RNA–Protein interactions for RNA: ENST00000425060.1

IGHV3-47-201, Transcript of immunoglobulin heavy variable 3-47 (pseudogene), humanhuman

BASIC

Gene IGHV3-47, Length 335 nt, Biotype IG V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-47-201ENST00000425060 HSD17B14Q9BPX1 270 aa20.09■□□□□ 0.81
IGHV3-47-201ENST00000425060 SH2D3AQ9BRG2 576 aa20.09■□□□□ 0.81
IGHV3-47-201ENST00000425060 ADAMTS10Q9H324 1103 aa20.09■□□□□ 0.81
IGHV3-47-201ENST00000425060 TMX1Q9H3N1 280 aa20.09■□□□□ 0.81
IGHV3-47-201ENST00000425060 ERVK-5Q9HDB9 667 aa20.09■□□□□ 0.81
IGHV3-47-201ENST00000425060 INSL6Q9Y581 213 aa20.09■□□□□ 0.81
IGHV3-47-201ENST00000425060 EPOPA6NHQ4 379 aa20.08■□□□□ 0.81
IGHV3-47-201ENST00000425060 DKC1O60832 514 aaKnown RBP eCLIP20.08■□□□□ 0.81
IGHV3-47-201ENST00000425060 MAFO75444 373 aaPredicted RBP20.08■□□□□ 0.81
IGHV3-47-201ENST00000425060 MCM7P33993 719 aa20.08■□□□□ 0.81
IGHV3-47-201ENST00000425060 TXKP42681 527 aa20.08■□□□□ 0.81
IGHV3-47-201ENST00000425060 TRAPPC10P48553 1259 aa20.08■□□□□ 0.81
IGHV3-47-201ENST00000425060 PAK2Q13177 524 aa20.08■□□□□ 0.81
IGHV3-47-201ENST00000425060 DRP2Q13474 957 aa20.08■□□□□ 0.81
IGHV3-47-201ENST00000425060 KIZQ2M2Z5 673 aa20.08■□□□□ 0.81
IGHV3-47-201ENST00000425060 TMEM266Q2M3C6 531 aa20.08■□□□□ 0.81
IGHV3-47-201ENST00000425060 FAM43BQ6ZT52 329 aaPredicted RBP20.08■□□□□ 0.81
IGHV3-47-201ENST00000425060 ZNF710Q8N1W2 664 aa20.08■□□□□ 0.81
IGHV3-47-201ENST00000425060 DYDC2Q96IM9 177 aa20.08■□□□□ 0.81
IGHV3-47-201ENST00000425060 LXNQ9BS40 222 aa20.08■□□□□ 0.81
IGHV3-47-201ENST00000425060 FTHL17Q9BXU8 183 aa20.08■□□□□ 0.81
IGHV3-47-201ENST00000425060 SUGCTQ9HAC7 445 aa20.08■□□□□ 0.81
IGHV3-47-201ENST00000425060 GINS2Q9Y248 185 aa20.08■□□□□ 0.81
IGHV3-47-201ENST00000425060 TTC3P53804 2025 aa20.08■□□□□ 0.8
IGHV3-47-201ENST00000425060 LINC01553A4QN01 128 aa20.07■□□□□ 0.8
IGHV3-47-201ENST00000425060 GJB2P29033 226 aa20.07■□□□□ 0.8
IGHV3-47-201ENST00000425060 TOB1P50616 345 aaPredicted RBP20.07■□□□□ 0.8
IGHV3-47-201ENST00000425060 NLRP11P59045 1033 aaKnown RBP20.07■□□□□ 0.8
IGHV3-47-201ENST00000425060 ZNF174Q15697 407 aa20.07■□□□□ 0.8
IGHV3-47-201ENST00000425060 PLA2G4FQ68DD2 849 aa20.07■□□□□ 0.8
IGHV3-47-201ENST00000425060 C4orf32Q8N8J7 132 aa20.07■□□□□ 0.8
IGHV3-47-201ENST00000425060 ZNF579Q8NAF0 562 aaKnown RBP20.07■□□□□ 0.8
IGHV3-47-201ENST00000425060 MAP7D2Q96T17 732 aa20.07■□□□□ 0.8
IGHV3-47-201ENST00000425060 PPP1R16BQ96T49 567 aa20.07■□□□□ 0.8
IGHV3-47-201ENST00000425060 OSMRQ99650 979 aa20.07■□□□□ 0.8
IGHV3-47-201ENST00000425060 EIF2AK1Q9BQI3 630 aaKnown RBP20.07■□□□□ 0.8
IGHV3-47-201ENST00000425060 TSPYL2Q9H2G4 693 aaPredicted RBP20.07■□□□□ 0.8
IGHV3-47-201ENST00000425060 ZSWIM4Q9H7M6 989 aa20.07■□□□□ 0.8
IGHV3-47-201ENST00000425060 CERS4Q9HA82 394 aa20.07■□□□□ 0.8
IGHV3-47-201ENST00000425060 CYP26B1Q9NR63 512 aa20.07■□□□□ 0.8
IGHV3-47-201ENST00000425060 AKT3Q9Y243 479 aa20.07■□□□□ 0.8
IGHV3-47-201ENST00000425060 KIF3AQ9Y496 699 aa20.07■□□□□ 0.8
IGHV3-47-201ENST00000425060 ZBTB39O15060 712 aa20.06■□□□□ 0.8
IGHV3-47-201ENST00000425060 RPS6KA5O75582 802 aa20.06■□□□□ 0.8
IGHV3-47-201ENST00000425060 UPP2O95045 317 aa20.06■□□□□ 0.8
IGHV3-47-201ENST00000425060 LYPLA2O95372 231 aa20.06■□□□□ 0.8
IGHV3-47-201ENST00000425060 GPC3P51654 580 aa20.06■□□□□ 0.8
IGHV3-47-201ENST00000425060 NPEPPSP55786 919 aa20.06■□□□□ 0.8
IGHV3-47-201ENST00000425060 ERVK-21P61565 698 aa20.06■□□□□ 0.8
IGHV3-47-201ENST00000425060 CUL4AQ13619 759 aa20.06■□□□□ 0.8
IGHV3-47-201ENST00000425060 CTTNQ14247 550 aaKnown RBP20.06■□□□□ 0.8
IGHV3-47-201ENST00000425060 TTC38Q5R3I4 469 aa20.06■□□□□ 0.8
IGHV3-47-201ENST00000425060 FAM228AQ86W67 206 aa20.06■□□□□ 0.8
IGHV3-47-201ENST00000425060 MAFAQ8NHW3 353 aaPredicted RBP20.06■□□□□ 0.8
IGHV3-47-201ENST00000425060 GAS2L1Q99501 681 aaPredicted RBP20.06■□□□□ 0.8
IGHV3-47-201ENST00000425060 RC3H2Q9HBD1 1191 aaKnown RBP20.06■□□□□ 0.8
IGHV3-47-201ENST00000425060 ST3GAL5Q9UNP4 418 aa20.06■□□□□ 0.8
IGHV3-47-201ENST00000425060 PPME1Q9Y570 386 aa20.06■□□□□ 0.8
IGHV3-47-201ENST00000425060 RFXAPO00287 272 aa20.05■□□□□ 0.8
IGHV3-47-201ENST00000425060 MGEA5O60502 916 aa20.05■□□□□ 0.8
IGHV3-47-201ENST00000425060 POU3F3P20264 500 aaPredicted RBP20.05■□□□□ 0.8
IGHV3-47-201ENST00000425060 YWHABP31946 246 aaKnown RBP20.05■□□□□ 0.8
IGHV3-47-201ENST00000425060 CYP4A11Q02928 519 aa20.05■□□□□ 0.8
IGHV3-47-201ENST00000425060 NFX1Q12986 1120 aaKnown RBP20.05■□□□□ 0.8
IGHV3-47-201ENST00000425060 DHX33Q9H6R0 707 aaKnown RBP20.05■□□□□ 0.8
IGHV3-47-201ENST00000425060 COL4A6Q14031 1691 aa20.05■□□□□ 0.8
IGHV3-47-201ENST00000425060 POTEMA6NI47 508 aa20.04■□□□□ 0.8
IGHV3-47-201ENST00000425060 GPR182O15218 404 aa20.04■□□□□ 0.8
IGHV3-47-201ENST00000425060 LPXNO60711 386 aa20.04■□□□□ 0.8
IGHV3-47-201ENST00000425060 EIF4BP23588 611 aaKnown RBP20.04■□□□□ 0.8
IGHV3-47-201ENST00000425060 GNL2Q13823 731 aaKnown RBP20.04■□□□□ 0.8
IGHV3-47-201ENST00000425060 NBR1Q14596 966 aa20.04■□□□□ 0.8
IGHV3-47-201ENST00000425060 ODR4Q5SWX8 454 aa20.04■□□□□ 0.8
IGHV3-47-201ENST00000425060 TPH2Q8IWU9 490 aa20.04■□□□□ 0.8
IGHV3-47-201ENST00000425060 NEK9Q8TD19 979 aa20.04■□□□□ 0.8
IGHV3-47-201ENST00000425060 ARNTL2Q8WYA1 636 aa20.04■□□□□ 0.8
IGHV3-47-201ENST00000425060 ZNF689Q96CS4 500 aaPredicted RBP20.04■□□□□ 0.8
IGHV3-47-201ENST00000425060 CEP170P1Q96L14 293 aa20.04■□□□□ 0.8
IGHV3-47-201ENST00000425060 TGS1Q96RS0 853 aaKnown RBP20.04■□□□□ 0.8
IGHV3-47-201ENST00000425060 NOL7Q9UMY1 257 aaKnown RBP20.04■□□□□ 0.8
IGHV3-47-201ENST00000425060 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.04■□□□□ 0.8
IGHV3-47-201ENST00000425060 OR52Z1P0C646 297 aa20.03■□□□□ 0.8
IGHV3-47-201ENST00000425060 SPATA31C1P0DKV0 1188 aa20.03■□□□□ 0.8
IGHV3-47-201ENST00000425060 CDC42EP1Q00587 391 aa20.03■□□□□ 0.8
IGHV3-47-201ENST00000425060 DSC3Q14574 896 aa20.03■□□□□ 0.8
IGHV3-47-201ENST00000425060 OTUD6AQ7L8S5 288 aa20.03■□□□□ 0.8
IGHV3-47-201ENST00000425060 ZNF668Q96K58 619 aaPredicted RBP20.03■□□□□ 0.8
IGHV3-47-201ENST00000425060 YME1L1Q96TA2 773 aa20.03■□□□□ 0.8
IGHV3-47-201ENST00000425060 JPH2Q9BR39 696 aaPredicted RBP20.03■□□□□ 0.8
IGHV3-47-201ENST00000425060 RGS18Q9NS28 235 aa20.03■□□□□ 0.8
IGHV3-47-201ENST00000425060 SMC3Q9UQE7 1217 aa20.03■□□□□ 0.8
IGHV3-47-201ENST00000425060 DGKIO75912 1065 aa20.02■□□□□ 0.8
IGHV3-47-201ENST00000425060 LINC00271P0C7V0 271 aa20.02■□□□□ 0.8
IGHV3-47-201ENST00000425060 DARSP14868 501 aaKnown RBP20.02■□□□□ 0.8
IGHV3-47-201ENST00000425060 TECP42680 631 aa20.02■□□□□ 0.8
IGHV3-47-201ENST00000425060 DNM2P50570 870 aa20.02■□□□□ 0.8
IGHV3-47-201ENST00000425060 FAM189BP81408 668 aa20.02■□□□□ 0.8
IGHV3-47-201ENST00000425060 SUCLA2Q9P2R7 463 aaPredicted RBP20.02■□□□□ 0.8
IGHV3-47-201ENST00000425060 PCDHB6Q9Y5E3 794 aa20.02■□□□□ 0.8
IGHV3-47-201ENST00000425060 TRANK1O15050 2925 aa20.02■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms