RNA–Protein interactions for RNA: ENST00000435201.5

LIMK1-203, Transcript of LIM domain kinase 1, humanhuman

TSL 1 (best)

Gene LIMK1, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-203ENST00000435201 ITGB3BPQ13352 177 aaPredicted RBP18.3■□□□□ 0.52
LIMK1-203ENST00000435201 MYBPC2Q14324 1141 aa18.3■□□□□ 0.52
LIMK1-203ENST00000435201 ZNF572Q7Z3I7 529 aaPredicted RBP18.3■□□□□ 0.52
LIMK1-203ENST00000435201 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.3■□□□□ 0.52
LIMK1-203ENST00000435201 STRA6Q9BX79 667 aa18.3■□□□□ 0.52
LIMK1-203ENST00000435201 AGPAT3Q9NRZ7 376 aa18.3■□□□□ 0.52
LIMK1-203ENST00000435201 HOMER2Q9NSB8 354 aa18.3■□□□□ 0.52
LIMK1-203ENST00000435201 DMAC2Q9NW81 257 aa18.3■□□□□ 0.52
LIMK1-203ENST00000435201 PKD2L1Q9P0L9 805 aa18.3■□□□□ 0.52
LIMK1-203ENST00000435201 CNOT7Q9UIV1 285 aaKnown RBP18.3■□□□□ 0.52
LIMK1-203ENST00000435201 FRMD4BQ9Y2L6 1034 aa18.3■□□□□ 0.52
LIMK1-203ENST00000435201 MYH10P35580 1976 aa18.29■□□□□ 0.52
LIMK1-203ENST00000435201 MAP2K7O14733 419 aa18.29■□□□□ 0.52
LIMK1-203ENST00000435201 PPP1R37O75864 691 aa18.29■□□□□ 0.52
LIMK1-203ENST00000435201 QARSP47897 775 aaKnown RBP18.29■□□□□ 0.52
LIMK1-203ENST00000435201 FAM193AP78312 1265 aa18.29■□□□□ 0.52
LIMK1-203ENST00000435201 ARID5AQ03989 594 aa18.29■□□□□ 0.52
LIMK1-203ENST00000435201 DMTNQ08495 405 aa18.29■□□□□ 0.52
LIMK1-203ENST00000435201 MAPK7Q13164 816 aa18.29■□□□□ 0.52
LIMK1-203ENST00000435201 PGM5Q15124 567 aa18.29■□□□□ 0.52
LIMK1-203ENST00000435201 PPP2R5AQ15172 486 aa18.29■□□□□ 0.52
LIMK1-203ENST00000435201 NAB2Q15742 525 aa18.29■□□□□ 0.52
LIMK1-203ENST00000435201 TBC1D10BQ4KMP7 808 aaPredicted RBP18.29■□□□□ 0.52
LIMK1-203ENST00000435201 HDXQ7Z353 690 aa18.29■□□□□ 0.52
LIMK1-203ENST00000435201 SAMD7Q7Z3H4 446 aa18.29■□□□□ 0.52
LIMK1-203ENST00000435201 IRF2BP2Q7Z5L9 587 aa18.29■□□□□ 0.52
LIMK1-203ENST00000435201 SLC9A9Q8IVB4 645 aa18.29■□□□□ 0.52
LIMK1-203ENST00000435201 SCYL3Q8IZE3 742 aa18.29■□□□□ 0.52
LIMK1-203ENST00000435201 MSL3Q8N5Y2 521 aaKnown RBP18.29■□□□□ 0.52
LIMK1-203ENST00000435201 UBXN6Q9BZV1 441 aa18.29■□□□□ 0.52
LIMK1-203ENST00000435201 LARSQ9P2J5 1176 aaKnown RBP18.29■□□□□ 0.52
LIMK1-203ENST00000435201 ZHX2Q9Y6X8 837 aa18.29■□□□□ 0.52
LIMK1-203ENST00000435201 ATP8B3O60423 1300 aa18.29■□□□□ 0.52
LIMK1-203ENST00000435201 A0A087X0T9 212 aa18.29■□□□□ 0.52
LIMK1-203ENST00000435201 FAM228BP0C875 321 aa18.29■□□□□ 0.52
LIMK1-203ENST00000435201 DGKZQ13574 1117 aa18.29■□□□□ 0.52
LIMK1-203ENST00000435201 UTP14CQ5TAP6 766 aaKnown RBP18.29■□□□□ 0.52
LIMK1-203ENST00000435201 CCDC70Q6NSX1 233 aa18.29■□□□□ 0.52
LIMK1-203ENST00000435201 XRRA1Q6P2D8 792 aa18.29■□□□□ 0.52
LIMK1-203ENST00000435201 RNF207Q6ZRF8 634 aa18.29■□□□□ 0.52
LIMK1-203ENST00000435201 CREG2Q8IUH2 290 aa18.29■□□□□ 0.52
LIMK1-203ENST00000435201 DAW1Q8N136 415 aa18.29■□□□□ 0.52
LIMK1-203ENST00000435201 DRC1Q96MC2 740 aa18.29■□□□□ 0.52
LIMK1-203ENST00000435201 TRERF1Q96PN7 1200 aa18.29■□□□□ 0.52
LIMK1-203ENST00000435201 TAAR1Q96RJ0 339 aa18.29■□□□□ 0.52
LIMK1-203ENST00000435201 OSBPL9Q96SU4 736 aa18.29■□□□□ 0.52
LIMK1-203ENST00000435201 TIPINQ9BVW5 301 aa18.29■□□□□ 0.52
LIMK1-203ENST00000435201 ABCB6Q9NP58 842 aa18.29■□□□□ 0.52
LIMK1-203ENST00000435201 SIX2Q9NPC8 291 aa18.29■□□□□ 0.52
LIMK1-203ENST00000435201 SALL4Q9UJQ4 1053 aa18.29■□□□□ 0.52
LIMK1-203ENST00000435201 DAAM1Q9Y4D1 1078 aa18.29■□□□□ 0.52
LIMK1-203ENST00000435201 SAMM50Q9Y512 469 aa18.29■□□□□ 0.52
LIMK1-203ENST00000435201 BTNL10A8MVZ5 291 aa18.28■□□□□ 0.52
LIMK1-203ENST00000435201 FZD9O00144 591 aa18.28■□□□□ 0.52
LIMK1-203ENST00000435201 ZNF185O15231 689 aa18.28■□□□□ 0.52
LIMK1-203ENST00000435201 EIF2AK2P19525 551 aaKnown RBP18.28■□□□□ 0.52
LIMK1-203ENST00000435201 JAK3P52333 1124 aa18.28■□□□□ 0.52
LIMK1-203ENST00000435201 NAP1L1P55209 391 aaKnown RBP18.28■□□□□ 0.52
LIMK1-203ENST00000435201 BACE1P56817 501 aa18.28■□□□□ 0.52
LIMK1-203ENST00000435201 JAM2P57087 298 aa18.28■□□□□ 0.52
LIMK1-203ENST00000435201 NBPF12Q5TAG4 269 aaPredicted RBP18.28■□□□□ 0.52
LIMK1-203ENST00000435201 SYCP3Q8IZU3 236 aa18.28■□□□□ 0.52
LIMK1-203ENST00000435201 ANKRD13CQ8N6S4 541 aa18.28■□□□□ 0.52
LIMK1-203ENST00000435201 TMEM206Q9H813 350 aa18.28■□□□□ 0.52
LIMK1-203ENST00000435201 PXMP2Q9NR77 195 aa18.28■□□□□ 0.52
LIMK1-203ENST00000435201 ADAMTS1Q9UHI8 967 aa18.28■□□□□ 0.52
LIMK1-203ENST00000435201 ZNF112Q9UJU3 913 aa18.28■□□□□ 0.52
LIMK1-203ENST00000435201 GJA3Q9Y6H8 435 aa18.28■□□□□ 0.52
LIMK1-203ENST00000435201 K7ENM7 598 aa18.27■□□□□ 0.52
LIMK1-203ENST00000435201 VWA5AO00534 786 aa18.27■□□□□ 0.52
LIMK1-203ENST00000435201 RARRES1P49788 294 aa18.27■□□□□ 0.52
LIMK1-203ENST00000435201 PTK2Q05397 1052 aa18.27■□□□□ 0.52
LIMK1-203ENST00000435201 SPP2Q13103 211 aa18.27■□□□□ 0.52
LIMK1-203ENST00000435201 COG2Q14746 738 aa18.27■□□□□ 0.52
LIMK1-203ENST00000435201 VPS36Q86VN1 386 aa18.27■□□□□ 0.52
LIMK1-203ENST00000435201 TMEM174Q8WUU8 243 aa18.27■□□□□ 0.52
LIMK1-203ENST00000435201 CCDC43Q96MW1 224 aaKnown RBP18.27■□□□□ 0.52
LIMK1-203ENST00000435201 RMDN3Q96TC7 470 aa18.27■□□□□ 0.52
LIMK1-203ENST00000435201 TCEAL9Q9UHQ7 104 aa18.27■□□□□ 0.52
LIMK1-203ENST00000435201 L1RE1Q9UN81 338 aa18.27■□□□□ 0.52
LIMK1-203ENST00000435201 BCS1LQ9Y276 419 aa18.27■□□□□ 0.52
LIMK1-203ENST00000435201 ASTN2O75129 1339 aaPredicted RBP18.27■□□□□ 0.52
LIMK1-203ENST00000435201 PHIPQ8WWQ0 1821 aa18.27■□□□□ 0.51
LIMK1-203ENST00000435201 PDE2AO00408 941 aaPredicted RBP18.26■□□□□ 0.51
LIMK1-203ENST00000435201 BUB1O43683 1085 aa18.26■□□□□ 0.51
LIMK1-203ENST00000435201 FERP16591 822 aa18.26■□□□□ 0.51
LIMK1-203ENST00000435201 SFNP31947 248 aa18.26■□□□□ 0.51
LIMK1-203ENST00000435201 FMO5P49326 533 aa18.26■□□□□ 0.51
LIMK1-203ENST00000435201 CYP2J2P51589 502 aa18.26■□□□□ 0.51
LIMK1-203ENST00000435201 OAZ1P54368 228 aa18.26■□□□□ 0.51
LIMK1-203ENST00000435201 SMC1AQ14683 1233 aaKnown RBP18.26■□□□□ 0.51
LIMK1-203ENST00000435201 KIAA0753Q2KHM9 967 aa18.26■□□□□ 0.51
LIMK1-203ENST00000435201 MAP9Q49MG5 647 aa18.26■□□□□ 0.51
LIMK1-203ENST00000435201 APOBEC3FQ8IUX4 373 aaKnown RBP18.26■□□□□ 0.51
LIMK1-203ENST00000435201 FMNL3Q8IVF7 1028 aa18.26■□□□□ 0.51
LIMK1-203ENST00000435201 KSR1Q8IVT5 923 aa18.26■□□□□ 0.51
LIMK1-203ENST00000435201 ZNF280CQ8ND82 737 aa18.26■□□□□ 0.51
LIMK1-203ENST00000435201 PDCD2LQ9BRP1 358 aa18.26■□□□□ 0.51
LIMK1-203ENST00000435201 PICK1Q9NRD5 415 aa18.26■□□□□ 0.51
LIMK1-203ENST00000435201 PCDHGC5Q9Y5F6 944 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms