RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 DBF4BQ8NFT6 615 aa16.8■□□□□ 0.28
CSNK1E-210ENST00000442216 PHOSPHO2Q8TCD6 241 aa16.8■□□□□ 0.28
CSNK1E-210ENST00000442216 SLC7A3Q8WY07 619 aa16.8■□□□□ 0.28
CSNK1E-210ENST00000442216 NACC1Q96RE7 527 aa16.8■□□□□ 0.28
CSNK1E-210ENST00000442216 SLC9A7Q96T83 725 aa16.8■□□□□ 0.28
CSNK1E-210ENST00000442216 IFIH1Q9BYX4 1025 aaKnown RBP16.8■□□□□ 0.28
CSNK1E-210ENST00000442216 DHX33Q9H6R0 707 aaKnown RBP16.8■□□□□ 0.28
CSNK1E-210ENST00000442216 CXXC1Q9P0U4 656 aaPredicted RBP16.8■□□□□ 0.28
CSNK1E-210ENST00000442216 ZBBXA8MT70 800 aa16.79■□□□□ 0.28
CSNK1E-210ENST00000442216 MED24O75448 989 aa16.79■□□□□ 0.28
CSNK1E-210ENST00000442216 CRYBB1P53674 252 aaPredicted RBP16.79■□□□□ 0.28
CSNK1E-210ENST00000442216 NPEPPSP55786 919 aa16.79■□□□□ 0.28
CSNK1E-210ENST00000442216 LPIN1Q14693 890 aa16.79■□□□□ 0.28
CSNK1E-210ENST00000442216 SF3A1Q15459 793 aaKnown RBP16.79■□□□□ 0.28
CSNK1E-210ENST00000442216 IL17AQ16552 155 aa16.79■□□□□ 0.28
CSNK1E-210ENST00000442216 XKR9Q5GH70 373 aa16.79■□□□□ 0.28
CSNK1E-210ENST00000442216 ODR4Q5SWX8 454 aa16.79■□□□□ 0.28
CSNK1E-210ENST00000442216 LRRC71Q8N4P6 559 aa16.79■□□□□ 0.28
CSNK1E-210ENST00000442216 KCTD17Q8N5Z5 321 aa16.79■□□□□ 0.28
CSNK1E-210ENST00000442216 SUGCTQ9HAC7 445 aa16.79■□□□□ 0.28
CSNK1E-210ENST00000442216 DBR1Q9UK59 544 aaKnown RBP16.79■□□□□ 0.28
CSNK1E-210ENST00000442216 AKT3Q9Y243 479 aa16.79■□□□□ 0.28
CSNK1E-210ENST00000442216 MORC2Q9Y6X9 1032 aaPredicted RBP16.79■□□□□ 0.28
CSNK1E-210ENST00000442216 SOX1O00570 391 aaPredicted RBP16.78■□□□□ 0.28
CSNK1E-210ENST00000442216 SLC26A4O43511 780 aa16.78■□□□□ 0.28
CSNK1E-210ENST00000442216 GPR32O75388 356 aa16.78■□□□□ 0.28
CSNK1E-210ENST00000442216 DGAT1O75907 488 aa16.78■□□□□ 0.28
CSNK1E-210ENST00000442216 GHRP10912 638 aa16.78■□□□□ 0.28
CSNK1E-210ENST00000442216 KCNJ6P48051 423 aa16.78■□□□□ 0.28
CSNK1E-210ENST00000442216 RARRES1P49788 294 aa16.78■□□□□ 0.28
CSNK1E-210ENST00000442216 POLGP54098 1239 aaPredicted RBP16.78■□□□□ 0.28
CSNK1E-210ENST00000442216 TMEM62Q0P6H9 643 aa16.78■□□□□ 0.28
CSNK1E-210ENST00000442216 MKRN4PQ13434 485 aaPredicted RBP16.78■□□□□ 0.28
CSNK1E-210ENST00000442216 KRT79Q5XKE5 535 aa16.78■□□□□ 0.28
CSNK1E-210ENST00000442216 AK8Q96MA6 479 aa16.78■□□□□ 0.28
CSNK1E-210ENST00000442216 SH2D3AQ9BRG2 576 aa16.78■□□□□ 0.28
CSNK1E-210ENST00000442216 RANBP2P49792 3224 aaKnown RBP16.77■□□□□ 0.28
CSNK1E-210ENST00000442216 ZBTB39O15060 712 aa16.77■□□□□ 0.28
CSNK1E-210ENST00000442216 VTNP04004 478 aa16.77■□□□□ 0.28
CSNK1E-210ENST00000442216 ZSCAN22P10073 491 aaPredicted RBP16.77■□□□□ 0.28
CSNK1E-210ENST00000442216 CCT6AP40227 531 aaKnown RBP16.77■□□□□ 0.28
CSNK1E-210ENST00000442216 GPC3P51654 580 aa16.77■□□□□ 0.28
CSNK1E-210ENST00000442216 NLRP11P59045 1033 aaKnown RBP16.77■□□□□ 0.28
CSNK1E-210ENST00000442216 WDR5P61964 334 aaKnown RBP16.77■□□□□ 0.28
CSNK1E-210ENST00000442216 ZNF410Q86VK4 478 aa16.77■□□□□ 0.28
CSNK1E-210ENST00000442216 ZNF579Q8NAF0 562 aaKnown RBP16.77■□□□□ 0.28
CSNK1E-210ENST00000442216 SNX29Q8TEQ0 813 aa16.77■□□□□ 0.28
CSNK1E-210ENST00000442216 TCP11Q8WWU5 503 aa16.77■□□□□ 0.28
CSNK1E-210ENST00000442216 CCDC43Q96MW1 224 aaKnown RBP16.77■□□□□ 0.28
CSNK1E-210ENST00000442216 FTHL17Q9BXU8 183 aa16.77■□□□□ 0.28
CSNK1E-210ENST00000442216 OSBPL7Q9BZF2 842 aa16.77■□□□□ 0.28
CSNK1E-210ENST00000442216 ADAMTS10Q9H324 1103 aa16.77■□□□□ 0.28
CSNK1E-210ENST00000442216 TTC3P53804 2025 aa16.77■□□□□ 0.27
CSNK1E-210ENST00000442216 VWA3AA6NCI4 1184 aa16.76■□□□□ 0.27
CSNK1E-210ENST00000442216 ASAP2O43150 1006 aa16.76■□□□□ 0.27
CSNK1E-210ENST00000442216 ATP2A2P16615 1042 aaKnown RBP16.76■□□□□ 0.27
CSNK1E-210ENST00000442216 EMC2Q15006 297 aa16.76■□□□□ 0.27
CSNK1E-210ENST00000442216 PTPAQ15257 358 aa16.76■□□□□ 0.27
CSNK1E-210ENST00000442216 KIZQ2M2Z5 673 aa16.76■□□□□ 0.27
CSNK1E-210ENST00000442216 TCTN1Q2MV58 587 aa16.76■□□□□ 0.27
CSNK1E-210ENST00000442216 HYIQ5T013 277 aa16.76■□□□□ 0.27
CSNK1E-210ENST00000442216 FAM109BQ6ICB4 259 aaPredicted RBP16.76■□□□□ 0.27
CSNK1E-210ENST00000442216 PIGOQ8TEQ8 1089 aa16.76■□□□□ 0.27
CSNK1E-210ENST00000442216 MTRQ99707 1265 aa16.76■□□□□ 0.27
CSNK1E-210ENST00000442216 AGO3Q9H9G7 860 aaKnown RBP16.76■□□□□ 0.27
CSNK1E-210ENST00000442216 ATP6V0A4Q9HBG4 840 aa16.76■□□□□ 0.27
CSNK1E-210ENST00000442216 SUCLA2Q9P2R7 463 aaPredicted RBP16.76■□□□□ 0.27
CSNK1E-210ENST00000442216 CLIC4Q9Y696 253 aa16.76■□□□□ 0.27
CSNK1E-210ENST00000442216 TMEM265A0A087WTH1 108 aa16.75■□□□□ 0.27
CSNK1E-210ENST00000442216 GPR182O15218 404 aa16.75■□□□□ 0.27
CSNK1E-210ENST00000442216 RPS6KA5O75582 802 aa16.75■□□□□ 0.27
CSNK1E-210ENST00000442216 F13A1P00488 732 aa16.75■□□□□ 0.27
CSNK1E-210ENST00000442216 EIF4BP23588 611 aaKnown RBP16.75■□□□□ 0.27
CSNK1E-210ENST00000442216 CD52P31358 61 aa16.75■□□□□ 0.27
CSNK1E-210ENST00000442216 LONP1P36776 959 aaKnown RBP16.75■□□□□ 0.27
CSNK1E-210ENST00000442216 PAK2Q13177 524 aa16.75■□□□□ 0.27
CSNK1E-210ENST00000442216 DRP2Q13474 957 aa16.75■□□□□ 0.27
CSNK1E-210ENST00000442216 RAB30Q15771 203 aa16.75■□□□□ 0.27
CSNK1E-210ENST00000442216 POTEGQ6S5H5 508 aa16.75■□□□□ 0.27
CSNK1E-210ENST00000442216 SPRYD3Q8NCJ5 442 aa16.75■□□□□ 0.27
CSNK1E-210ENST00000442216 PSPC1Q8WXF1 523 aaKnown RBP16.75■□□□□ 0.27
CSNK1E-210ENST00000442216 LRCH3Q96II8 777 aa16.75■□□□□ 0.27
CSNK1E-210ENST00000442216 ZNF396Q96N95 335 aaPredicted RBP16.75■□□□□ 0.27
CSNK1E-210ENST00000442216 OSMRQ99650 979 aa16.75■□□□□ 0.27
CSNK1E-210ENST00000442216 MMTAG2Q9BU76 263 aaKnown RBP16.75■□□□□ 0.27
CSNK1E-210ENST00000442216 INO80BQ9C086 356 aaPredicted RBP16.75■□□□□ 0.27
CSNK1E-210ENST00000442216 NT5C3AQ9H0P0 336 aa16.75■□□□□ 0.27
CSNK1E-210ENST00000442216 CDHR5Q9HBB8 845 aa16.75■□□□□ 0.27
CSNK1E-210ENST00000442216 PADI3Q9ULW8 664 aa16.75■□□□□ 0.27
CSNK1E-210ENST00000442216 GINS2Q9Y248 185 aa16.75■□□□□ 0.27
CSNK1E-210ENST00000442216 MYH11P35749 1972 aa16.75■□□□□ 0.27
CSNK1E-210ENST00000442216 AMHP03971 560 aa16.74■□□□□ 0.27
CSNK1E-210ENST00000442216 NASPP49321 788 aaPredicted RBP16.74■□□□□ 0.27
CSNK1E-210ENST00000442216 MXD4Q14582 209 aaPredicted RBP16.74■□□□□ 0.27
CSNK1E-210ENST00000442216 ECM1Q16610 540 aa16.74■□□□□ 0.27
CSNK1E-210ENST00000442216 ATL3Q6DD88 541 aa16.74■□□□□ 0.27
CSNK1E-210ENST00000442216 FAM173BQ6P4H8 233 aa16.74■□□□□ 0.27
CSNK1E-210ENST00000442216 RHPN2Q8IUC4 686 aa16.74■□□□□ 0.27
CSNK1E-210ENST00000442216 MCPH1Q8NEM0 835 aa16.74■□□□□ 0.27
CSNK1E-210ENST00000442216 TMEM40Q8WWA1 233 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms