RNA–Protein interactions for RNA: ENST00000431413.5

HERC3-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 5

Gene HERC3, Length 761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-206ENST00000431413 CYP3A7-CYP3A51PA0A087WV96 503 aa17.09■□□□□ 0.33
HERC3-206ENST00000431413 MMP1P03956 469 aa17.09■□□□□ 0.33
HERC3-206ENST00000431413 CYP3A7P24462 503 aa17.09■□□□□ 0.33
HERC3-206ENST00000431413 PRKCEQ02156 737 aa17.09■□□□□ 0.33
HERC3-206ENST00000431413 TBC1D8BQ0IIM8 1120 aa17.09■□□□□ 0.33
HERC3-206ENST00000431413 ANKRD1Q15327 319 aa17.09■□□□□ 0.33
HERC3-206ENST00000431413 PAN2Q504Q3 1202 aaKnown RBP17.09■□□□□ 0.33
HERC3-206ENST00000431413 ERICH6BQ5W0A0 696 aa17.09■□□□□ 0.33
HERC3-206ENST00000431413 PTCRAQ6ISU1 281 aaPredicted RBP17.09■□□□□ 0.33
HERC3-206ENST00000431413 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.09■□□□□ 0.33
HERC3-206ENST00000431413 NEK9Q8TD19 979 aa17.09■□□□□ 0.33
HERC3-206ENST00000431413 TMEM40Q8WWA1 233 aa17.09■□□□□ 0.33
HERC3-206ENST00000431413 PPP1R16BQ96T49 567 aa17.09■□□□□ 0.33
HERC3-206ENST00000431413 UNC45AQ9H3U1 944 aa17.09■□□□□ 0.33
HERC3-206ENST00000431413 ALG13Q9NP73 1137 aaKnown RBP17.09■□□□□ 0.33
HERC3-206ENST00000431413 AAASQ9NRG9 546 aa17.09■□□□□ 0.33
HERC3-206ENST00000431413 CLDND1Q9NY35 253 aa17.09■□□□□ 0.33
HERC3-206ENST00000431413 PLAGL2Q9UPG8 496 aa17.09■□□□□ 0.33
HERC3-206ENST00000431413 MUC3AQ02505 3323 aa17.08■□□□□ 0.33
HERC3-206ENST00000431413 BRWD1Q9NSI6 2320 aa17.08■□□□□ 0.33
HERC3-206ENST00000431413 CCDC194A0A1B0GVG4 234 aa17.08■□□□□ 0.32
HERC3-206ENST00000431413 GPR32O75388 356 aa17.08■□□□□ 0.32
HERC3-206ENST00000431413 PSMD10O75832 226 aa17.08■□□□□ 0.32
HERC3-206ENST00000431413 ZSCAN20P17040 1043 aaPredicted RBP17.08■□□□□ 0.32
HERC3-206ENST00000431413 CLCN3P51790 818 aa17.08■□□□□ 0.32
HERC3-206ENST00000431413 NLRP11P59045 1033 aaKnown RBP17.08■□□□□ 0.32
HERC3-206ENST00000431413 ANAPC15P60006 121 aa17.08■□□□□ 0.32
HERC3-206ENST00000431413 CDC42EP1Q00587 391 aa17.08■□□□□ 0.32
HERC3-206ENST00000431413 SPOUT1Q5T280 376 aaKnown RBP17.08■□□□□ 0.32
HERC3-206ENST00000431413 SCLT1Q96NL6 688 aa17.08■□□□□ 0.32
HERC3-206ENST00000431413 ATP6V0A4Q9HBG4 840 aa17.08■□□□□ 0.32
HERC3-206ENST00000431413 PCDHB12Q9Y5F1 795 aa17.08■□□□□ 0.32
HERC3-206ENST00000431413 NLRC5Q86WI3 1866 aa17.07■□□□□ 0.32
HERC3-206ENST00000431413 C9IYK1 514 aa17.07■□□□□ 0.32
HERC3-206ENST00000431413 H3BQ06 376 aaPredicted RBP17.07■□□□□ 0.32
HERC3-206ENST00000431413 M0R2N6 131 aa17.07■□□□□ 0.32
HERC3-206ENST00000431413 EDIL3O43854 480 aa17.07■□□□□ 0.32
HERC3-206ENST00000431413 ZNF862O60290 1169 aa17.07■□□□□ 0.32
HERC3-206ENST00000431413 MGEA5O60502 916 aa17.07■□□□□ 0.32
HERC3-206ENST00000431413 TDP2O95551 362 aa17.07■□□□□ 0.32
HERC3-206ENST00000431413 EIF4BP23588 611 aaKnown RBP17.07■□□□□ 0.32
HERC3-206ENST00000431413 COL19A1Q14993 1142 aa17.07■□□□□ 0.32
HERC3-206ENST00000431413 XKR3Q5GH77 459 aa17.07■□□□□ 0.32
HERC3-206ENST00000431413 FAM228AQ86W67 206 aa17.07■□□□□ 0.32
HERC3-206ENST00000431413 FAM178BQ8IXR5 827 aa17.07■□□□□ 0.32
HERC3-206ENST00000431413 WASF1Q92558 559 aa17.07■□□□□ 0.32
HERC3-206ENST00000431413 NAP1L4Q99733 375 aaKnown RBP17.07■□□□□ 0.32
HERC3-206ENST00000431413 ELAC1Q9H777 363 aaKnown RBP17.07■□□□□ 0.32
HERC3-206ENST00000431413 TMEM161AQ9NX61 479 aa17.07■□□□□ 0.32
HERC3-206ENST00000431413 DDX25Q9UHL0 483 aaKnown RBP17.07■□□□□ 0.32
HERC3-206ENST00000431413 MYH9P35579 1960 aaKnown RBP17.06■□□□□ 0.32
HERC3-206ENST00000431413 STK36Q9NRP7 1315 aa17.06■□□□□ 0.32
HERC3-206ENST00000431413 GRXCR2A6NFK2 248 aa17.06■□□□□ 0.32
HERC3-206ENST00000431413 TBKBP1A7MCY6 615 aa17.06■□□□□ 0.32
HERC3-206ENST00000431413 HOXA2O43364 376 aa17.06■□□□□ 0.32
HERC3-206ENST00000431413 ITGB1P05556 798 aa17.06■□□□□ 0.32
HERC3-206ENST00000431413 COL9A1P20849 921 aa17.06■□□□□ 0.32
HERC3-206ENST00000431413 SSTR3P32745 418 aaPredicted RBP17.06■□□□□ 0.32
HERC3-206ENST00000431413 DNM2P50570 870 aa17.06■□□□□ 0.32
HERC3-206ENST00000431413 SCRN1Q12765 414 aa17.06■□□□□ 0.32
HERC3-206ENST00000431413 CSPP1Q1MSJ5 1256 aa17.06■□□□□ 0.32
HERC3-206ENST00000431413 INF2Q27J81 1249 aa17.06■□□□□ 0.32
HERC3-206ENST00000431413 LETM2Q2VYF4 491 aa17.06■□□□□ 0.32
HERC3-206ENST00000431413 GJD3Q8N144 294 aa17.06■□□□□ 0.32
HERC3-206ENST00000431413 LRRC71Q8N4P6 559 aa17.06■□□□□ 0.32
HERC3-206ENST00000431413 KLHL23Q8NBE8 558 aa17.06■□□□□ 0.32
HERC3-206ENST00000431413 MBOAT7Q96N66 472 aa17.06■□□□□ 0.32
HERC3-206ENST00000431413 AIFM3Q96NN9 605 aa17.06■□□□□ 0.32
HERC3-206ENST00000431413 SEPT9Q9UHD8 586 aaPredicted RBP17.06■□□□□ 0.32
HERC3-206ENST00000431413 PFKFB2O60825 505 aa17.05■□□□□ 0.32
HERC3-206ENST00000431413 DKC1O60832 514 aaKnown RBP eCLIP17.05■□□□□ 0.32
HERC3-206ENST00000431413 IL9P15248 144 aa17.05■□□□□ 0.32
HERC3-206ENST00000431413 GCFC2P16383 781 aaKnown RBP17.05■□□□□ 0.32
HERC3-206ENST00000431413 FAM189BP81408 668 aa17.05■□□□□ 0.32
HERC3-206ENST00000431413 NPY5RQ15761 445 aa17.05■□□□□ 0.32
HERC3-206ENST00000431413 UGCGQ16739 394 aa17.05■□□□□ 0.32
HERC3-206ENST00000431413 NEK8Q86SG6 692 aa17.05■□□□□ 0.32
HERC3-206ENST00000431413 LINC01465Q8N7H1 131 aa17.05■□□□□ 0.32
HERC3-206ENST00000431413 SPPL3Q8TCT6 385 aa17.05■□□□□ 0.32
HERC3-206ENST00000431413 NLRP7Q8WX94 980 aa17.05■□□□□ 0.32
HERC3-206ENST00000431413 GJA10Q969M2 543 aa17.05■□□□□ 0.32
HERC3-206ENST00000431413 JPH2Q9BR39 696 aaPredicted RBP17.05■□□□□ 0.32
HERC3-206ENST00000431413 PHF20Q9BVI0 1012 aa17.05■□□□□ 0.32
HERC3-206ENST00000431413 NIFKQ9BYG3 293 aaKnown RBP17.05■□□□□ 0.32
HERC3-206ENST00000431413 ADAMTS10Q9H324 1103 aa17.05■□□□□ 0.32
HERC3-206ENST00000431413 IGFLR1Q9H665 355 aa17.05■□□□□ 0.32
HERC3-206ENST00000431413 KCNJ14Q9UNX9 436 aa17.05■□□□□ 0.32
HERC3-206ENST00000431413 MARCH6O60337 910 aa17.04■□□□□ 0.32
HERC3-206ENST00000431413 CSPG5O95196 566 aa17.04■□□□□ 0.32
HERC3-206ENST00000431413 GATMP50440 423 aa17.04■□□□□ 0.32
HERC3-206ENST00000431413 PSMC5P62195 406 aa17.04■□□□□ 0.32
HERC3-206ENST00000431413 UBE3AQ05086 875 aa17.04■□□□□ 0.32
HERC3-206ENST00000431413 HYAL1Q12794 435 aa17.04■□□□□ 0.32
HERC3-206ENST00000431413 DSC3Q14574 896 aa17.04■□□□□ 0.32
HERC3-206ENST00000431413 TARBP2Q15633 366 aaKnown RBP17.04■□□□□ 0.32
HERC3-206ENST00000431413 CTC1Q2NKJ3 1217 aa17.04■□□□□ 0.32
HERC3-206ENST00000431413 MTERF2Q49AM1 385 aa17.04■□□□□ 0.32
HERC3-206ENST00000431413 FAM102BQ5T8I3 360 aa17.04■□□□□ 0.32
HERC3-206ENST00000431413 PPP4R3AQ6IN85 833 aa17.04■□□□□ 0.32
HERC3-206ENST00000431413 ABI1Q8IZP0 508 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms