RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 BACH1O14867 736 aa16.99■□□□□ 0.31
SCARF1-203ENST00000434376 ENTPD3O75355 529 aa16.99■□□□□ 0.31
SCARF1-203ENST00000434376 NOVP48745 357 aa16.99■□□□□ 0.31
SCARF1-203ENST00000434376 PPM1EQ8WY54 764 aa16.99■□□□□ 0.31
SCARF1-203ENST00000434376 PSD3Q9NYI0 1048 aa16.99■□□□□ 0.31
SCARF1-203ENST00000434376 MRPL11Q9Y3B7 192 aaKnown RBP16.99■□□□□ 0.31
SCARF1-203ENST00000434376 MEA1Q16626 185 aa16.99■□□□□ 0.31
SCARF1-203ENST00000434376 ZNF571Q7Z3V5 609 aaPredicted RBP16.99■□□□□ 0.31
SCARF1-203ENST00000434376 TRIM58Q8NG06 486 aa16.99■□□□□ 0.31
SCARF1-203ENST00000434376 KAT5Q92993 513 aa16.99■□□□□ 0.31
SCARF1-203ENST00000434376 WRNIP1Q96S55 665 aa16.99■□□□□ 0.31
SCARF1-203ENST00000434376 RMDN3Q96TC7 470 aa16.99■□□□□ 0.31
SCARF1-203ENST00000434376 CBWD1Q9BRT8 395 aa16.99■□□□□ 0.31
SCARF1-203ENST00000434376 VAV3Q9UKW4 847 aa16.99■□□□□ 0.31
SCARF1-203ENST00000434376 ZNRF3Q9ULT6 936 aa16.99■□□□□ 0.31
SCARF1-203ENST00000434376 TAF1LQ8IZX4 1826 aa16.99■□□□□ 0.31
SCARF1-203ENST00000434376 ATMINO43313 823 aaPredicted RBP16.99■□□□□ 0.31
SCARF1-203ENST00000434376 GUCY2DQ02846 1103 aa16.99■□□□□ 0.31
SCARF1-203ENST00000434376 ZNF211Q13398 564 aaPredicted RBP16.99■□□□□ 0.31
SCARF1-203ENST00000434376 PADI6Q6TGC4 694 aa16.99■□□□□ 0.31
SCARF1-203ENST00000434376 DDX42Q86XP3 938 aaKnown RBP eCLIP16.99■□□□□ 0.31
SCARF1-203ENST00000434376 CCDC170Q8IYT3 715 aa16.99■□□□□ 0.31
SCARF1-203ENST00000434376 GMCL1Q96IK5 515 aa16.99■□□□□ 0.31
SCARF1-203ENST00000434376 NHSQ6T4R5 1651 aa16.98■□□□□ 0.31
SCARF1-203ENST00000434376 BRCA2P51587 3418 aa16.98■□□□□ 0.31
SCARF1-203ENST00000434376 CALUO43852 315 aaPredicted RBP16.98■□□□□ 0.31
SCARF1-203ENST00000434376 ZEB2O60315 1214 aa16.98■□□□□ 0.31
SCARF1-203ENST00000434376 PSMD2Q13200 908 aa16.98■□□□□ 0.31
SCARF1-203ENST00000434376 R3HDM1Q15032 1099 aaKnown RBP16.98■□□□□ 0.31
SCARF1-203ENST00000434376 CBWD6Q4V339 395 aa16.98■□□□□ 0.31
SCARF1-203ENST00000434376 CBWD3Q5JTY5 395 aa16.98■□□□□ 0.31
SCARF1-203ENST00000434376 CBWD5Q5RIA9 395 aa16.98■□□□□ 0.31
SCARF1-203ENST00000434376 ALKBH5Q6P6C2 394 aaKnown RBP16.98■□□□□ 0.31
SCARF1-203ENST00000434376 RETREG2Q8NC44 543 aa16.98■□□□□ 0.31
SCARF1-203ENST00000434376 TEKT3Q9BXF9 490 aa16.98■□□□□ 0.31
SCARF1-203ENST00000434376 RREB1Q92766 1687 aa16.98■□□□□ 0.31
SCARF1-203ENST00000434376 GOLGA6CA6NDK9 693 aa16.98■□□□□ 0.31
SCARF1-203ENST00000434376 GOLGA6DP0CG33 693 aa16.98■□□□□ 0.31
SCARF1-203ENST00000434376 BAATQ14032 418 aaPredicted RBP16.98■□□□□ 0.31
SCARF1-203ENST00000434376 ARHGEF16Q5VV41 709 aa16.98■□□□□ 0.31
SCARF1-203ENST00000434376 CCDC70Q6NSX1 233 aa16.98■□□□□ 0.31
SCARF1-203ENST00000434376 SUPT20HQ8NEM7 779 aa16.98■□□□□ 0.31
SCARF1-203ENST00000434376 TAF4BQ92750 862 aa16.98■□□□□ 0.31
SCARF1-203ENST00000434376 RUFY1Q96T51 708 aa16.98■□□□□ 0.31
SCARF1-203ENST00000434376 RPAP3Q9H6T3 665 aaPredicted RBP16.98■□□□□ 0.31
SCARF1-203ENST00000434376 GOLGA6AQ9NYA3 693 aa16.98■□□□□ 0.31
SCARF1-203ENST00000434376 PON1P27169 355 aa16.98■□□□□ 0.31
SCARF1-203ENST00000434376 GMPSP49915 693 aaPredicted RBP16.98■□□□□ 0.31
SCARF1-203ENST00000434376 PRELPP51888 382 aa16.98■□□□□ 0.31
SCARF1-203ENST00000434376 ZCWPW2Q504Y3 356 aa16.98■□□□□ 0.31
SCARF1-203ENST00000434376 SEZ6Q53EL9 994 aa16.98■□□□□ 0.31
SCARF1-203ENST00000434376 C8orf74Q6P047 294 aa16.98■□□□□ 0.31
SCARF1-203ENST00000434376 MSANTD4Q8NCY6 345 aa16.98■□□□□ 0.31
SCARF1-203ENST00000434376 EHBP1Q8NDI1 1231 aa16.98■□□□□ 0.31
SCARF1-203ENST00000434376 SPATA4Q8NEY3 305 aa16.98■□□□□ 0.31
SCARF1-203ENST00000434376 RBM46Q8TBY0 533 aaKnown RBP16.98■□□□□ 0.31
SCARF1-203ENST00000434376 BICD1Q96G01 975 aa16.98■□□□□ 0.31
SCARF1-203ENST00000434376 OSGEPQ9NPF4 335 aa16.98■□□□□ 0.31
SCARF1-203ENST00000434376 FRMD4BQ9Y2L6 1034 aa16.98■□□□□ 0.31
SCARF1-203ENST00000434376 ASNSP08243 561 aa16.97■□□□□ 0.31
SCARF1-203ENST00000434376 MTMR1Q13613 665 aa16.97■□□□□ 0.31
SCARF1-203ENST00000434376 MAP9Q49MG5 647 aa16.97■□□□□ 0.31
SCARF1-203ENST00000434376 HGSNATQ68CP4 663 aa16.97■□□□□ 0.31
SCARF1-203ENST00000434376 DAAM2Q86T65 1068 aa16.97■□□□□ 0.31
SCARF1-203ENST00000434376 PPM1KQ8N3J5 372 aa16.97■□□□□ 0.31
SCARF1-203ENST00000434376 UHMK1Q8TAS1 419 aaKnown RBP16.97■□□□□ 0.31
SCARF1-203ENST00000434376 FAM76AQ8TAV0 307 aa16.97■□□□□ 0.31
SCARF1-203ENST00000434376 FAM212AQ96EL1 285 aa16.97■□□□□ 0.31
SCARF1-203ENST00000434376 FAM20AQ96MK3 541 aa16.97■□□□□ 0.31
SCARF1-203ENST00000434376 DEFB129Q9H1M3 183 aa16.97■□□□□ 0.31
SCARF1-203ENST00000434376 TAOK3Q9H2K8 898 aa16.97■□□□□ 0.31
SCARF1-203ENST00000434376 HERC5Q9UII4 1024 aaKnown RBP16.97■□□□□ 0.31
SCARF1-203ENST00000434376 SNX12Q9UMY4 172 aa16.97■□□□□ 0.31
SCARF1-203ENST00000434376 LAMB1P07942 1786 aa16.97■□□□□ 0.31
SCARF1-203ENST00000434376 IGLV3-22A0A075B6J6 115 aa16.97■□□□□ 0.31
SCARF1-203ENST00000434376 PPP1R12BO60237 982 aaPredicted RBP16.97■□□□□ 0.31
SCARF1-203ENST00000434376 MAP2K1Q02750 393 aaPredicted RBP16.97■□□□□ 0.31
SCARF1-203ENST00000434376 UGCGQ16739 394 aa16.97■□□□□ 0.31
SCARF1-203ENST00000434376 BCAS4Q8TDM0 211 aa16.97■□□□□ 0.31
SCARF1-203ENST00000434376 HNRNPLLQ8WVV9 542 aaKnown RBP16.97■□□□□ 0.31
SCARF1-203ENST00000434376 PPP1R16BQ96T49 567 aa16.97■□□□□ 0.31
SCARF1-203ENST00000434376 EPB41L5Q9HCM4 733 aa16.97■□□□□ 0.31
SCARF1-203ENST00000434376 CEP72Q9P209 647 aa16.97■□□□□ 0.31
SCARF1-203ENST00000434376 BCCIPQ9P287 314 aaKnown RBP eCLIP16.97■□□□□ 0.31
SCARF1-203ENST00000434376 RAB21Q9UL25 225 aa16.97■□□□□ 0.31
SCARF1-203ENST00000434376 NFU1Q9UMS0 254 aa16.97■□□□□ 0.31
SCARF1-203ENST00000434376 PCDHA2Q9Y5H9 948 aa16.97■□□□□ 0.31
SCARF1-203ENST00000434376 PLIN4Q96Q06 1357 aa16.97■□□□□ 0.31
SCARF1-203ENST00000434376 ASTN1O14525 1302 aa16.97■□□□□ 0.31
SCARF1-203ENST00000434376 UBR3Q6ZT12 1888 aa16.96■□□□□ 0.31
SCARF1-203ENST00000434376 TGFB1I1O43294 461 aa16.96■□□□□ 0.31
SCARF1-203ENST00000434376 EYA4O95677 639 aa16.96■□□□□ 0.31
SCARF1-203ENST00000434376 GJC1P36383 396 aa16.96■□□□□ 0.31
SCARF1-203ENST00000434376 PPP1R2P41236 205 aa16.96■□□□□ 0.31
SCARF1-203ENST00000434376 ATP1A2P50993 1020 aa16.96■□□□□ 0.31
SCARF1-203ENST00000434376 GBP6Q6ZN66 633 aa16.96■□□□□ 0.31
SCARF1-203ENST00000434376 PALB2Q86YC2 1186 aa16.96■□□□□ 0.31
SCARF1-203ENST00000434376 TOPORSQ9NS56 1045 aaPredicted RBP16.96■□□□□ 0.31
SCARF1-203ENST00000434376 RPL13P26373 211 aaKnown RBP16.96■□□□□ 0.31
SCARF1-203ENST00000434376 USP14P54578 494 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms