RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 ERP44Q9BS26 406 aa16.55■□□□□ 0.24
C9orf3-204ENST00000424143 ANO3Q9BYT9 981 aa16.55■□□□□ 0.24
C9orf3-204ENST00000424143 OSBPL7Q9BZF2 842 aa16.55■□□□□ 0.24
C9orf3-204ENST00000424143 DDX47Q9H0S4 455 aaKnown RBP16.55■□□□□ 0.24
C9orf3-204ENST00000424143 GPCPD1Q9NPB8 672 aa16.55■□□□□ 0.24
C9orf3-204ENST00000424143 PPANQ9NQ55 473 aaKnown RBP16.55■□□□□ 0.24
C9orf3-204ENST00000424143 ZDHHC18Q9NUE0 388 aa16.55■□□□□ 0.24
C9orf3-204ENST00000424143 PARP2Q9UGN5 583 aa16.55■□□□□ 0.24
C9orf3-204ENST00000424143 GOLGA6L10A0A0M3HER8 536 aa16.54■□□□□ 0.24
C9orf3-204ENST00000424143 CCDC169A6NNP5 214 aa16.54■□□□□ 0.24
C9orf3-204ENST00000424143 KCNQ2O43526 872 aa16.54■□□□□ 0.24
C9orf3-204ENST00000424143 AKR1B1P15121 316 aa16.54■□□□□ 0.24
C9orf3-204ENST00000424143 HPDP32754 393 aaPredicted RBP16.54■□□□□ 0.24
C9orf3-204ENST00000424143 RDXP35241 583 aaKnown RBP16.54■□□□□ 0.24
C9orf3-204ENST00000424143 GALCP54803 685 aa16.54■□□□□ 0.24
C9orf3-204ENST00000424143 DHX9Q08211 1270 aaKnown RBP16.54■□□□□ 0.24
C9orf3-204ENST00000424143 MYBPC2Q14324 1141 aa16.54■□□□□ 0.24
C9orf3-204ENST00000424143 PLS1Q14651 629 aa16.54■□□□□ 0.24
C9orf3-204ENST00000424143 CRY2Q49AN0 593 aa16.54■□□□□ 0.24
C9orf3-204ENST00000424143 CATSPER3Q86XQ3 398 aa16.54■□□□□ 0.24
C9orf3-204ENST00000424143 TMEM174Q8WUU8 243 aa16.54■□□□□ 0.24
C9orf3-204ENST00000424143 UBLCP1Q8WVY7 318 aaPredicted RBP16.54■□□□□ 0.24
C9orf3-204ENST00000424143 CCT6BQ92526 530 aa16.54■□□□□ 0.24
C9orf3-204ENST00000424143 XPO6Q96QU8 1125 aaKnown RBP16.54■□□□□ 0.24
C9orf3-204ENST00000424143 PABPC3Q9H361 631 aaKnown RBP16.54■□□□□ 0.24
C9orf3-204ENST00000424143 TBC1D7Q9P0N9 293 aa16.54■□□□□ 0.24
C9orf3-204ENST00000424143 CNOT8Q9UFF9 292 aaKnown RBP16.54■□□□□ 0.24
C9orf3-204ENST00000424143 SRP68Q9UHB9 627 aaKnown RBP16.54■□□□□ 0.24
C9orf3-204ENST00000424143 AMACRQ9UHK6 382 aa16.54■□□□□ 0.24
C9orf3-204ENST00000424143 GGA1Q9UJY5 639 aa16.54■□□□□ 0.24
C9orf3-204ENST00000424143 NOVA2Q9UNW9 492 aaKnown RBP16.54■□□□□ 0.24
C9orf3-204ENST00000424143 RTCBQ9Y3I0 505 aaKnown RBP16.54■□□□□ 0.24
C9orf3-204ENST00000424143 PFASO15067 1338 aa16.53■□□□□ 0.24
C9orf3-204ENST00000424143 MIF4GDA9UHW6 222 aaKnown RBP16.53■□□□□ 0.24
C9orf3-204ENST00000424143 PPP1R12BO60237 982 aaPredicted RBP16.53■□□□□ 0.24
C9orf3-204ENST00000424143 AKAP3O75969 853 aa16.53■□□□□ 0.24
C9orf3-204ENST00000424143 EYA4O95677 639 aa16.53■□□□□ 0.24
C9orf3-204ENST00000424143 SPATA31C1P0DKV0 1188 aa16.53■□□□□ 0.24
C9orf3-204ENST00000424143 MMP13P45452 471 aa16.53■□□□□ 0.24
C9orf3-204ENST00000424143 RNASE9P60153 205 aaKnown RBP16.53■□□□□ 0.24
C9orf3-204ENST00000424143 GPSM2P81274 684 aa16.53■□□□□ 0.24
C9orf3-204ENST00000424143 PPP2R5AQ15172 486 aa16.53■□□□□ 0.24
C9orf3-204ENST00000424143 KRT71Q3SY84 523 aa16.53■□□□□ 0.24
C9orf3-204ENST00000424143 ODF2Q5BJF6 829 aa16.53■□□□□ 0.24
C9orf3-204ENST00000424143 DAAM2Q86T65 1068 aa16.53■□□□□ 0.24
C9orf3-204ENST00000424143 FUKQ8N0W3 1084 aa16.53■□□□□ 0.24
C9orf3-204ENST00000424143 LRRC47Q8N1G4 583 aaKnown RBP16.53■□□□□ 0.24
C9orf3-204ENST00000424143 PLCD3Q8N3E9 789 aa16.53■□□□□ 0.24
C9orf3-204ENST00000424143 ZKSCAN4Q969J2 545 aaPredicted RBP16.53■□□□□ 0.24
C9orf3-204ENST00000424143 CHMP6Q96FZ7 201 aa16.53■□□□□ 0.24
C9orf3-204ENST00000424143 AP1M1Q9BXS5 423 aa16.53■□□□□ 0.24
C9orf3-204ENST00000424143 STMN4Q9H169 189 aaPredicted RBP16.53■□□□□ 0.24
C9orf3-204ENST00000424143 SEL1LQ9UBV2 794 aa16.53■□□□□ 0.24
C9orf3-204ENST00000424143 RASAL2Q9UJF2 1139 aa16.53■□□□□ 0.24
C9orf3-204ENST00000424143 DAGLAQ9Y4D2 1042 aa16.53■□□□□ 0.24
C9orf3-204ENST00000424143 ASTN1O14525 1302 aa16.53■□□□□ 0.24
C9orf3-204ENST00000424143 FRMPD4Q14CM0 1322 aa16.53■□□□□ 0.24
C9orf3-204ENST00000424143 NPHP3-ACAD11A0A0J9YXS1 232 aa16.52■□□□□ 0.24
C9orf3-204ENST00000424143 PODXLO00592 558 aa16.52■□□□□ 0.24
C9orf3-204ENST00000424143 TTI1O43156 1089 aa16.52■□□□□ 0.24
C9orf3-204ENST00000424143 BBOX1O75936 387 aa16.52■□□□□ 0.24
C9orf3-204ENST00000424143 PSMC2P35998 433 aaKnown RBP16.52■□□□□ 0.24
C9orf3-204ENST00000424143 DNA2P51530 1060 aa16.52■□□□□ 0.24
C9orf3-204ENST00000424143 MAGOHP61326 146 aaKnown RBP16.52■□□□□ 0.24
C9orf3-204ENST00000424143 NEDD9Q14511 834 aa16.52■□□□□ 0.24
C9orf3-204ENST00000424143 NFIXQ14938 502 aa16.52■□□□□ 0.24
C9orf3-204ENST00000424143 SNCBQ16143 134 aa16.52■□□□□ 0.24
C9orf3-204ENST00000424143 MFSD14BQ5SR56 506 aa16.52■□□□□ 0.24
C9orf3-204ENST00000424143 C6orf118Q5T5N4 469 aa16.52■□□□□ 0.24
C9orf3-204ENST00000424143 DPP8Q6V1X1 898 aaPredicted RBP16.52■□□□□ 0.24
C9orf3-204ENST00000424143 PIGWQ7Z7B1 504 aa16.52■□□□□ 0.24
C9orf3-204ENST00000424143 SFR1Q86XK3 245 aa16.52■□□□□ 0.24
C9orf3-204ENST00000424143 DDX42Q86XP3 938 aaKnown RBP eCLIP16.52■□□□□ 0.24
C9orf3-204ENST00000424143 PARP9Q8IXQ6 854 aa16.52■□□□□ 0.24
C9orf3-204ENST00000424143 MAGOHBQ96A72 148 aaKnown RBP16.52■□□□□ 0.24
C9orf3-204ENST00000424143 ZNF317Q96PQ6 595 aaPredicted RBP16.52■□□□□ 0.24
C9orf3-204ENST00000424143 REEP2Q9BRK0 252 aa16.52■□□□□ 0.24
C9orf3-204ENST00000424143 SERPINB13Q9UIV8 391 aa16.52■□□□□ 0.24
C9orf3-204ENST00000424143 ANKRD62A6NC57 917 aa16.52■□□□□ 0.23
C9orf3-204ENST00000424143 AGTP01019 485 aa16.52■□□□□ 0.23
C9orf3-204ENST00000424143 CYP3A4P08684 503 aa16.52■□□□□ 0.23
C9orf3-204ENST00000424143 ITGA4P13612 1032 aa16.52■□□□□ 0.23
C9orf3-204ENST00000424143 SLC8A1P32418 973 aa16.52■□□□□ 0.23
C9orf3-204ENST00000424143 FLT3P36888 993 aa16.52■□□□□ 0.23
C9orf3-204ENST00000424143 SCTRP47872 440 aa16.52■□□□□ 0.23
C9orf3-204ENST00000424143 CASP5P51878 434 aa16.52■□□□□ 0.23
C9orf3-204ENST00000424143 LMNB2Q03252 620 aa16.52■□□□□ 0.23
C9orf3-204ENST00000424143 KLRC3Q07444 240 aa16.52■□□□□ 0.23
C9orf3-204ENST00000424143 RIPK1Q13546 671 aa16.52■□□□□ 0.23
C9orf3-204ENST00000424143 TNFAIP8L3Q5GJ75 292 aa16.52■□□□□ 0.23
C9orf3-204ENST00000424143 C11orf63Q6NUN7 778 aa16.52■□□□□ 0.23
C9orf3-204ENST00000424143 RHOT2Q8IXI1 618 aa16.52■□□□□ 0.23
C9orf3-204ENST00000424143 U2AF1L4Q8WU68 220 aaKnown RBP16.52■□□□□ 0.23
C9orf3-204ENST00000424143 CTNNBL1Q8WYA6 563 aaPredicted RBP16.52■□□□□ 0.23
C9orf3-204ENST00000424143 GCNT4Q9P109 453 aa16.52■□□□□ 0.23
C9orf3-204ENST00000424143 PCYOX1Q9UHG3 505 aa16.52■□□□□ 0.23
C9orf3-204ENST00000424143 LRRC37AA6NMS7 1700 aa16.51■□□□□ 0.23
C9orf3-204ENST00000424143 CCT8L1PA6NM43 557 aa16.51■□□□□ 0.23
C9orf3-204ENST00000424143 USP17L10C9JJH3 530 aa16.51■□□□□ 0.23
C9orf3-204ENST00000424143 DNM1LO00429 736 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms