RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 CALCRLQ16602 461 aa8.35□□□□□ -1.07
LINC01049-201ENST00000426840 SWSAP1Q6NVH7 229 aa8.35□□□□□ -1.07
LINC01049-201ENST00000426840 PLPPR4Q7Z2D5 763 aa8.35□□□□□ -1.07
LINC01049-201ENST00000426840 TRIM50Q86XT4 487 aa8.35□□□□□ -1.07
LINC01049-201ENST00000426840 ADAM32Q8TC27 787 aa8.35□□□□□ -1.07
LINC01049-201ENST00000426840 VTI1AQ96AJ9 217 aa8.35□□□□□ -1.07
LINC01049-201ENST00000426840 RNPEPQ9H4A4 650 aa8.35□□□□□ -1.07
LINC01049-201ENST00000426840 SMARCAD1Q9H4L7 1026 aa8.35□□□□□ -1.07
LINC01049-201ENST00000426840 TUT1Q9H6E5 874 aaKnown RBP8.35□□□□□ -1.07
LINC01049-201ENST00000426840 TTC12Q9H892 705 aaPredicted RBP8.35□□□□□ -1.07
LINC01049-201ENST00000426840 DISC1Q9NRI5 854 aa8.35□□□□□ -1.07
LINC01049-201ENST00000426840 PCDHA12Q9UN75 941 aa8.35□□□□□ -1.07
LINC01049-201ENST00000426840 RBM19Q9Y4C8 960 aaKnown RBP8.35□□□□□ -1.07
LINC01049-201ENST00000426840 PCDHA10Q9Y5I2 948 aa8.35□□□□□ -1.07
LINC01049-201ENST00000426840 MAFBQ9Y5Q3 323 aaPredicted RBP8.35□□□□□ -1.07
LINC01049-201ENST00000426840 EMSYQ7Z589 1322 aa8.34□□□□□ -1.07
LINC01049-201ENST00000426840 A0A0U1RQG5 324 aaPredicted RBP8.34□□□□□ -1.07
LINC01049-201ENST00000426840 WDR64B1ANS9 1081 aa8.34□□□□□ -1.07
LINC01049-201ENST00000426840 STBD1O95210 358 aa8.34□□□□□ -1.07
LINC01049-201ENST00000426840 BRD1O95696 1058 aa8.34□□□□□ -1.07
LINC01049-201ENST00000426840 F13A1P00488 732 aa8.34□□□□□ -1.07
LINC01049-201ENST00000426840 CD4P01730 458 aa8.34□□□□□ -1.07
LINC01049-201ENST00000426840 PSAPP07602 524 aa8.34□□□□□ -1.07
LINC01049-201ENST00000426840 OR52Z1P0C646 297 aa8.34□□□□□ -1.07
LINC01049-201ENST00000426840 FSHRP23945 695 aa8.34□□□□□ -1.07
LINC01049-201ENST00000426840 SFNP31947 248 aa8.34□□□□□ -1.07
LINC01049-201ENST00000426840 JAK3P52333 1124 aa8.34□□□□□ -1.07
LINC01049-201ENST00000426840 RTP1P59025 263 aa8.34□□□□□ -1.07
LINC01049-201ENST00000426840 ATP2C1P98194 919 aaPredicted RBP8.34□□□□□ -1.07
LINC01049-201ENST00000426840 TLE2Q04725 743 aa8.34□□□□□ -1.07
LINC01049-201ENST00000426840 PTPN11Q06124 597 aaPredicted RBP8.34□□□□□ -1.07
LINC01049-201ENST00000426840 PTPAQ15257 358 aa8.34□□□□□ -1.07
LINC01049-201ENST00000426840 EPHA7Q15375 998 aa8.34□□□□□ -1.07
LINC01049-201ENST00000426840 IL17AQ16552 155 aa8.34□□□□□ -1.07
LINC01049-201ENST00000426840 KIAA0753Q2KHM9 967 aa8.34□□□□□ -1.07
LINC01049-201ENST00000426840 TRIM60Q495X7 471 aa8.34□□□□□ -1.07
LINC01049-201ENST00000426840 FOXD4L5Q5VV16 416 aaPredicted RBP8.34□□□□□ -1.07
LINC01049-201ENST00000426840 MIS18BP1Q6P0N0 1132 aa8.34□□□□□ -1.07
LINC01049-201ENST00000426840 NFRKBQ6P4R8 1299 aa8.34□□□□□ -1.07
LINC01049-201ENST00000426840 ANKRD33Q7Z3H0 272 aa8.34□□□□□ -1.07
LINC01049-201ENST00000426840 MIER3Q7Z3K6 550 aa8.34□□□□□ -1.07
LINC01049-201ENST00000426840 SESTD1Q86VW0 696 aa8.34□□□□□ -1.07
LINC01049-201ENST00000426840 CCDC60Q8IWA6 550 aaPredicted RBP8.34□□□□□ -1.07
LINC01049-201ENST00000426840 SMAP1Q8IYB5 467 aaPredicted RBP8.34□□□□□ -1.07
LINC01049-201ENST00000426840 RDM1Q8NG50 284 aa8.34□□□□□ -1.07
LINC01049-201ENST00000426840 AFAP1L1Q8TED9 768 aa8.34□□□□□ -1.07
LINC01049-201ENST00000426840 FOXD4L4Q8WXT5 416 aaPredicted RBP8.34□□□□□ -1.07
LINC01049-201ENST00000426840 CDK15Q96Q40 435 aa8.34□□□□□ -1.07
LINC01049-201ENST00000426840 HTATIP2Q9BUP3 242 aa8.34□□□□□ -1.07
LINC01049-201ENST00000426840 SEZ6LQ9BYH1 1024 aa8.34□□□□□ -1.07
LINC01049-201ENST00000426840 HDAC6Q9UBN7 1215 aa8.34□□□□□ -1.07
LINC01049-201ENST00000426840 BRCA2P51587 3418 aa8.33□□□□□ -1.08
LINC01049-201ENST00000426840 WDR81Q562E7 1941 aa8.33□□□□□ -1.08
LINC01049-201ENST00000426840 ALPK3Q96L96 1907 aa8.33□□□□□ -1.08
LINC01049-201ENST00000426840 LAD1O00515 517 aa8.33□□□□□ -1.08
LINC01049-201ENST00000426840 CHMP2AO43633 222 aa8.33□□□□□ -1.08
LINC01049-201ENST00000426840 ZNF862O60290 1169 aa8.33□□□□□ -1.08
LINC01049-201ENST00000426840 SLITRK3O94933 977 aa8.33□□□□□ -1.08
LINC01049-201ENST00000426840 HOXC8P31273 242 aa8.33□□□□□ -1.08
LINC01049-201ENST00000426840 PRPHP41219 470 aa8.33□□□□□ -1.08
LINC01049-201ENST00000426840 GRM5P41594 1212 aa8.33□□□□□ -1.08
LINC01049-201ENST00000426840 TECP42680 631 aa8.33□□□□□ -1.08
LINC01049-201ENST00000426840 CHMP4BP1P59074 171 aa8.33□□□□□ -1.08
LINC01049-201ENST00000426840 ADAM17P78536 824 aa8.33□□□□□ -1.08
LINC01049-201ENST00000426840 ZNF200P98182 395 aaPredicted RBP8.33□□□□□ -1.08
LINC01049-201ENST00000426840 PDIA5Q14554 519 aa8.33□□□□□ -1.08
LINC01049-201ENST00000426840 PLCB4Q15147 1175 aa8.33□□□□□ -1.08
LINC01049-201ENST00000426840 SF3A1Q15459 793 aaKnown RBP8.33□□□□□ -1.08
LINC01049-201ENST00000426840 UGCGQ16739 394 aa8.33□□□□□ -1.08
LINC01049-201ENST00000426840 CTC1Q2NKJ3 1217 aa8.33□□□□□ -1.08
LINC01049-201ENST00000426840 GDF6Q6KF10 455 aaPredicted RBP8.33□□□□□ -1.08
LINC01049-201ENST00000426840 FAM126BQ8IXS8 530 aa8.33□□□□□ -1.08
LINC01049-201ENST00000426840 GLG1Q92896 1179 aa8.33□□□□□ -1.08
LINC01049-201ENST00000426840 TOX2Q96NM4 488 aa8.33□□□□□ -1.08
LINC01049-201ENST00000426840 CTAGE1Q96RT6 745 aa8.33□□□□□ -1.08
LINC01049-201ENST00000426840 USP28Q96RU2 1077 aa8.33□□□□□ -1.08
LINC01049-201ENST00000426840 HSD17B14Q9BPX1 270 aa8.33□□□□□ -1.08
LINC01049-201ENST00000426840 KATNAL1Q9BW62 490 aa8.33□□□□□ -1.08
LINC01049-201ENST00000426840 FTOQ9C0B1 505 aaKnown RBP eCLIP8.33□□□□□ -1.08
LINC01049-201ENST00000426840 AZI2Q9H6S1 392 aa8.33□□□□□ -1.08
LINC01049-201ENST00000426840 ZNF302Q9NR11 478 aa8.33□□□□□ -1.08
LINC01049-201ENST00000426840 ERAP1Q9NZ08 941 aa8.33□□□□□ -1.08
LINC01049-201ENST00000426840 TFIP11Q9UBB9 837 aaKnown RBP8.33□□□□□ -1.08
LINC01049-201ENST00000426840 GABBR1Q9UBS5 961 aa8.33□□□□□ -1.08
LINC01049-201ENST00000426840 GTF2IRD1Q9UHL9 959 aa8.33□□□□□ -1.08
LINC01049-201ENST00000426840 ATP11BQ9Y2G3 1177 aa8.33□□□□□ -1.08
LINC01049-201ENST00000426840 CLIC4Q9Y696 253 aa8.33□□□□□ -1.08
LINC01049-201ENST00000426840 TRIP12Q14669 1992 aaPredicted RBP8.33□□□□□ -1.08
LINC01049-201ENST00000426840 MYH9P35579 1960 aaKnown RBP8.32□□□□□ -1.08
LINC01049-201ENST00000426840 BACH1O14867 736 aa8.32□□□□□ -1.08
LINC01049-201ENST00000426840 B4GALT4O60513 344 aa8.32□□□□□ -1.08
LINC01049-201ENST00000426840 P4HBP07237 508 aaKnown RBP8.32□□□□□ -1.08
LINC01049-201ENST00000426840 SPATA31C1P0DKV0 1188 aa8.32□□□□□ -1.08
LINC01049-201ENST00000426840 SMIM10L2AP0DMW4 78 aa8.32□□□□□ -1.08
LINC01049-201ENST00000426840 SMIM10L2BP0DMW5 78 aa8.32□□□□□ -1.08
LINC01049-201ENST00000426840 MARK3P27448 753 aa8.32□□□□□ -1.08
LINC01049-201ENST00000426840 ANP32AP39687 249 aaKnown RBP8.32□□□□□ -1.08
LINC01049-201ENST00000426840 SLC26A2P50443 739 aa8.32□□□□□ -1.08
LINC01049-201ENST00000426840 RAB15P59190 212 aa8.32□□□□□ -1.08
LINC01049-201ENST00000426840 FAAP100Q0VG06 881 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms