RNA–Protein interactions for RNA: ENST00000428546.2

KCNMA1-213, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 5

Gene KCNMA1, Length 1,012 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-213ENST00000428546 HAS1Q92839 578 aa12.92□□□□□ -0.34
KCNMA1-213ENST00000428546 TBC1D32Q96NH3 1257 aa12.92□□□□□ -0.34
KCNMA1-213ENST00000428546 LXNQ9BS40 222 aa12.92□□□□□ -0.34
KCNMA1-213ENST00000428546 NOL7Q9UMY1 257 aaKnown RBP12.92□□□□□ -0.34
KCNMA1-213ENST00000428546 PCDHA12Q9UN75 941 aa12.92□□□□□ -0.34
KCNMA1-213ENST00000428546 CDH23Q9H251 3354 aa12.91□□□□□ -0.34
KCNMA1-213ENST00000428546 KIAA1671Q9BY89 1806 aa12.91□□□□□ -0.34
KCNMA1-213ENST00000428546 H3BQV1 296 aa12.91□□□□□ -0.34
KCNMA1-213ENST00000428546 P4HBP07237 508 aaKnown RBP12.91□□□□□ -0.34
KCNMA1-213ENST00000428546 POLGP54098 1239 aaPredicted RBP12.91□□□□□ -0.34
KCNMA1-213ENST00000428546 ZNF174Q15697 407 aa12.91□□□□□ -0.34
KCNMA1-213ENST00000428546 SPRED2Q7Z698 418 aa12.91□□□□□ -0.34
KCNMA1-213ENST00000428546 FBXO18Q8NFZ0 1043 aa12.91□□□□□ -0.34
KCNMA1-213ENST00000428546 GDPD5Q8WTR4 605 aa12.91□□□□□ -0.34
KCNMA1-213ENST00000428546 DYDC2Q96IM9 177 aa12.91□□□□□ -0.34
KCNMA1-213ENST00000428546 TMX3Q96JJ7 454 aa12.91□□□□□ -0.34
KCNMA1-213ENST00000428546 CEP170P1Q96L14 293 aa12.91□□□□□ -0.34
KCNMA1-213ENST00000428546 TGS1Q96RS0 853 aaKnown RBP12.91□□□□□ -0.34
KCNMA1-213ENST00000428546 FTHL17Q9BXU8 183 aa12.91□□□□□ -0.34
KCNMA1-213ENST00000428546 TTC12Q9H892 705 aaPredicted RBP12.91□□□□□ -0.34
KCNMA1-213ENST00000428546 CDHR5Q9HBB8 845 aa12.91□□□□□ -0.34
KCNMA1-213ENST00000428546 RGL1Q9NZL6 768 aa12.91□□□□□ -0.34
KCNMA1-213ENST00000428546 NOC2LQ9Y3T9 749 aaKnown RBP12.91□□□□□ -0.34
KCNMA1-213ENST00000428546 TTC3P53804 2025 aa12.91□□□□□ -0.34
KCNMA1-213ENST00000428546 LINC01553A4QN01 128 aa12.9□□□□□ -0.34
KCNMA1-213ENST00000428546 EPOPA6NHQ4 379 aa12.9□□□□□ -0.34
KCNMA1-213ENST00000428546 WNT7AO00755 349 aa12.9□□□□□ -0.34
KCNMA1-213ENST00000428546 ENPP3O14638 875 aa12.9□□□□□ -0.34
KCNMA1-213ENST00000428546 GPR182O15218 404 aa12.9□□□□□ -0.34
KCNMA1-213ENST00000428546 CD2BP2O95400 341 aaKnown RBP12.9□□□□□ -0.34
KCNMA1-213ENST00000428546 MCM2P49736 904 aa12.9□□□□□ -0.34
KCNMA1-213ENST00000428546 CRYBB1P53674 252 aaPredicted RBP12.9□□□□□ -0.34
KCNMA1-213ENST00000428546 ADGRE1Q14246 886 aa12.9□□□□□ -0.34
KCNMA1-213ENST00000428546 EPHA7Q15375 998 aa12.9□□□□□ -0.34
KCNMA1-213ENST00000428546 PAN2Q504Q3 1202 aaKnown RBP12.9□□□□□ -0.34
KCNMA1-213ENST00000428546 XKR9Q5GH70 373 aa12.9□□□□□ -0.34
KCNMA1-213ENST00000428546 TTC38Q5R3I4 469 aa12.9□□□□□ -0.34
KCNMA1-213ENST00000428546 FBXO22Q8NEZ5 403 aa12.9□□□□□ -0.34
KCNMA1-213ENST00000428546 TMEM40Q8WWA1 233 aa12.9□□□□□ -0.34
KCNMA1-213ENST00000428546 SLC7A3Q8WY07 619 aa12.9□□□□□ -0.34
KCNMA1-213ENST00000428546 TOP1MTQ969P6 601 aa12.9□□□□□ -0.34
KCNMA1-213ENST00000428546 FOXP1Q9H334 677 aaPredicted RBP12.9□□□□□ -0.34
KCNMA1-213ENST00000428546 ST3GAL5Q9UNP4 418 aa12.9□□□□□ -0.34
KCNMA1-213ENST00000428546 SMC3Q9UQE7 1217 aa12.9□□□□□ -0.34
KCNMA1-213ENST00000428546 SQORQ9Y6N5 450 aa12.9□□□□□ -0.34
KCNMA1-213ENST00000428546 COL6A3P12111 3177 aa12.9□□□□□ -0.34
KCNMA1-213ENST00000428546 KDM3AQ9Y4C1 1321 aa12.89□□□□□ -0.35
KCNMA1-213ENST00000428546 POTEMA6NI47 508 aa12.89□□□□□ -0.35
KCNMA1-213ENST00000428546 CSPG5O95196 566 aa12.89□□□□□ -0.35
KCNMA1-213ENST00000428546 STAG3L1P0CL83 205 aa12.89□□□□□ -0.35
KCNMA1-213ENST00000428546 GJB2P29033 226 aa12.89□□□□□ -0.35
KCNMA1-213ENST00000428546 YWHABP31946 246 aaKnown RBP12.89□□□□□ -0.35
KCNMA1-213ENST00000428546 NPEPPSP55786 919 aa12.89□□□□□ -0.35
KCNMA1-213ENST00000428546 BTG3Q14201 252 aaPredicted RBP12.89□□□□□ -0.35
KCNMA1-213ENST00000428546 B3GNT9Q6UX72 402 aa12.89□□□□□ -0.35
KCNMA1-213ENST00000428546 ANO5Q75V66 913 aa12.89□□□□□ -0.35
KCNMA1-213ENST00000428546 OTUD6AQ7L8S5 288 aa12.89□□□□□ -0.35
KCNMA1-213ENST00000428546 RHPN2Q8IUC4 686 aa12.89□□□□□ -0.35
KCNMA1-213ENST00000428546 NOSTRINQ8IVI9 506 aa12.89□□□□□ -0.35
KCNMA1-213ENST00000428546 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.89□□□□□ -0.35
KCNMA1-213ENST00000428546 FIBCD1Q8N539 461 aa12.89□□□□□ -0.35
KCNMA1-213ENST00000428546 RNF169Q8NCN4 708 aa12.89□□□□□ -0.35
KCNMA1-213ENST00000428546 NLRP4Q96MN2 994 aa12.89□□□□□ -0.35
KCNMA1-213ENST00000428546 ADAM2Q99965 735 aa12.89□□□□□ -0.35
KCNMA1-213ENST00000428546 EIF2AK1Q9BQI3 630 aaKnown RBP12.89□□□□□ -0.35
KCNMA1-213ENST00000428546 JPH2Q9BR39 696 aaPredicted RBP12.89□□□□□ -0.35
KCNMA1-213ENST00000428546 C17orf80Q9BSJ5 609 aa12.89□□□□□ -0.35
KCNMA1-213ENST00000428546 NIFKQ9BYG3 293 aaKnown RBP12.89□□□□□ -0.35
KCNMA1-213ENST00000428546 ZSWIM4Q9H7M6 989 aa12.89□□□□□ -0.35
KCNMA1-213ENST00000428546 CYP26B1Q9NR63 512 aa12.89□□□□□ -0.35
KCNMA1-213ENST00000428546 SUCLA2Q9P2R7 463 aaPredicted RBP12.89□□□□□ -0.35
KCNMA1-213ENST00000428546 PRRC2BQ5JSZ5 2229 aaKnown RBP12.88□□□□□ -0.35
KCNMA1-213ENST00000428546 GPR32O75388 356 aa12.88□□□□□ -0.35
KCNMA1-213ENST00000428546 OR52Z1P0C646 297 aa12.88□□□□□ -0.35
KCNMA1-213ENST00000428546 ZSCAN20P17040 1043 aaPredicted RBP12.88□□□□□ -0.35
KCNMA1-213ENST00000428546 FGFR4P22455 802 aa12.88□□□□□ -0.35
KCNMA1-213ENST00000428546 CTNNB1P35222 781 aa12.88□□□□□ -0.35
KCNMA1-213ENST00000428546 TECP42680 631 aa12.88□□□□□ -0.35
KCNMA1-213ENST00000428546 GPC3P51654 580 aa12.88□□□□□ -0.35
KCNMA1-213ENST00000428546 GRB10Q13322 594 aa12.88□□□□□ -0.35
KCNMA1-213ENST00000428546 MKRN4PQ13434 485 aaPredicted RBP12.88□□□□□ -0.35
KCNMA1-213ENST00000428546 DRP2Q13474 957 aa12.88□□□□□ -0.35
KCNMA1-213ENST00000428546 NBR1Q14596 966 aa12.88□□□□□ -0.35
KCNMA1-213ENST00000428546 SPOUT1Q5T280 376 aaKnown RBP12.88□□□□□ -0.35
KCNMA1-213ENST00000428546 FAM228AQ86W67 206 aa12.88□□□□□ -0.35
KCNMA1-213ENST00000428546 NPAS4Q8IUM7 802 aa12.88□□□□□ -0.35
KCNMA1-213ENST00000428546 LINC01599Q8WXQ3 324 aa12.88□□□□□ -0.35
KCNMA1-213ENST00000428546 GCOM2Q9BZD3 368 aaPredicted RBP12.88□□□□□ -0.35
KCNMA1-213ENST00000428546 TSPYL2Q9H2G4 693 aaPredicted RBP12.88□□□□□ -0.35
KCNMA1-213ENST00000428546 TMEM60Q9H2L4 133 aa12.88□□□□□ -0.35
KCNMA1-213ENST00000428546 TMX1Q9H3N1 280 aa12.88□□□□□ -0.35
KCNMA1-213ENST00000428546 ERVK-5Q9HDB9 667 aa12.88□□□□□ -0.35
KCNMA1-213ENST00000428546 WRAP73Q9P2S5 460 aaPredicted RBP12.88□□□□□ -0.35
KCNMA1-213ENST00000428546 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.88□□□□□ -0.35
KCNMA1-213ENST00000428546 PCDHB7Q9Y5E2 793 aa12.88□□□□□ -0.35
KCNMA1-213ENST00000428546 FNDC1Q4ZHG4 1894 aaPredicted RBP12.88□□□□□ -0.35
KCNMA1-213ENST00000428546 ADGRA3Q8IWK6 1321 aa12.88□□□□□ -0.35
KCNMA1-213ENST00000428546 CSDE1O75534 798 aaKnown RBP12.87□□□□□ -0.35
KCNMA1-213ENST00000428546 STBD1O95210 358 aa12.87□□□□□ -0.35
KCNMA1-213ENST00000428546 EIF4BP23588 611 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms