RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 COL4A4P53420 1690 aaPredicted RBP20.72■□□□□ 0.91
GPC1-205ENST00000427506 FAM205CA6NFA0 338 aa20.71■□□□□ 0.91
GPC1-205ENST00000427506 TBX3O15119 743 aa20.71■□□□□ 0.91
GPC1-205ENST00000427506 GPR32O75388 356 aa20.71■□□□□ 0.91
GPC1-205ENST00000427506 CTNNB1P35222 781 aa20.71■□□□□ 0.91
GPC1-205ENST00000427506 PSMC5P62195 406 aa20.71■□□□□ 0.91
GPC1-205ENST00000427506 PPP2R5CQ13362 524 aa20.71■□□□□ 0.91
GPC1-205ENST00000427506 GPM6BQ13491 265 aa20.71■□□□□ 0.91
GPC1-205ENST00000427506 POTEDQ86YR6 584 aa20.71■□□□□ 0.91
GPC1-205ENST00000427506 CCDC83Q8IWF9 413 aa20.71■□□□□ 0.91
GPC1-205ENST00000427506 DIS3L2Q8IYB7 885 aaKnown RBP20.71■□□□□ 0.91
GPC1-205ENST00000427506 SCLT1Q96NL6 688 aa20.71■□□□□ 0.91
GPC1-205ENST00000427506 ASB2Q96Q27 587 aa20.71■□□□□ 0.91
GPC1-205ENST00000427506 BTBD18B2RXH4 712 aa20.7■□□□□ 0.9
GPC1-205ENST00000427506 EML1O00423 815 aa20.7■□□□□ 0.9
GPC1-205ENST00000427506 DGKIO75912 1065 aa20.7■□□□□ 0.9
GPC1-205ENST00000427506 PTPROQ16827 1216 aa20.7■□□□□ 0.9
GPC1-205ENST00000427506 FAM43BQ6ZT52 329 aaPredicted RBP20.7■□□□□ 0.9
GPC1-205ENST00000427506 ZNF710Q8N1W2 664 aa20.7■□□□□ 0.9
GPC1-205ENST00000427506 LINC01465Q8N7H1 131 aa20.7■□□□□ 0.9
GPC1-205ENST00000427506 ZNF689Q96CS4 500 aaPredicted RBP20.7■□□□□ 0.9
GPC1-205ENST00000427506 ZNF668Q96K58 619 aaPredicted RBP20.7■□□□□ 0.9
GPC1-205ENST00000427506 ADAM2Q99965 735 aa20.7■□□□□ 0.9
GPC1-205ENST00000427506 SH2D3AQ9BRG2 576 aa20.7■□□□□ 0.9
GPC1-205ENST00000427506 NIFKQ9BYG3 293 aaKnown RBP20.7■□□□□ 0.9
GPC1-205ENST00000427506 VAV3Q9UKW4 847 aa20.7■□□□□ 0.9
GPC1-205ENST00000427506 RWDD3Q9Y3V2 267 aa20.7■□□□□ 0.9
GPC1-205ENST00000427506 TMEM150BA6NC51 233 aa20.69■□□□□ 0.9
GPC1-205ENST00000427506 H3BNC9 293 aa20.69■□□□□ 0.9
GPC1-205ENST00000427506 DKC1O60832 514 aaKnown RBP eCLIP20.69■□□□□ 0.9
GPC1-205ENST00000427506 SARSP49591 514 aaKnown RBP20.69■□□□□ 0.9
GPC1-205ENST00000427506 DNM2P50570 870 aa20.69■□□□□ 0.9
GPC1-205ENST00000427506 ST3GAL1Q11201 340 aa20.69■□□□□ 0.9
GPC1-205ENST00000427506 SAFBQ15424 915 aaKnown RBP eCLIP20.69■□□□□ 0.9
GPC1-205ENST00000427506 TARBP2Q15633 366 aaKnown RBP20.69■□□□□ 0.9
GPC1-205ENST00000427506 AAK1Q2M2I8 961 aa20.69■□□□□ 0.9
GPC1-205ENST00000427506 NCAPH2Q6IBW4 605 aa20.69■□□□□ 0.9
GPC1-205ENST00000427506 FAM228AQ86W67 206 aa20.69■□□□□ 0.9
GPC1-205ENST00000427506 SLFN12Q8IYM2 578 aa20.69■□□□□ 0.9
GPC1-205ENST00000427506 HAS1Q92839 578 aa20.69■□□□□ 0.9
GPC1-205ENST00000427506 TNFRSF25Q93038 417 aa20.69■□□□□ 0.9
GPC1-205ENST00000427506 ZSCAN31Q96LW9 406 aaPredicted RBP20.69■□□□□ 0.9
GPC1-205ENST00000427506 C1orf112Q9NSG2 853 aa20.69■□□□□ 0.9
GPC1-205ENST00000427506 RNF216Q9NWF9 866 aaPredicted RBP20.69■□□□□ 0.9
GPC1-205ENST00000427506 PCDHB7Q9Y5E2 793 aa20.69■□□□□ 0.9
GPC1-205ENST00000427506 COL4A6Q14031 1691 aa20.69■□□□□ 0.9
GPC1-205ENST00000427506 UNC80Q8N2C7 3258 aa20.69■□□□□ 0.9
GPC1-205ENST00000427506 MGEA5O60502 916 aa20.68■□□□□ 0.9
GPC1-205ENST00000427506 BMPR1AP36894 532 aa20.68■□□□□ 0.9
GPC1-205ENST00000427506 QARSP47897 775 aaKnown RBP20.68■□□□□ 0.9
GPC1-205ENST00000427506 GUCY1B3Q02153 619 aa20.68■□□□□ 0.9
GPC1-205ENST00000427506 TFF2Q03403 129 aa20.68■□□□□ 0.9
GPC1-205ENST00000427506 PAN2Q504Q3 1202 aaKnown RBP20.68■□□□□ 0.9
GPC1-205ENST00000427506 NLRP7Q8WX94 980 aa20.68■□□□□ 0.9
GPC1-205ENST00000427506 HLA-CQ95604 372 aa20.68■□□□□ 0.9
GPC1-205ENST00000427506 ADAMTS10Q9H324 1103 aa20.68■□□□□ 0.9
GPC1-205ENST00000427506 RC3H2Q9HBD1 1191 aaKnown RBP20.68■□□□□ 0.9
GPC1-205ENST00000427506 RGS18Q9NS28 235 aa20.68■□□□□ 0.9
GPC1-205ENST00000427506 COG5Q9UP83 839 aa20.68■□□□□ 0.9
GPC1-205ENST00000427506 EVPLQ92817 2033 aa20.68■□□□□ 0.9
GPC1-205ENST00000427506 STBD1O95210 358 aa20.67■□□□□ 0.9
GPC1-205ENST00000427506 RB1P06400 928 aa20.67■□□□□ 0.9
GPC1-205ENST00000427506 P4HBP07237 508 aaKnown RBP20.67■□□□□ 0.9
GPC1-205ENST00000427506 GPC3P51654 580 aa20.67■□□□□ 0.9
GPC1-205ENST00000427506 EPHA7Q15375 998 aa20.67■□□□□ 0.9
GPC1-205ENST00000427506 SLC24A5Q71RS6 500 aa20.67■□□□□ 0.9
GPC1-205ENST00000427506 CMTR2Q8IYT2 770 aaKnown RBP20.67■□□□□ 0.9
GPC1-205ENST00000427506 MRPL38Q96DV4 380 aaKnown RBP20.67■□□□□ 0.9
GPC1-205ENST00000427506 C8orf76Q96K31 380 aa20.67■□□□□ 0.9
GPC1-205ENST00000427506 LLPHQ9BRT6 129 aaKnown RBP20.67■□□□□ 0.9
GPC1-205ENST00000427506 PRRC2BQ5JSZ5 2229 aaKnown RBP20.67■□□□□ 0.9
GPC1-205ENST00000427506 LOXHD1Q8IVV2 1947 aa20.66■□□□□ 0.9
GPC1-205ENST00000427506 ZSCAN20P17040 1043 aaPredicted RBP20.66■□□□□ 0.9
GPC1-205ENST00000427506 EIF4BP23588 611 aaKnown RBP20.66■□□□□ 0.9
GPC1-205ENST00000427506 CDC42EP1Q00587 391 aa20.66■□□□□ 0.9
GPC1-205ENST00000427506 CALCRLQ16602 461 aa20.66■□□□□ 0.9
GPC1-205ENST00000427506 PLA2G4FQ68DD2 849 aa20.66■□□□□ 0.9
GPC1-205ENST00000427506 ANO5Q75V66 913 aa20.66■□□□□ 0.9
GPC1-205ENST00000427506 CRIPAKQ8N1N5 446 aa20.66■□□□□ 0.9
GPC1-205ENST00000427506 KIF2CQ99661 725 aa20.66■□□□□ 0.9
GPC1-205ENST00000427506 JPH2Q9BR39 696 aaPredicted RBP20.66■□□□□ 0.9
GPC1-205ENST00000427506 C11orf84Q9BUA3 381 aaPredicted RBP20.66■□□□□ 0.9
GPC1-205ENST00000427506 SH2B1Q9NRF2 756 aaPredicted RBP20.66■□□□□ 0.9
GPC1-205ENST00000427506 TTC3P53804 2025 aa20.65■□□□□ 0.9
GPC1-205ENST00000427506 C5orf67F2Z3F1 127 aa20.65■□□□□ 0.9
GPC1-205ENST00000427506 GATMP50440 423 aa20.65■□□□□ 0.9
GPC1-205ENST00000427506 DRP2Q13474 957 aa20.65■□□□□ 0.9
GPC1-205ENST00000427506 FAM184AQ8NB25 1140 aa20.65■□□□□ 0.9
GPC1-205ENST00000427506 CLP1Q92989 425 aaKnown RBP20.65■□□□□ 0.9
GPC1-205ENST00000427506 DYDC2Q96IM9 177 aa20.65■□□□□ 0.9
GPC1-205ENST00000427506 CEP170P1Q96L14 293 aa20.65■□□□□ 0.9
GPC1-205ENST00000427506 LXNQ9BS40 222 aa20.65■□□□□ 0.9
GPC1-205ENST00000427506 GCOM2Q9BZD3 368 aaPredicted RBP20.65■□□□□ 0.9
GPC1-205ENST00000427506 CYP26B1Q9NR63 512 aa20.65■□□□□ 0.9
GPC1-205ENST00000427506 SUCLA2Q9P2R7 463 aaPredicted RBP20.65■□□□□ 0.9
GPC1-205ENST00000427506 PCDHA12Q9UN75 941 aa20.65■□□□□ 0.9
GPC1-205ENST00000427506 MRPL42Q9Y6G3 142 aaKnown RBP20.65■□□□□ 0.9
GPC1-205ENST00000427506 PRUNE2Q8WUY3 3088 aa20.65■□□□□ 0.9
GPC1-205ENST00000427506 WDR81Q562E7 1941 aa20.65■□□□□ 0.9
GPC1-205ENST00000427506 C9IYK1 514 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms