RNA–Protein interactions for RNA: ENST00000429746.1

CTSD-203, Transcript of cathepsin D, humanhuman

TSL 3

Gene CTSD, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-203ENST00000429746 ATP2C1P98194 919 aaPredicted RBP19.52■□□□□ 0.72
CTSD-203ENST00000429746 ECM1Q16610 540 aa19.52■□□□□ 0.72
CTSD-203ENST00000429746 EFCAB12Q6NXP0 572 aa19.52■□□□□ 0.72
CTSD-203ENST00000429746 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.52■□□□□ 0.723e-9■■□□□ 13
CTSD-203ENST00000429746 TMCO2Q7Z6W1 182 aaPredicted RBP19.52■□□□□ 0.72
CTSD-203ENST00000429746 FERMT3Q86UX7 667 aa19.52■□□□□ 0.72
CTSD-203ENST00000429746 DHX33Q9H6R0 707 aaKnown RBP19.52■□□□□ 0.72
CTSD-203ENST00000429746 ZSWIM4Q9H7M6 989 aa19.52■□□□□ 0.72
CTSD-203ENST00000429746 CYP26B1Q9NR63 512 aa19.52■□□□□ 0.72
CTSD-203ENST00000429746 SQORQ9Y6N5 450 aa19.52■□□□□ 0.72
CTSD-203ENST00000429746 TTC3P53804 2025 aa19.52■□□□□ 0.72
CTSD-203ENST00000429746 ABHD14A-ACY1A0A1B0GW23 586 aa19.51■□□□□ 0.71
CTSD-203ENST00000429746 DDX11L8A8MPP1 907 aa19.51■□□□□ 0.71
CTSD-203ENST00000429746 MARCH6O60337 910 aa19.51■□□□□ 0.71
CTSD-203ENST00000429746 ARHGEF15O94989 841 aa19.51■□□□□ 0.71
CTSD-203ENST00000429746 RPLP2P05387 115 aaKnown RBP19.51■□□□□ 0.71
CTSD-203ENST00000429746 FOSL2P15408 326 aa19.51■□□□□ 0.71
CTSD-203ENST00000429746 YWHABP31946 246 aaKnown RBP19.51■□□□□ 0.71
CTSD-203ENST00000429746 TSHZ1Q6ZSZ6 1077 aa19.51■□□□□ 0.71
CTSD-203ENST00000429746 RSPH3Q86UC2 560 aa19.51■□□□□ 0.71
CTSD-203ENST00000429746 CATSPER3Q86XQ3 398 aa19.51■□□□□ 0.71
CTSD-203ENST00000429746 MAFAQ8NHW3 353 aaPredicted RBP19.51■□□□□ 0.71
CTSD-203ENST00000429746 PHOSPHO2Q8TCD6 241 aa19.51■□□□□ 0.71
CTSD-203ENST00000429746 MYLIPQ8WY64 445 aa19.51■□□□□ 0.71
CTSD-203ENST00000429746 XPNPEP1Q9NQW7 623 aa19.51■□□□□ 0.71
CTSD-203ENST00000429746 PCDHA11Q9Y5I1 949 aa19.51■□□□□ 0.71
CTSD-203ENST00000429746 A0A087WWV3 80 aa19.5■□□□□ 0.71
CTSD-203ENST00000429746 MYOGP15173 224 aa19.5■□□□□ 0.71
CTSD-203ENST00000429746 PRPHP41219 470 aa19.5■□□□□ 0.71
CTSD-203ENST00000429746 RABGGTBP53611 331 aa19.5■□□□□ 0.71
CTSD-203ENST00000429746 GRIN2CQ14957 1233 aa19.5■□□□□ 0.71
CTSD-203ENST00000429746 IER5Q5VY09 327 aa19.5■□□□□ 0.71
CTSD-203ENST00000429746 RTN4RL1Q86UN2 441 aaPredicted RBP19.5■□□□□ 0.71
CTSD-203ENST00000429746 CRIPAKQ8N1N5 446 aa19.5■□□□□ 0.71
CTSD-203ENST00000429746 NEK9Q8TD19 979 aa19.5■□□□□ 0.71
CTSD-203ENST00000429746 MMTAG2Q9BU76 263 aaKnown RBP19.5■□□□□ 0.71
CTSD-203ENST00000429746 POLR3CQ9BUI4 534 aaPredicted RBP19.5■□□□□ 0.71
CTSD-203ENST00000429746 IFIH1Q9BYX4 1025 aaKnown RBP19.5■□□□□ 0.71
CTSD-203ENST00000429746 TMX1Q9H3N1 280 aa19.5■□□□□ 0.71
CTSD-203ENST00000429746 REV3LO60673 3130 aa19.5■□□□□ 0.71
CTSD-203ENST00000429746 VPS37CA5D8V6 355 aaPredicted RBP19.49■□□□□ 0.71
CTSD-203ENST00000429746 PP2D1A8MPX8 630 aa19.49■□□□□ 0.71
CTSD-203ENST00000429746 ZBBXA8MT70 800 aa19.49■□□□□ 0.71
CTSD-203ENST00000429746 ATP2A2P16615 1042 aaKnown RBP19.49■□□□□ 0.71
CTSD-203ENST00000429746 PDCP20941 246 aa19.49■□□□□ 0.71
CTSD-203ENST00000429746 CD52P31358 61 aa19.49■□□□□ 0.71
CTSD-203ENST00000429746 TBC1D8BQ0IIM8 1120 aa19.49■□□□□ 0.71
CTSD-203ENST00000429746 KIZQ2M2Z5 673 aa19.49■□□□□ 0.71
CTSD-203ENST00000429746 FAM173BQ6P4H8 233 aa19.49■□□□□ 0.71
CTSD-203ENST00000429746 BRAPQ7Z569 592 aa19.49■□□□□ 0.71
CTSD-203ENST00000429746 TPH2Q8IWU9 490 aa19.49■□□□□ 0.71
CTSD-203ENST00000429746 METTL13Q8N6R0 699 aa19.49■□□□□ 0.71
CTSD-203ENST00000429746 PPP1R16BQ96T49 567 aa19.49■□□□□ 0.71
CTSD-203ENST00000429746 SLC9A7Q96T83 725 aa19.49■□□□□ 0.71
CTSD-203ENST00000429746 SLC28A3Q9HAS3 691 aa19.49■□□□□ 0.71
CTSD-203ENST00000429746 NOC2LQ9Y3T9 749 aaKnown RBP19.49■□□□□ 0.71
CTSD-203ENST00000429746 LAD1O00515 517 aa19.48■□□□□ 0.71
CTSD-203ENST00000429746 RPA1P27694 616 aa19.48■□□□□ 0.71
CTSD-203ENST00000429746 GPC3P51654 580 aa19.48■□□□□ 0.71
CTSD-203ENST00000429746 IKBKEQ14164 716 aa19.48■□□□□ 0.71
CTSD-203ENST00000429746 PDIA5Q14554 519 aa19.48■□□□□ 0.71
CTSD-203ENST00000429746 FAM228AQ86W67 206 aa19.48■□□□□ 0.71
CTSD-203ENST00000429746 HERC6Q8IVU3 1022 aa19.48■□□□□ 0.71
CTSD-203ENST00000429746 HSCBQ8IWL3 235 aa19.48■□□□□ 0.71
CTSD-203ENST00000429746 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.48■□□□□ 0.71
CTSD-203ENST00000429746 SEPT8Q92599 483 aa19.48■□□□□ 0.71
CTSD-203ENST00000429746 GAS2L1Q99501 681 aaPredicted RBP19.48■□□□□ 0.71
CTSD-203ENST00000429746 OSMRQ99650 979 aa19.48■□□□□ 0.71
CTSD-203ENST00000429746 ERVK-5Q9HDB9 667 aa19.48■□□□□ 0.71
CTSD-203ENST00000429746 TUFT1Q9NNX1 390 aa19.48■□□□□ 0.71
CTSD-203ENST00000429746 PADI3Q9ULW8 664 aa19.48■□□□□ 0.71
CTSD-203ENST00000429746 DLL1O00548 723 aa19.47■□□□□ 0.71
CTSD-203ENST00000429746 MGEA5O60502 916 aa19.47■□□□□ 0.71
CTSD-203ENST00000429746 DKC1O60832 514 aaKnown RBP eCLIP19.47■□□□□ 0.711e-14■□□□□ 9.7
CTSD-203ENST00000429746 RARRES1P49788 294 aa19.47■□□□□ 0.71
CTSD-203ENST00000429746 CRYBB1P53674 252 aaPredicted RBP19.47■□□□□ 0.71
CTSD-203ENST00000429746 NLRP11P59045 1033 aaKnown RBP19.47■□□□□ 0.71
CTSD-203ENST00000429746 PTPAQ15257 358 aa19.47■□□□□ 0.71
CTSD-203ENST00000429746 TMEM266Q2M3C6 531 aa19.47■□□□□ 0.71
CTSD-203ENST00000429746 POTEGQ6S5H5 508 aa19.47■□□□□ 0.71
CTSD-203ENST00000429746 SPRED2Q7Z698 418 aa19.47■□□□□ 0.71
CTSD-203ENST00000429746 PIGOQ8TEQ8 1089 aa19.47■□□□□ 0.71
CTSD-203ENST00000429746 APBB2Q92870 758 aa19.47■□□□□ 0.71
CTSD-203ENST00000429746 ZNF668Q96K58 619 aaPredicted RBP19.47■□□□□ 0.71
CTSD-203ENST00000429746 CEP170P1Q96L14 293 aa19.47■□□□□ 0.71
CTSD-203ENST00000429746 SUGCTQ9HAC7 445 aa19.47■□□□□ 0.71
CTSD-203ENST00000429746 ANKEF1Q9NU02 776 aa19.47■□□□□ 0.71
CTSD-203ENST00000429746 PPME1Q9Y570 386 aa19.47■□□□□ 0.71
CTSD-203ENST00000429746 STX6O43752 255 aa19.46■□□□□ 0.71
CTSD-203ENST00000429746 EFCAB14O75071 495 aa19.46■□□□□ 0.71
CTSD-203ENST00000429746 GJB5O95377 273 aa19.46■□□□□ 0.71
CTSD-203ENST00000429746 CDC25AP30304 524 aa19.46■□□□□ 0.71
CTSD-203ENST00000429746 GRIN1Q05586 938 aa19.46■□□□□ 0.71
CTSD-203ENST00000429746 PKP1Q13835 747 aa19.46■□□□□ 0.71
CTSD-203ENST00000429746 USP38Q8NB14 1042 aa19.46■□□□□ 0.71
CTSD-203ENST00000429746 RC3H2Q9HBD1 1191 aaKnown RBP19.46■□□□□ 0.71
CTSD-203ENST00000429746 LCHNA4D1U4 455 aa19.45■□□□□ 0.7
CTSD-203ENST00000429746 ENPP3O14638 875 aa19.45■□□□□ 0.7
CTSD-203ENST00000429746 XRCC6P12956 609 aaKnown RBP eCLIP19.45■□□□□ 0.7
CTSD-203ENST00000429746 HTRA4P83105 476 aaPredicted RBP19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms