RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 KIZQ2M2Z5 673 aa20.88■□□□□ 0.93
CCDC188-202ENST00000444532 EXOC8Q8IYI6 725 aa20.88■□□□□ 0.93
CCDC188-202ENST00000444532 LRRC71Q8N4P6 559 aa20.88■□□□□ 0.93
CCDC188-202ENST00000444532 DYDC2Q96IM9 177 aa20.88■□□□□ 0.93
CCDC188-202ENST00000444532 JPH2Q9BR39 696 aaPredicted RBP20.88■□□□□ 0.93
CCDC188-202ENST00000444532 LXNQ9BS40 222 aa20.88■□□□□ 0.93
CCDC188-202ENST00000444532 ZSWIM4Q9H7M6 989 aa20.88■□□□□ 0.93
CCDC188-202ENST00000444532 NOL7Q9UMY1 257 aaKnown RBP20.88■□□□□ 0.93
CCDC188-202ENST00000444532 IGKV6-21A0A0C4DH24 114 aa20.87■□□□□ 0.93
CCDC188-202ENST00000444532 LCHNA4D1U4 455 aa20.87■□□□□ 0.93
CCDC188-202ENST00000444532 TMEM150BA6NC51 233 aa20.87■□□□□ 0.93
CCDC188-202ENST00000444532 GPR182O15218 404 aa20.87■□□□□ 0.93
CCDC188-202ENST00000444532 RPS6KA5O75582 802 aa20.87■□□□□ 0.93
CCDC188-202ENST00000444532 UPP2O95045 317 aa20.87■□□□□ 0.93
CCDC188-202ENST00000444532 GJB2P29033 226 aa20.87■□□□□ 0.93
CCDC188-202ENST00000444532 NLRP11P59045 1033 aaKnown RBP20.87■□□□□ 0.93
CCDC188-202ENST00000444532 TTC38Q5R3I4 469 aa20.87■□□□□ 0.93
CCDC188-202ENST00000444532 OTUD6AQ7L8S5 288 aa20.87■□□□□ 0.93
CCDC188-202ENST00000444532 NEK9Q8TD19 979 aa20.87■□□□□ 0.93
CCDC188-202ENST00000444532 EIF2AK1Q9BQI3 630 aaKnown RBP20.87■□□□□ 0.93
CCDC188-202ENST00000444532 TMEM60Q9H2L4 133 aa20.87■□□□□ 0.93
CCDC188-202ENST00000444532 CYP26B1Q9NR63 512 aa20.87■□□□□ 0.93
CCDC188-202ENST00000444532 RGL1Q9NZL6 768 aa20.87■□□□□ 0.93
CCDC188-202ENST00000444532 WRAP73Q9P2S5 460 aaPredicted RBP20.87■□□□□ 0.93
CCDC188-202ENST00000444532 SMC3Q9UQE7 1217 aa20.87■□□□□ 0.93
CCDC188-202ENST00000444532 NOC2LQ9Y3T9 749 aaKnown RBP20.87■□□□□ 0.93
CCDC188-202ENST00000444532 MAFO75444 373 aaPredicted RBP20.86■□□□□ 0.93
CCDC188-202ENST00000444532 SLITRK3O94933 977 aa20.86■□□□□ 0.93
CCDC188-202ENST00000444532 ZNF174Q15697 407 aa20.86■□□□□ 0.93
CCDC188-202ENST00000444532 MAFAQ8NHW3 353 aaPredicted RBP20.86■□□□□ 0.93
CCDC188-202ENST00000444532 SP7Q8TDD2 431 aaPredicted RBP20.86■□□□□ 0.93
CCDC188-202ENST00000444532 TMEM40Q8WWA1 233 aa20.86■□□□□ 0.93
CCDC188-202ENST00000444532 OSMRQ99650 979 aa20.86■□□□□ 0.93
CCDC188-202ENST00000444532 HSD17B14Q9BPX1 270 aa20.86■□□□□ 0.93
CCDC188-202ENST00000444532 TSPYL2Q9H2G4 693 aaPredicted RBP20.86■□□□□ 0.93
CCDC188-202ENST00000444532 ADAMTS10Q9H324 1103 aa20.86■□□□□ 0.93
CCDC188-202ENST00000444532 ERVK-5Q9HDB9 667 aa20.86■□□□□ 0.93
CCDC188-202ENST00000444532 MYO9BQ13459 2157 aa20.86■□□□□ 0.93
CCDC188-202ENST00000444532 TTC3P53804 2025 aa20.85■□□□□ 0.93
CCDC188-202ENST00000444532 ARHGEF15O94989 841 aa20.85■□□□□ 0.93
CCDC188-202ENST00000444532 YWHABP31946 246 aaKnown RBP20.85■□□□□ 0.93
CCDC188-202ENST00000444532 CYP4A11Q02928 519 aa20.85■□□□□ 0.93
CCDC188-202ENST00000444532 NFX1Q12986 1120 aaKnown RBP20.85■□□□□ 0.93
CCDC188-202ENST00000444532 CTTNQ14247 550 aaKnown RBP20.85■□□□□ 0.93
CCDC188-202ENST00000444532 TMEM266Q2M3C6 531 aa20.85■□□□□ 0.93
CCDC188-202ENST00000444532 PLA2G4FQ68DD2 849 aa20.85■□□□□ 0.93
CCDC188-202ENST00000444532 RTN4RL1Q86UN2 441 aaPredicted RBP20.85■□□□□ 0.93
CCDC188-202ENST00000444532 TPH2Q8IWU9 490 aa20.85■□□□□ 0.93
CCDC188-202ENST00000444532 CEP170P1Q96L14 293 aa20.85■□□□□ 0.93
CCDC188-202ENST00000444532 PPP1R16BQ96T49 567 aa20.85■□□□□ 0.93
CCDC188-202ENST00000444532 YME1L1Q96TA2 773 aa20.85■□□□□ 0.93
CCDC188-202ENST00000444532 SH2D3AQ9BRG2 576 aa20.85■□□□□ 0.93
CCDC188-202ENST00000444532 ST3GAL5Q9UNP4 418 aa20.85■□□□□ 0.93
CCDC188-202ENST00000444532 COL6A3P12111 3177 aa20.85■□□□□ 0.93
CCDC188-202ENST00000444532 CHD7Q9P2D1 2997 aa20.84■□□□□ 0.93
CCDC188-202ENST00000444532 LINC01553A4QN01 128 aa20.84■□□□□ 0.93
CCDC188-202ENST00000444532 H3BQV1 296 aa20.84■□□□□ 0.93
CCDC188-202ENST00000444532 LYPLA2O95372 231 aa20.84■□□□□ 0.93
CCDC188-202ENST00000444532 OR52Z1P0C646 297 aa20.84■□□□□ 0.93
CCDC188-202ENST00000444532 EIF4BP23588 611 aaKnown RBP20.84■□□□□ 0.93
CCDC188-202ENST00000444532 RFC5P40937 340 aa20.84■□□□□ 0.93
CCDC188-202ENST00000444532 GPC3P51654 580 aa20.84■□□□□ 0.93
CCDC188-202ENST00000444532 NPEPPSP55786 919 aa20.84■□□□□ 0.93
CCDC188-202ENST00000444532 ERVK-21P61565 698 aa20.84■□□□□ 0.93
CCDC188-202ENST00000444532 LINC01599Q8WXQ3 324 aa20.84■□□□□ 0.93
CCDC188-202ENST00000444532 SLC7A3Q8WY07 619 aa20.84■□□□□ 0.93
CCDC188-202ENST00000444532 TGS1Q96RS0 853 aaKnown RBP20.84■□□□□ 0.93
CCDC188-202ENST00000444532 TMX1Q9H3N1 280 aa20.84■□□□□ 0.93
CCDC188-202ENST00000444532 CERS4Q9HA82 394 aa20.84■□□□□ 0.93
CCDC188-202ENST00000444532 RNF216Q9NWF9 866 aaPredicted RBP20.84■□□□□ 0.93
CCDC188-202ENST00000444532 COL4A6Q14031 1691 aa20.83■□□□□ 0.93
CCDC188-202ENST00000444532 CUL4AQ13619 759 aa20.83■□□□□ 0.93
CCDC188-202ENST00000444532 MCTP1Q6DN14 999 aa20.83■□□□□ 0.93
CCDC188-202ENST00000444532 FAM228AQ86W67 206 aa20.83■□□□□ 0.93
CCDC188-202ENST00000444532 ARNTL2Q8WYA1 636 aa20.83■□□□□ 0.93
CCDC188-202ENST00000444532 DHX33Q9H6R0 707 aaKnown RBP20.83■□□□□ 0.93
CCDC188-202ENST00000444532 SUCLA2Q9P2R7 463 aaPredicted RBP20.83■□□□□ 0.93
CCDC188-202ENST00000444532 POTEMA6NI47 508 aa20.82■□□□□ 0.92
CCDC188-202ENST00000444532 GAS2O43903 313 aaKnown RBP20.82■□□□□ 0.92
CCDC188-202ENST00000444532 STAG3L1P0CL83 205 aa20.82■□□□□ 0.92
CCDC188-202ENST00000444532 POU3F3P20264 500 aaPredicted RBP20.82■□□□□ 0.92
CCDC188-202ENST00000444532 IGFBP4P22692 258 aa20.82■□□□□ 0.92
CCDC188-202ENST00000444532 TECP42680 631 aa20.82■□□□□ 0.92
CCDC188-202ENST00000444532 TOB1P50616 345 aaPredicted RBP20.82■□□□□ 0.92
CCDC188-202ENST00000444532 POLGP54098 1239 aaPredicted RBP20.82■□□□□ 0.92
CCDC188-202ENST00000444532 DRP2Q13474 957 aa20.82■□□□□ 0.92
CCDC188-202ENST00000444532 ADGRE1Q14246 886 aa20.82■□□□□ 0.92
CCDC188-202ENST00000444532 XKR9Q5GH70 373 aa20.82■□□□□ 0.92
CCDC188-202ENST00000444532 CRIPAKQ8N1N5 446 aa20.82■□□□□ 0.92
CCDC188-202ENST00000444532 C4orf32Q8N8J7 132 aa20.82■□□□□ 0.92
CCDC188-202ENST00000444532 ZNF579Q8NAF0 562 aaKnown RBP20.82■□□□□ 0.92
CCDC188-202ENST00000444532 NLRP7Q8WX94 980 aa20.82■□□□□ 0.92
CCDC188-202ENST00000444532 SCLT1Q96NL6 688 aa20.82■□□□□ 0.92
CCDC188-202ENST00000444532 RGS18Q9NS28 235 aa20.82■□□□□ 0.92
CCDC188-202ENST00000444532 C1orf112Q9NSG2 853 aa20.82■□□□□ 0.92
CCDC188-202ENST00000444532 ANKEF1Q9NU02 776 aa20.82■□□□□ 0.92
CCDC188-202ENST00000444532 ARID2Q68CP9 1835 aa20.82■□□□□ 0.92
CCDC188-202ENST00000444532 TRANK1O15050 2925 aa20.82■□□□□ 0.92
CCDC188-202ENST00000444532 DENND3A2RUS2 1198 aa20.81■□□□□ 0.92
CCDC188-202ENST00000444532 ZBTB39O15060 712 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms