RNA–Protein interactions for RNA: ENST00000422080.5

HDLBP-208, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-208ENST00000422080 KCNQ1P51787 676 aa20.01■□□□□ 0.79
HDLBP-208ENST00000422080 CLCN3P51790 818 aa20.01■□□□□ 0.79
HDLBP-208ENST00000422080 TARBP2Q15633 366 aaKnown RBP20.01■□□□□ 0.79
HDLBP-208ENST00000422080 UGCGQ16739 394 aa20.01■□□□□ 0.79
HDLBP-208ENST00000422080 ME3Q16798 604 aa20.01■□□□□ 0.79
HDLBP-208ENST00000422080 LETM2Q2VYF4 491 aa20.01■□□□□ 0.79
HDLBP-208ENST00000422080 XKR3Q5GH77 459 aa20.01■□□□□ 0.79
HDLBP-208ENST00000422080 PPP4R3AQ6IN85 833 aa20.01■□□□□ 0.79
HDLBP-208ENST00000422080 NEK8Q86SG6 692 aa20.01■□□□□ 0.79
HDLBP-208ENST00000422080 BANK1Q8NDB2 785 aa20.01■□□□□ 0.79
HDLBP-208ENST00000422080 FAM20AQ96MK3 541 aa20.01■□□□□ 0.79
HDLBP-208ENST00000422080 OSMRQ99650 979 aa20.01■□□□□ 0.79
HDLBP-208ENST00000422080 RGS18Q9NS28 235 aa20.01■□□□□ 0.79
HDLBP-208ENST00000422080 LRFN2Q9ULH4 789 aa20.01■□□□□ 0.79
HDLBP-208ENST00000422080 DENND3A2RUS2 1198 aa20■□□□□ 0.79
HDLBP-208ENST00000422080 MGEA5O60502 916 aa20■□□□□ 0.79
HDLBP-208ENST00000422080 NLRP11P59045 1033 aaKnown RBP20■□□□□ 0.79
HDLBP-208ENST00000422080 SLC24A5Q71RS6 500 aa20■□□□□ 0.79
HDLBP-208ENST00000422080 FAM228AQ86W67 206 aa20■□□□□ 0.79
HDLBP-208ENST00000422080 NECAB1Q8N987 351 aa20■□□□□ 0.79
HDLBP-208ENST00000422080 GTF3C6Q969F1 213 aa20■□□□□ 0.79
HDLBP-208ENST00000422080 NAP1L4Q99733 375 aaKnown RBP20■□□□□ 0.79
HDLBP-208ENST00000422080 ADAM2Q99965 735 aa20■□□□□ 0.79
HDLBP-208ENST00000422080 ADAMTS10Q9H324 1103 aa20■□□□□ 0.79
HDLBP-208ENST00000422080 UBE2ZQ9H832 354 aaPredicted RBP20■□□□□ 0.79
HDLBP-208ENST00000422080 KCNMB3Q9NPA1 279 aa20■□□□□ 0.79
HDLBP-208ENST00000422080 GJB4Q9NTQ9 266 aa20■□□□□ 0.79
HDLBP-208ENST00000422080 AKT3Q9Y243 479 aa20■□□□□ 0.79
HDLBP-208ENST00000422080 PCDHB7Q9Y5E2 793 aa20■□□□□ 0.79
HDLBP-208ENST00000422080 SLC37A4O43826 429 aa19.99■□□□□ 0.79
HDLBP-208ENST00000422080 STBD1O95210 358 aa19.99■□□□□ 0.79
HDLBP-208ENST00000422080 FDPSP14324 419 aaKnown RBP19.99■□□□□ 0.79
HDLBP-208ENST00000422080 NEK4P51957 841 aa19.99■□□□□ 0.79
HDLBP-208ENST00000422080 FAM189BP81408 668 aa19.99■□□□□ 0.79
HDLBP-208ENST00000422080 CDC42EP1Q00587 391 aa19.99■□□□□ 0.79
HDLBP-208ENST00000422080 TBC1D8BQ0IIM8 1120 aa19.99■□□□□ 0.79
HDLBP-208ENST00000422080 NAALADL2Q58DX5 795 aa19.99■□□□□ 0.79
HDLBP-208ENST00000422080 LRRC71Q8N4P6 559 aa19.99■□□□□ 0.79
HDLBP-208ENST00000422080 OXER1Q8TDS5 423 aa19.99■□□□□ 0.79
HDLBP-208ENST00000422080 PPP1R16BQ96T49 567 aa19.99■□□□□ 0.79
HDLBP-208ENST00000422080 MRPL42Q9Y6G3 142 aaKnown RBP19.99■□□□□ 0.79
HDLBP-208ENST00000422080 TTC3P53804 2025 aa19.98■□□□□ 0.79
HDLBP-208ENST00000422080 SIP14410 1827 aa19.98■□□□□ 0.79
HDLBP-208ENST00000422080 C9IYK1 514 aa19.98■□□□□ 0.79
HDLBP-208ENST00000422080 TBX3O15119 743 aa19.98■□□□□ 0.79
HDLBP-208ENST00000422080 EIF4BP23588 611 aaKnown RBP19.98■□□□□ 0.79
HDLBP-208ENST00000422080 PPP2R5CQ13362 524 aa19.98■□□□□ 0.79
HDLBP-208ENST00000422080 DSC3Q14574 896 aa19.98■□□□□ 0.79
HDLBP-208ENST00000422080 PIK3AP1Q6ZUJ8 805 aa19.98■□□□□ 0.79
HDLBP-208ENST00000422080 P2RX5Q93086 422 aa19.98■□□□□ 0.79
HDLBP-208ENST00000422080 NSUN3Q9H649 340 aaKnown RBP19.98■□□□□ 0.79
HDLBP-208ENST00000422080 COL4A4P53420 1690 aaPredicted RBP19.97■□□□□ 0.79
HDLBP-208ENST00000422080 GRM6O15303 877 aa19.97■□□□□ 0.79
HDLBP-208ENST00000422080 CCNT1O60563 726 aaKnown RBP19.97■□□□□ 0.79
HDLBP-208ENST00000422080 SEC24BO95487 1268 aa19.97■□□□□ 0.79
HDLBP-208ENST00000422080 KRT2P35908 639 aa19.97■□□□□ 0.79
HDLBP-208ENST00000422080 PSMC5P62195 406 aa19.97■□□□□ 0.79
HDLBP-208ENST00000422080 LEXMQ3ZCV2 418 aa19.97■□□□□ 0.79
HDLBP-208ENST00000422080 TCEAL5Q5H9L2 206 aa19.97■□□□□ 0.79
HDLBP-208ENST00000422080 CEP89Q96ST8 783 aa19.97■□□□□ 0.79
HDLBP-208ENST00000422080 ELAC1Q9H777 363 aaKnown RBP19.97■□□□□ 0.79
HDLBP-208ENST00000422080 BRMS1Q9HCU9 246 aa19.97■□□□□ 0.79
HDLBP-208ENST00000422080 SEPT9Q9UHD8 586 aaPredicted RBP19.97■□□□□ 0.79
HDLBP-208ENST00000422080 VAV3Q9UKW4 847 aa19.97■□□□□ 0.79
HDLBP-208ENST00000422080 PLAGL2Q9UPG8 496 aa19.97■□□□□ 0.79
HDLBP-208ENST00000422080 IGKV6-21A0A0C4DH24 114 aa19.96■□□□□ 0.79
HDLBP-208ENST00000422080 DDX11L8A8MPP1 907 aa19.96■□□□□ 0.79
HDLBP-208ENST00000422080 NCK2O43639 380 aa19.96■□□□□ 0.79
HDLBP-208ENST00000422080 DKC1O60832 514 aaKnown RBP eCLIP19.96■□□□□ 0.79
HDLBP-208ENST00000422080 DTNBO60941 627 aa19.96■□□□□ 0.79
HDLBP-208ENST00000422080 LARGE1O95461 756 aa19.96■□□□□ 0.79
HDLBP-208ENST00000422080 GPC3P51654 580 aa19.96■□□□□ 0.79
HDLBP-208ENST00000422080 COL19A1Q14993 1142 aa19.96■□□□□ 0.79
HDLBP-208ENST00000422080 MTERF2Q49AM1 385 aa19.96■□□□□ 0.79
HDLBP-208ENST00000422080 PAN2Q504Q3 1202 aaKnown RBP19.96■□□□□ 0.79
HDLBP-208ENST00000422080 NSUN7Q8NE18 718 aaKnown RBP19.96■□□□□ 0.79
HDLBP-208ENST00000422080 NECAB3Q96P71 396 aaPredicted RBP19.96■□□□□ 0.79
HDLBP-208ENST00000422080 MUC3AQ02505 3323 aa19.96■□□□□ 0.79
HDLBP-208ENST00000422080 EML1O00423 815 aa19.95■□□□□ 0.78
HDLBP-208ENST00000422080 DARSP14868 501 aaKnown RBP19.95■□□□□ 0.78
HDLBP-208ENST00000422080 QARSP47897 775 aaKnown RBP19.95■□□□□ 0.78
HDLBP-208ENST00000422080 GATMP50440 423 aa19.95■□□□□ 0.78
HDLBP-208ENST00000422080 DNM2P50570 870 aa19.95■□□□□ 0.78
HDLBP-208ENST00000422080 EARS2Q5JPH6 523 aaKnown RBP19.95■□□□□ 0.78
HDLBP-208ENST00000422080 HAS1Q92839 578 aa19.95■□□□□ 0.78
HDLBP-208ENST00000422080 TNFRSF25Q93038 417 aa19.95■□□□□ 0.78
HDLBP-208ENST00000422080 PABPC5Q96DU9 382 aaKnown RBP19.95■□□□□ 0.78
HDLBP-208ENST00000422080 JPH2Q9BR39 696 aaPredicted RBP19.95■□□□□ 0.78
HDLBP-208ENST00000422080 ATP6V0A4Q9HBG4 840 aa19.95■□□□□ 0.78
HDLBP-208ENST00000422080 TMEM161AQ9NX61 479 aa19.95■□□□□ 0.78
HDLBP-208ENST00000422080 MARCH6O60337 910 aa19.94■□□□□ 0.78
HDLBP-208ENST00000422080 MAFO75444 373 aaPredicted RBP19.94■□□□□ 0.78
HDLBP-208ENST00000422080 MMP1P03956 469 aa19.94■□□□□ 0.78
HDLBP-208ENST00000422080 P4HBP07237 508 aaKnown RBP19.94■□□□□ 0.78
HDLBP-208ENST00000422080 ZSCAN20P17040 1043 aaPredicted RBP19.94■□□□□ 0.78
HDLBP-208ENST00000422080 IBSPP21815 317 aaPredicted RBP19.94■□□□□ 0.78
HDLBP-208ENST00000422080 KCNA5P22460 613 aa19.94■□□□□ 0.78
HDLBP-208ENST00000422080 NR5A1Q13285 461 aa19.94■□□□□ 0.78
HDLBP-208ENST00000422080 EPHA7Q15375 998 aa19.94■□□□□ 0.78
HDLBP-208ENST00000422080 PUS10Q3MIT2 529 aaKnown RBP19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms