MED7O43513 233 aa11.33□□□□□ -0.6
PRDM15-208ENST00000449395 MAP2K2P36507 400 aa11.33□□□□□ -0.6
PRDM15-208ENST00000449395 STAT3P40763 770 aa11.33□□□□□ -0.6
PRDM15-208ENST00000449395 LIFRP42702 1097 aa11.33□□□□□ -0.6
PRDM15-208ENST00000449395 NECTIN1Q15223 517 aa11.33□□□□□ -0.6
PRDM15-208ENST00000449395 DDX27Q96GQ7 796 aaKnown RBP11.33□□□□□ -0.6
PRDM15-208ENST00000449395 AIFM3Q96NN9 605 aa11.33□□□□□ -0.6
PRDM15-208ENST00000449395 SLC38A10Q9HBR0 1119 aa11.33□□□□□ -0.6
PRDM15-208ENST00000449395 GPC4O75487 556 aa11.32□□□□□ -0.6
PRDM15-208ENST00000449395 CYP19A1P11511 503 aaPredicted RBP11.32□□□□□ -0.6
PRDM15-208ENST00000449395 MTERF2Q49AM1 385 aa11.32□□□□□ -0.6
PRDM15-208ENST00000449395 SIRT2Q8IXJ6 389 aa11.32□□□□□ -0.6
PRDM15-208ENST00000449395 CPP00450 1065 aa11.32□□□□□ -0.6
PRDM15-208ENST00000449395 CCNYQ8ND76 341 aa11.32□□□□□ -0.6
PRDM15-208ENST00000449395 STAG1Q8WVM7 1258 aa11.32□□□□□ -0.6
PRDM15-208ENST00000449395 SPTLC3Q9NUV7 552 aa11.32□□□□□ -0.6
PRDM15-208ENST00000449395 RNF14Q9UBS8 474 aa11.32□□□□□ -0.6
PRDM15-208ENST00000449395 ZNF70Q9UC06 446 aaPredicted RBP11.32□□□□□ -0.6
PRDM15-208ENST00000449395 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.32□□□□□ -0.6
PRDM15-208ENST00000449395 FER1L4A9Z1Z3 1794 aa11.32□□□□□ -0.6
PRDM15-208ENST00000449395 KPNA1P52294 538 aaPredicted RBP11.32□□□□□ -0.6
PRDM15-208ENST00000449395 DYNLT1P63172 113 aa11.32□□□□□ -0.6
PRDM15-208ENST00000449395 DNAJC24Q6P3W2 148 aa11.32□□□□□ -0.6
PRDM15-208ENST00000449395 DCLK2Q8N568 766 aa11.32□□□□□ -0.6
PRDM15-208ENST00000449395 BAG5Q9UL15 447 aa11.32□□□□□ -0.6
PRDM15-208ENST00000449395 ADCY10Q96PN6 1610 aa11.32□□□□□ -0.6
PRDM15-208ENST00000449395 PNMA6FA0A0J9YX94 578 aa11.32□□□□□ -0.6
PRDM15-208ENST00000449395 MSH2P43246 934 aa11.32□□□□□ -0.6
PRDM15-208ENST00000449395 PDXDC2PQ6P474 469 aa11.32□□□□□ -0.6
PRDM15-208ENST00000449395 NDUFA10O95299 355 aa11.32□□□□□ -0.6
PRDM15-208ENST00000449395 S100BP04271 92 aaPredicted RBP11.32□□□□□ -0.6
PRDM15-208ENST00000449395 ADCY1Q08828 1119 aa11.32□□□□□ -0.6
PRDM15-208ENST00000449395 IFT88Q13099 833 aa11.32□□□□□ -0.6
PRDM15-208ENST00000449395 RASGRF1Q13972 1273 aa11.32□□□□□ -0.6
PRDM15-208ENST00000449395 LLGL1Q15334 1064 aa11.32□□□□□ -0.6
PRDM15-208ENST00000449395 TMED2Q15363 201 aa11.32□□□□□ -0.6
PRDM15-208ENST00000449395 SNCBQ16143 134 aa11.32□□□□□ -0.6
PRDM15-208ENST00000449395 CDC37Q16543 378 aaPredicted RBP11.32□□□□□ -0.6
PRDM15-208ENST00000449395 TCP11X2Q5H9J9 407 aa11.32□□□□□ -0.6
PRDM15-208ENST00000449395 LRGUKQ96M69 825 aa11.32□□□□□ -0.6
PRDM15-208ENST00000449395 NXF1Q9UBU9 619 aaKnown RBP11.32□□□□□ -0.6
PRDM15-208ENST00000449395 ZNF521Q96K83 1311 aa11.31□□□□□ -0.6
PRDM15-208ENST00000449395 CDK8P49336 464 aa11.31□□□□□ -0.6
PRDM15-208ENST00000449395 BBS5Q8N3I7 341 aa11.31□□□□□ -0.6
PRDM15-208ENST00000449395 GTF3C2Q8WUA4 911 aaPredicted RBP11.31□□□□□ -0.6
PRDM15-208ENST00000449395 ZNF668Q96K58 619 aaPredicted RBP11.31□□□□□ -0.6
PRDM15-208ENST00000449395 PANX2Q96RD6 677 aa11.31□□□□□ -0.6
PRDM15-208ENST00000449395 CRAMP1Q96RY5 1269 aa11.31□□□□□ -0.6
PRDM15-208ENST00000449395 TMEM39BQ9GZU3 492 aa11.31□□□□□ -0.6
PRDM15-208ENST00000449395 ESYT2A0FGR8 921 aa11.31□□□□□ -0.6
PRDM15-208ENST00000449395 ARHGEF37A1IGU5 675 aa11.31□□□□□ -0.6
PRDM15-208ENST00000449395 HOXA7P31268 230 aaPredicted RBP11.31□□□□□ -0.6
PRDM15-208ENST00000449395 KCTD6Q8NC69 237 aa11.31□□□□□ -0.6
PRDM15-208ENST00000449395 SHCBP1Q8NEM2 672 aa11.31□□□□□ -0.6
PRDM15-208ENST00000449395 PTCH1Q13635 1447 aa11.31□□□□□ -0.6
PRDM15-208ENST00000449395 PI4K2BG5E9Z4 385 aa11.31□□□□□ -0.6
PRDM15-208ENST00000449395 CLGNO14967 610 aa11.31□□□□□ -0.6
PRDM15-208ENST00000449395 COPB2P35606 906 aa11.31□□□□□ -0.6
PRDM15-208ENST00000449395 DDIT3P35638 169 aa11.31□□□□□ -0.6
PRDM15-208ENST00000449395 RCN2Q14257 317 aa11.31□□□□□ -0.6
PRDM15-208ENST00000449395 VEPH1Q14D04 833 aa11.31□□□□□ -0.6
PRDM15-208ENST00000449395 SCN4BQ8IWT1 228 aa11.31□□□□□ -0.6
PRDM15-208ENST00000449395 THEM5Q8N1Q8 247 aa11.31□□□□□ -0.6
PRDM15-208ENST00000449395 CDCA5Q96FF9 252 aa11.31□□□□□ -0.6
PRDM15-208ENST00000449395 CEP170BQ9Y4F5 1589 aaPredicted RBP11.31□□□□□ -0.6
PRDM15-208ENST00000449395 MXI1P50539 228 aa11.31□□□□□ -0.6
PRDM15-208ENST00000449395 PDE1CQ14123 709 aaPredicted RBP11.31□□□□□ -0.6
PRDM15-208ENST00000449395 DARS2Q6PI48 645 aaKnown RBP11.31□□□□□ -0.6
PRDM15-208ENST00000449395 RAB44Q7Z6P3 723 aaPredicted RBP11.31□□□□□ -0.6
PRDM15-208ENST00000449395 TRIM42Q8IWZ5 723 aa11.31□□□□□ -0.6
PRDM15-208ENST00000449395 NDST4Q9H3R1 872 aa11.31□□□□□ -0.6
PRDM15-208ENST00000449395 THPOP40225 353 aa11.31□□□□□ -0.6
PRDM15-208ENST00000449395 LRRC63Q05C16 580 aa11.31□□□□□ -0.6
PRDM15-208ENST00000449395 ARL6IP4Q66PJ3 421 aaKnown RBP11.31□□□□□ -0.6
PRDM15-208ENST00000449395 CES5AQ6NT32 575 aa11.31□□□□□ -0.6
PRDM15-208ENST00000449395 SDCCAG3Q96C92 435 aa11.31□□□□□ -0.6
PRDM15-208ENST00000449395 HAUS8Q9BT25 410 aa11.31□□□□□ -0.6
PRDM15-208ENST00000449395 GOLGA8QA0A0J9YX86 632 aa11.3□□□□□ -0.6
PRDM15-208ENST00000449395 GOLGA8OA6NCC3 632 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms