RNA–Protein interactions for RNA: ENST00000447784.1

LINC00408-201, long intergenic non-protein coding RNA 408, humanhuman

TSL 5 BASIC

Gene LINC00408, Length 560 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00408-201ENST00000447784 TRIOBPQ9H2D6 2365 aa12.92□□□□□ -0.34
LINC00408-201ENST00000447784 MAGEB2O15479 319 aa12.91□□□□□ -0.34
LINC00408-201ENST00000447784 PRPF40AO75400 957 aaKnown RBP12.91□□□□□ -0.34
LINC00408-201ENST00000447784 FGBP02675 491 aa12.91□□□□□ -0.34
LINC00408-201ENST00000447784 RFC2P35250 354 aa12.91□□□□□ -0.34
LINC00408-201ENST00000447784 RFC5P40937 340 aa12.91□□□□□ -0.34
LINC00408-201ENST00000447784 TBC1D8BQ0IIM8 1120 aa12.91□□□□□ -0.34
LINC00408-201ENST00000447784 GRIK4Q16099 956 aa12.91□□□□□ -0.34
LINC00408-201ENST00000447784 MTERF2Q49AM1 385 aa12.91□□□□□ -0.34
LINC00408-201ENST00000447784 HYIQ5T013 277 aa12.91□□□□□ -0.34
LINC00408-201ENST00000447784 RESP18Q5W5W9 173 aa12.91□□□□□ -0.34
LINC00408-201ENST00000447784 CLEC17AQ6ZS10 378 aa12.91□□□□□ -0.34
LINC00408-201ENST00000447784 USP49Q70CQ1 688 aa12.91□□□□□ -0.34
LINC00408-201ENST00000447784 ZNF365Q70YC5 407 aa12.91□□□□□ -0.34
LINC00408-201ENST00000447784 PDILTQ8N807 584 aa12.91□□□□□ -0.34
LINC00408-201ENST00000447784 FSIP1Q8NA03 581 aa12.91□□□□□ -0.34
LINC00408-201ENST00000447784 IQUBQ8NA54 791 aa12.91□□□□□ -0.34
LINC00408-201ENST00000447784 RETREG2Q8NC44 543 aa12.91□□□□□ -0.34
LINC00408-201ENST00000447784 PPP1R13LQ8WUF5 828 aa12.91□□□□□ -0.34
LINC00408-201ENST00000447784 SLC7A3Q8WY07 619 aa12.91□□□□□ -0.34
LINC00408-201ENST00000447784 HERVK_113Q902F9 699 aa12.91□□□□□ -0.34
LINC00408-201ENST00000447784 CCDC34Q96HJ3 373 aa12.91□□□□□ -0.34
LINC00408-201ENST00000447784 JPH2Q9BR39 696 aaPredicted RBP12.91□□□□□ -0.34
LINC00408-201ENST00000447784 CYP26B1Q9NR63 512 aa12.91□□□□□ -0.34
LINC00408-201ENST00000447784 WRAP73Q9P2S5 460 aaPredicted RBP12.91□□□□□ -0.34
LINC00408-201ENST00000447784 DBR1Q9UK59 544 aaKnown RBP12.91□□□□□ -0.34
LINC00408-201ENST00000447784 KCNH3Q9ULD8 1083 aa12.91□□□□□ -0.34
LINC00408-201ENST00000447784 COL1A2P08123 1366 aa12.91□□□□□ -0.34
LINC00408-201ENST00000447784 SCN10AQ9Y5Y9 1956 aa12.9□□□□□ -0.34
LINC00408-201ENST00000447784 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.9□□□□□ -0.34
LINC00408-201ENST00000447784 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.9□□□□□ -0.34
LINC00408-201ENST00000447784 PARNO95453 639 aaKnown RBP12.9□□□□□ -0.34
LINC00408-201ENST00000447784 EYA4O95677 639 aa12.9□□□□□ -0.34
LINC00408-201ENST00000447784 IQCF3P0C7M6 154 aa12.9□□□□□ -0.34
LINC00408-201ENST00000447784 ACRP10323 421 aa12.9□□□□□ -0.34
LINC00408-201ENST00000447784 PLCG1P19174 1290 aa12.9□□□□□ -0.34
LINC00408-201ENST00000447784 HOXC8P31273 242 aa12.9□□□□□ -0.34
LINC00408-201ENST00000447784 DNM2P50570 870 aa12.9□□□□□ -0.34
LINC00408-201ENST00000447784 POLGP54098 1239 aaPredicted RBP12.9□□□□□ -0.34
LINC00408-201ENST00000447784 PTK7Q13308 1070 aa12.9□□□□□ -0.34
LINC00408-201ENST00000447784 GRB10Q13322 594 aa12.9□□□□□ -0.34
LINC00408-201ENST00000447784 TMEM119Q4V9L6 283 aa12.9□□□□□ -0.34
LINC00408-201ENST00000447784 PLA2G4FQ68DD2 849 aa12.9□□□□□ -0.34
LINC00408-201ENST00000447784 ANO5Q75V66 913 aa12.9□□□□□ -0.34
LINC00408-201ENST00000447784 TMEM87AQ8NBN3 555 aa12.9□□□□□ -0.34
LINC00408-201ENST00000447784 SCLYQ96I15 445 aa12.9□□□□□ -0.34
LINC00408-201ENST00000447784 PNMA5Q96PV4 448 aa12.9□□□□□ -0.34
LINC00408-201ENST00000447784 MTIF3Q9H2K0 278 aaKnown RBP12.9□□□□□ -0.34
LINC00408-201ENST00000447784 BHMT2Q9H2M3 363 aa12.9□□□□□ -0.34
LINC00408-201ENST00000447784 STK17AQ9UEE5 414 aa12.9□□□□□ -0.34
LINC00408-201ENST00000447784 TUBE1Q9UJT0 475 aa12.9□□□□□ -0.34
LINC00408-201ENST00000447784 LAMA3Q16787 3333 aa12.89□□□□□ -0.35
LINC00408-201ENST00000447784 A0A087WWV3 80 aa12.89□□□□□ -0.35
LINC00408-201ENST00000447784 A0A1B0GVL5 298 aa12.89□□□□□ -0.35
LINC00408-201ENST00000447784 TMEM150BA6NC51 233 aa12.89□□□□□ -0.35
LINC00408-201ENST00000447784 E9PMD0 336 aa12.89□□□□□ -0.35
LINC00408-201ENST00000447784 POLR2DO15514 142 aaKnown RBP12.89□□□□□ -0.35
LINC00408-201ENST00000447784 STBD1O95210 358 aa12.89□□□□□ -0.35
LINC00408-201ENST00000447784 KRT18P05783 430 aaKnown RBP12.89□□□□□ -0.35
LINC00408-201ENST00000447784 PLA2G4BP0C869 781 aa12.89□□□□□ -0.35
LINC00408-201ENST00000447784 PFKFB1P16118 471 aa12.89□□□□□ -0.35
LINC00408-201ENST00000447784 KLRC1P26715 233 aa12.89□□□□□ -0.35
LINC00408-201ENST00000447784 TMOD1P28289 359 aa12.89□□□□□ -0.35
LINC00408-201ENST00000447784 SYKP43405 635 aa12.89□□□□□ -0.35
LINC00408-201ENST00000447784 RARRES1P49788 294 aa12.89□□□□□ -0.35
LINC00408-201ENST00000447784 NPEPPSP55786 919 aa12.89□□□□□ -0.35
LINC00408-201ENST00000447784 UBE2HP62256 183 aa12.89□□□□□ -0.35
LINC00408-201ENST00000447784 DHX8Q14562 1220 aaKnown RBP12.89□□□□□ -0.35
LINC00408-201ENST00000447784 ECM1Q16610 540 aa12.89□□□□□ -0.35
LINC00408-201ENST00000447784 TAF2Q6P1X5 1199 aa12.89□□□□□ -0.35
LINC00408-201ENST00000447784 PADI6Q6TGC4 694 aa12.89□□□□□ -0.35
LINC00408-201ENST00000447784 RSPH3Q86UC2 560 aa12.89□□□□□ -0.35
LINC00408-201ENST00000447784 CEP57L1Q8IYX8 460 aa12.89□□□□□ -0.35
LINC00408-201ENST00000447784 DEFB123Q8N688 67 aa12.89□□□□□ -0.35
LINC00408-201ENST00000447784 METTL13Q8N6R0 699 aa12.89□□□□□ -0.35
LINC00408-201ENST00000447784 LMBR1Q8WVP7 490 aa12.89□□□□□ -0.35
LINC00408-201ENST00000447784 DHX38Q92620 1227 aaKnown RBP12.89□□□□□ -0.35
LINC00408-201ENST00000447784 DHX58Q96C10 678 aa12.89□□□□□ -0.35
LINC00408-201ENST00000447784 VWCEQ96DN2 955 aa12.89□□□□□ -0.35
LINC00408-201ENST00000447784 SH2D3AQ9BRG2 576 aa12.89□□□□□ -0.35
LINC00408-201ENST00000447784 LRRC27Q9C0I9 530 aa12.89□□□□□ -0.35
LINC00408-201ENST00000447784 CUEDC2Q9H467 287 aa12.89□□□□□ -0.35
LINC00408-201ENST00000447784 SUGCTQ9HAC7 445 aa12.89□□□□□ -0.35
LINC00408-201ENST00000447784 BMP2KQ9NSY1 1161 aaPredicted RBP12.89□□□□□ -0.35
LINC00408-201ENST00000447784 USP25Q9UHP3 1055 aa12.89□□□□□ -0.35
LINC00408-201ENST00000447784 KIAA1217Q5T5P2 1943 aa12.89□□□□□ -0.35
LINC00408-201ENST00000447784 TMEM265A0A087WTH1 108 aa12.88□□□□□ -0.35
LINC00408-201ENST00000447784 ZBTB39O15060 712 aa12.88□□□□□ -0.35
LINC00408-201ENST00000447784 DGAT1O75907 488 aa12.88□□□□□ -0.35
LINC00408-201ENST00000447784 RPLP2P05387 115 aaKnown RBP12.88□□□□□ -0.35
LINC00408-201ENST00000447784 SELPP16109 830 aa12.88□□□□□ -0.35
LINC00408-201ENST00000447784 AMPD3Q01432 767 aa12.88□□□□□ -0.35
LINC00408-201ENST00000447784 TARBP2Q15633 366 aaKnown RBP12.88□□□□□ -0.35
LINC00408-201ENST00000447784 TRIM71Q2Q1W2 868 aaKnown RBP12.88□□□□□ -0.35
LINC00408-201ENST00000447784 MTHFD1LQ6UB35 978 aa12.88□□□□□ -0.35
LINC00408-201ENST00000447784 SV2BQ7L1I2 683 aa12.88□□□□□ -0.35
LINC00408-201ENST00000447784 SERINC5Q86VE9 423 aa12.88□□□□□ -0.35
LINC00408-201ENST00000447784 TRAPPC12Q8WVT3 735 aa12.88□□□□□ -0.35
LINC00408-201ENST00000447784 RAD54LQ92698 747 aa12.88□□□□□ -0.35
LINC00408-201ENST00000447784 MAP7D2Q96T17 732 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms