RNA–Protein interactions for RNA: ENST00000436554.5

LINC00271-202, long intergenic non-protein coding RNA 271, humanhuman

TSL 5 BASIC

Gene LINC00271, Length 655 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-202ENST00000436554 IGKV6D-21A0A0A0MT36 114 aa13.18□□□□□ -0.3
LINC00271-202ENST00000436554 PRR23AA6NEV1 266 aa13.18□□□□□ -0.3
LINC00271-202ENST00000436554 DDX39AO00148 427 aaKnown RBP13.18□□□□□ -0.3
LINC00271-202ENST00000436554 BACH1O14867 736 aa13.18□□□□□ -0.3
LINC00271-202ENST00000436554 CCNE2O96020 404 aa13.18□□□□□ -0.3
LINC00271-202ENST00000436554 ASGR2P07307 311 aa13.18□□□□□ -0.3
LINC00271-202ENST00000436554 WEE2P0C1S8 567 aa13.18□□□□□ -0.3
LINC00271-202ENST00000436554 CHMLP26374 656 aa13.18□□□□□ -0.3
LINC00271-202ENST00000436554 SLC26A2P50443 739 aa13.18□□□□□ -0.3
LINC00271-202ENST00000436554 CRYBB1P53674 252 aaPredicted RBP13.18□□□□□ -0.3
LINC00271-202ENST00000436554 AAMPQ13685 434 aa13.18□□□□□ -0.3
LINC00271-202ENST00000436554 DSC3Q14574 896 aa13.18□□□□□ -0.3
LINC00271-202ENST00000436554 TPRNQ4KMQ1 711 aa13.18□□□□□ -0.3
LINC00271-202ENST00000436554 CEP55Q53EZ4 464 aa13.18□□□□□ -0.3
LINC00271-202ENST00000436554 ZNF484Q5JVG2 852 aa13.18□□□□□ -0.3
LINC00271-202ENST00000436554 ASTLQ6HA08 431 aaPredicted RBP13.18□□□□□ -0.3
LINC00271-202ENST00000436554 CASC1Q6TDU7 716 aa13.18□□□□□ -0.3
LINC00271-202ENST00000436554 ABHD15Q6UXT9 468 aa13.18□□□□□ -0.3
LINC00271-202ENST00000436554 HEATR3Q7Z4Q2 680 aa13.18□□□□□ -0.3
LINC00271-202ENST00000436554 FAM228AQ86W67 206 aa13.18□□□□□ -0.3
LINC00271-202ENST00000436554 RAB11FIP4Q86YS3 637 aa13.18□□□□□ -0.3
LINC00271-202ENST00000436554 TMTC2Q8N394 836 aa13.18□□□□□ -0.3
LINC00271-202ENST00000436554 CASP10Q92851 521 aa13.18□□□□□ -0.3
LINC00271-202ENST00000436554 PGBD1Q96JS3 809 aa13.18□□□□□ -0.3
LINC00271-202ENST00000436554 OSMRQ99650 979 aa13.18□□□□□ -0.3
LINC00271-202ENST00000436554 RNF19AQ9NV58 838 aa13.18□□□□□ -0.3
LINC00271-202ENST00000436554 SPG21Q9NZD8 308 aa13.18□□□□□ -0.3
LINC00271-202ENST00000436554 LIMD1Q9UGP4 676 aa13.18□□□□□ -0.3
LINC00271-202ENST00000436554 HCFC2Q9Y5Z7 792 aa13.18□□□□□ -0.3
LINC00271-202ENST00000436554 MYO10Q9HD67 2058 aa13.17□□□□□ -0.3
LINC00271-202ENST00000436554 RIF1Q5UIP0 2472 aaKnown RBP13.17□□□□□ -0.3
LINC00271-202ENST00000436554 CCDC69A6NI79 296 aa13.17□□□□□ -0.3
LINC00271-202ENST00000436554 ZBTB42B2RXF5 422 aa13.17□□□□□ -0.3
LINC00271-202ENST00000436554 MEIS1O00470 390 aa13.17□□□□□ -0.3
LINC00271-202ENST00000436554 PRC1O43663 620 aa13.17□□□□□ -0.3
LINC00271-202ENST00000436554 GPR32O75388 356 aa13.17□□□□□ -0.3
LINC00271-202ENST00000436554 VTNP04004 478 aa13.17□□□□□ -0.3
LINC00271-202ENST00000436554 GSPT1P15170 499 aaKnown RBP13.17□□□□□ -0.3
LINC00271-202ENST00000436554 ATP4AP20648 1035 aa13.17□□□□□ -0.3
LINC00271-202ENST00000436554 ITIH3Q06033 890 aa13.17□□□□□ -0.3
LINC00271-202ENST00000436554 FAM160B1Q5W0V3 765 aa13.17□□□□□ -0.3
LINC00271-202ENST00000436554 SWSAP1Q6NVH7 229 aa13.17□□□□□ -0.3
LINC00271-202ENST00000436554 KANK3Q6NY19 840 aa13.17□□□□□ -0.3
LINC00271-202ENST00000436554 PDXDC2PQ6P474 469 aa13.17□□□□□ -0.3
LINC00271-202ENST00000436554 TRMT1LQ7Z2T5 733 aaKnown RBP13.17□□□□□ -0.3
LINC00271-202ENST00000436554 FRMD5Q7Z6J6 570 aa13.17□□□□□ -0.3
LINC00271-202ENST00000436554 C12orf76Q8N812 135 aaPredicted RBP13.17□□□□□ -0.3
LINC00271-202ENST00000436554 MAP4K1Q92918 833 aa13.17□□□□□ -0.3
LINC00271-202ENST00000436554 ZNF558Q96NG5 402 aa13.17□□□□□ -0.3
LINC00271-202ENST00000436554 NECTIN4Q96NY8 510 aa13.17□□□□□ -0.3
LINC00271-202ENST00000436554 VPS13AQ96RL7 3174 aa13.16□□□□□ -0.3
LINC00271-202ENST00000436554 C2orf71A6NGG8 1288 aa13.16□□□□□ -0.3
LINC00271-202ENST00000436554 CLASP2O75122 1294 aaKnown RBP13.16□□□□□ -0.3
LINC00271-202ENST00000436554 CXCL14O95715 111 aa13.16□□□□□ -0.3
LINC00271-202ENST00000436554 KCNA4P22459 653 aa13.16□□□□□ -0.3
LINC00271-202ENST00000436554 COL9A3Q14050 684 aaPredicted RBP13.16□□□□□ -0.3
LINC00271-202ENST00000436554 SMC1AQ14683 1233 aaKnown RBP13.16□□□□□ -0.3
LINC00271-202ENST00000436554 TTC22Q5TAA0 569 aa13.16□□□□□ -0.3
LINC00271-202ENST00000436554 CCDC60Q8IWA6 550 aaPredicted RBP13.16□□□□□ -0.3
LINC00271-202ENST00000436554 ABI1Q8IZP0 508 aa13.16□□□□□ -0.3
LINC00271-202ENST00000436554 METTL13Q8N6R0 699 aa13.16□□□□□ -0.3
LINC00271-202ENST00000436554 FANCBQ8NB91 859 aa13.16□□□□□ -0.3
LINC00271-202ENST00000436554 NKD2Q969F2 451 aaPredicted RBP13.16□□□□□ -0.3
LINC00271-202ENST00000436554 MTA3Q9BTC8 594 aa13.16□□□□□ -0.3
LINC00271-202ENST00000436554 MFSD1Q9H3U5 465 aa13.16□□□□□ -0.3
LINC00271-202ENST00000436554 ZNF302Q9NR11 478 aa13.16□□□□□ -0.3
LINC00271-202ENST00000436554 SPTBN4Q9H254 2564 aa13.16□□□□□ -0.3
LINC00271-202ENST00000436554 LOXHD1Q8IVV2 1947 aa13.15□□□□□ -0.3
LINC00271-202ENST00000436554 FNDC1Q4ZHG4 1894 aaPredicted RBP13.15□□□□□ -0.3
LINC00271-202ENST00000436554 SH2B2O14492 632 aaPredicted RBP13.15□□□□□ -0.3
LINC00271-202ENST00000436554 HOXA2O43364 376 aa13.15□□□□□ -0.3
LINC00271-202ENST00000436554 C22orf31O95567 290 aa13.15□□□□□ -0.3
LINC00271-202ENST00000436554 CALM1P0DP23 149 aa13.15□□□□□ -0.3
LINC00271-202ENST00000436554 CALM2P0DP24 149 aa13.15□□□□□ -0.3
LINC00271-202ENST00000436554 CALM3P0DP25 149 aa13.15□□□□□ -0.3
LINC00271-202ENST00000436554 ZSCAN20P17040 1043 aaPredicted RBP13.15□□□□□ -0.3
LINC00271-202ENST00000436554 MCM5P33992 734 aa13.15□□□□□ -0.3
LINC00271-202ENST00000436554 PPM1AP35813 382 aa13.15□□□□□ -0.3
LINC00271-202ENST00000436554 ZNF76P36508 570 aa13.15□□□□□ -0.3
LINC00271-202ENST00000436554 MTHFRP42898 656 aa13.15□□□□□ -0.3
LINC00271-202ENST00000436554 CLCN5P51795 746 aa13.15□□□□□ -0.3
LINC00271-202ENST00000436554 ATAT1Q5SQI0 421 aa13.15□□□□□ -0.3
LINC00271-202ENST00000436554 RARS2Q5T160 578 aaKnown RBP13.15□□□□□ -0.3
LINC00271-202ENST00000436554 TYW1BQ6NUM6 668 aa13.15□□□□□ -0.3
LINC00271-202ENST00000436554 ECHDC2Q86YB7 292 aa13.15□□□□□ -0.3
LINC00271-202ENST00000436554 CKAP2LQ8IYA6 745 aa13.15□□□□□ -0.3
LINC00271-202ENST00000436554 ADSSL1Q8N142 457 aa13.15□□□□□ -0.3
LINC00271-202ENST00000436554 RNF169Q8NCN4 708 aa13.15□□□□□ -0.3
LINC00271-202ENST00000436554 TMEM87BQ96K49 555 aa13.15□□□□□ -0.3
LINC00271-202ENST00000436554 RIC8AQ9NPQ8 531 aa13.15□□□□□ -0.3
LINC00271-202ENST00000436554 RBM8AQ9Y5S9 174 aaKnown RBP13.15□□□□□ -0.3
LINC00271-202ENST00000436554 SLC12A7Q9Y666 1083 aa13.15□□□□□ -0.3
LINC00271-202ENST00000436554 PLXNA3P51805 1871 aa13.14□□□□□ -0.31
LINC00271-202ENST00000436554 NT5C1B-RDH14C9J2C7 533 aa13.14□□□□□ -0.31
LINC00271-202ENST00000436554 DHX15O43143 795 aaKnown RBP13.14□□□□□ -0.31
LINC00271-202ENST00000436554 SGSM2O43147 1006 aa13.14□□□□□ -0.31
LINC00271-202ENST00000436554 FOSP01100 380 aaPredicted RBP13.14□□□□□ -0.31
LINC00271-202ENST00000436554 CA8P35219 290 aa13.14□□□□□ -0.31
LINC00271-202ENST00000436554 LIFRP42702 1097 aa13.14□□□□□ -0.31
LINC00271-202ENST00000436554 NLRP11P59045 1033 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms