RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 RNF146Q9NTX7 359 aa8.08□□□□□ -1.12
HMGN1-205ENST00000419378 FBXO40Q9UH90 709 aa8.08□□□□□ -1.12
HMGN1-205ENST00000419378 OGDHLQ9ULD0 1010 aa8.08□□□□□ -1.12
HMGN1-205ENST00000419378 DIS3Q9Y2L1 958 aaKnown RBP8.08□□□□□ -1.12
HMGN1-205ENST00000419378 PCDHGB7Q9Y5F8 929 aa8.08□□□□□ -1.12
HMGN1-205ENST00000419378 E7EWF7 191 aa8.07□□□□□ -1.12
HMGN1-205ENST00000419378 ENC1O14682 589 aa8.07□□□□□ -1.12
HMGN1-205ENST00000419378 MSCO60682 206 aa8.07□□□□□ -1.12
HMGN1-205ENST00000419378 ICAM1P05362 532 aa8.07□□□□□ -1.12
HMGN1-205ENST00000419378 TAL1P17542 331 aaPredicted RBP8.07□□□□□ -1.12
HMGN1-205ENST00000419378 CNGA1P29973 690 aa8.07□□□□□ -1.12
HMGN1-205ENST00000419378 SEC23AQ15436 765 aa8.07□□□□□ -1.12
HMGN1-205ENST00000419378 TKFCQ3LXA3 575 aa8.07□□□□□ -1.12
HMGN1-205ENST00000419378 PRAMEF19Q5SWL8 479 aa8.07□□□□□ -1.12
HMGN1-205ENST00000419378 GPATCH4Q5T3I0 446 aaKnown RBP8.07□□□□□ -1.12
HMGN1-205ENST00000419378 IFIT1BQ5T764 474 aaKnown RBP8.07□□□□□ -1.12
HMGN1-205ENST00000419378 KIAA1211Q6ZU35 1233 aa8.07□□□□□ -1.12
HMGN1-205ENST00000419378 ERMP1Q7Z2K6 904 aa8.07□□□□□ -1.12
HMGN1-205ENST00000419378 RALYLQ86SE5 291 aaKnown RBP8.07□□□□□ -1.12
HMGN1-205ENST00000419378 CACTIN-AS1Q8N1I8 211 aa8.07□□□□□ -1.12
HMGN1-205ENST00000419378 ANKRD35Q8N283 1001 aa8.07□□□□□ -1.12
HMGN1-205ENST00000419378 DDX11Q96FC9 970 aa8.07□□□□□ -1.12
HMGN1-205ENST00000419378 PAWRQ96IZ0 340 aaKnown RBP8.07□□□□□ -1.12
HMGN1-205ENST00000419378 FGD4Q96M96 766 aa8.07□□□□□ -1.12
HMGN1-205ENST00000419378 NECAB3Q96P71 396 aaPredicted RBP8.07□□□□□ -1.12
HMGN1-205ENST00000419378 TINF2Q9BSI4 451 aa8.07□□□□□ -1.12
HMGN1-205ENST00000419378 DDX20Q9UHI6 824 aaKnown RBP8.07□□□□□ -1.12
HMGN1-205ENST00000419378 CCPG1Q9ULG6 757 aa8.07□□□□□ -1.12
HMGN1-205ENST00000419378 PFASO15067 1338 aa8.06□□□□□ -1.12
HMGN1-205ENST00000419378 LAMA3Q16787 3333 aa8.06□□□□□ -1.12
HMGN1-205ENST00000419378 SEPT4O43236 478 aa8.06□□□□□ -1.12
HMGN1-205ENST00000419378 CDC45O75419 566 aa8.06□□□□□ -1.12
HMGN1-205ENST00000419378 CENPBP07199 599 aaPredicted RBP8.06□□□□□ -1.12
HMGN1-205ENST00000419378 ESRRAP11474 423 aaPredicted RBP8.06□□□□□ -1.12
HMGN1-205ENST00000419378 ALAS1P13196 640 aa8.06□□□□□ -1.12
HMGN1-205ENST00000419378 IKBKEQ14164 716 aa8.06□□□□□ -1.12
HMGN1-205ENST00000419378 ASPRV1Q53RT3 343 aa8.06□□□□□ -1.12
HMGN1-205ENST00000419378 MUM1L1Q5H9M0 696 aa8.06□□□□□ -1.12
HMGN1-205ENST00000419378 TXNDC11Q6PKC3 985 aa8.06□□□□□ -1.12
HMGN1-205ENST00000419378 NECAB2Q7Z6G3 386 aa8.06□□□□□ -1.12
HMGN1-205ENST00000419378 MB21D2Q8IYB1 491 aaPredicted RBP8.06□□□□□ -1.12
HMGN1-205ENST00000419378 NCOA7Q8NI08 942 aa8.06□□□□□ -1.12
HMGN1-205ENST00000419378 HTATIP2Q9BUP3 242 aa8.06□□□□□ -1.12
HMGN1-205ENST00000419378 CPVLQ9H3G5 476 aa8.06□□□□□ -1.12
HMGN1-205ENST00000419378 A1CFQ9NQ94 594 aaKnown RBP8.06□□□□□ -1.12
HMGN1-205ENST00000419378 TMEM39AQ9NV64 488 aa8.06□□□□□ -1.12
HMGN1-205ENST00000419378 KBTBD4Q9NVX7 518 aa8.06□□□□□ -1.12
HMGN1-205ENST00000419378 NRBP1Q9UHY1 535 aa8.06□□□□□ -1.12
HMGN1-205ENST00000419378 DDX41Q9UJV9 622 aaKnown RBP8.06□□□□□ -1.12
HMGN1-205ENST00000419378 PPME1Q9Y570 386 aa8.06□□□□□ -1.12
HMGN1-205ENST00000419378 WDR19Q8NEZ3 1342 aa8.05□□□□□ -1.12
HMGN1-205ENST00000419378 SYNGAP1Q96PV0 1343 aa8.05□□□□□ -1.12
HMGN1-205ENST00000419378 LCTP09848 1927 aa8.05□□□□□ -1.12
HMGN1-205ENST00000419378 ALPK3Q96L96 1907 aa8.05□□□□□ -1.12
HMGN1-205ENST00000419378 SMCHD1A6NHR9 2005 aa8.05□□□□□ -1.12
HMGN1-205ENST00000419378 H3BRJ5 948 aa8.05□□□□□ -1.12
HMGN1-205ENST00000419378 IFIT3O14879 490 aaKnown RBP8.05□□□□□ -1.12
HMGN1-205ENST00000419378 SLC27A2O14975 620 aa8.05□□□□□ -1.12
HMGN1-205ENST00000419378 PAGE1O75459 146 aa8.05□□□□□ -1.12
HMGN1-205ENST00000419378 SNAI1O95863 264 aaPredicted RBP8.05□□□□□ -1.12
HMGN1-205ENST00000419378 B3GALT4O96024 378 aa8.05□□□□□ -1.12
HMGN1-205ENST00000419378 PARP1P09874 1014 aaKnown RBP8.05□□□□□ -1.12
HMGN1-205ENST00000419378 ZNF865P0CJ78 1059 aaPredicted RBP8.05□□□□□ -1.12
HMGN1-205ENST00000419378 COL6A1P12109 1028 aa8.05□□□□□ -1.12
HMGN1-205ENST00000419378 ANTXR2P58335 489 aa8.05□□□□□ -1.12
HMGN1-205ENST00000419378 RACK1P63244 317 aaKnown RBP8.05□□□□□ -1.12
HMGN1-205ENST00000419378 LCE2AQ5TA79 106 aaPredicted RBP8.05□□□□□ -1.12
HMGN1-205ENST00000419378 ANO1Q5XXA6 986 aa8.05□□□□□ -1.12
HMGN1-205ENST00000419378 ZNF385CQ66K41 422 aaPredicted RBP8.05□□□□□ -1.12
HMGN1-205ENST00000419378 CREB3L3Q68CJ9 461 aa8.05□□□□□ -1.12
HMGN1-205ENST00000419378 HGSNATQ68CP4 663 aa8.05□□□□□ -1.12
HMGN1-205ENST00000419378 CASC1Q6TDU7 716 aa8.05□□□□□ -1.12
HMGN1-205ENST00000419378 MAMDC4Q6UXC1 1216 aa8.05□□□□□ -1.12
HMGN1-205ENST00000419378 CHST3Q7LGC8 479 aa8.05□□□□□ -1.12
HMGN1-205ENST00000419378 WFDC8Q8IUA0 241 aa8.05□□□□□ -1.12
HMGN1-205ENST00000419378 MSL3Q8N5Y2 521 aaKnown RBP8.05□□□□□ -1.12
HMGN1-205ENST00000419378 FAM133AQ8N9E0 248 aa8.05□□□□□ -1.12
HMGN1-205ENST00000419378 DPF3Q92784 378 aa8.05□□□□□ -1.12
HMGN1-205ENST00000419378 TGIF2Q9GZN2 237 aa8.05□□□□□ -1.12
HMGN1-205ENST00000419378 UBA5Q9GZZ9 404 aa8.05□□□□□ -1.12
HMGN1-205ENST00000419378 C11orf49Q9H6J7 331 aa8.05□□□□□ -1.12
HMGN1-205ENST00000419378 CCSER2Q9H7U1 834 aa8.05□□□□□ -1.12
HMGN1-205ENST00000419378 CYP39A1Q9NYL5 469 aa8.05□□□□□ -1.12
HMGN1-205ENST00000419378 CNPY2Q9Y2B0 182 aa8.05□□□□□ -1.12
HMGN1-205ENST00000419378 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.05□□□□□ -1.12
HMGN1-205ENST00000419378 LRRC37A2A6NM11 1700 aa8.05□□□□□ -1.12
HMGN1-205ENST00000419378 MCM3APO60318 1980 aa8.04□□□□□ -1.12
HMGN1-205ENST00000419378 ERICH2A1L162 156 aa8.04□□□□□ -1.12
HMGN1-205ENST00000419378 LINC01387J3KSC0 135 aa8.04□□□□□ -1.12
HMGN1-205ENST00000419378 DNM1LO00429 736 aa8.04□□□□□ -1.12
HMGN1-205ENST00000419378 SOX1O00570 391 aaPredicted RBP8.04□□□□□ -1.12
HMGN1-205ENST00000419378 NFIBO00712 420 aa8.04□□□□□ -1.12
HMGN1-205ENST00000419378 DHX16O60231 1041 aaKnown RBP8.04□□□□□ -1.12
HMGN1-205ENST00000419378 AKR1A1P14550 325 aa8.04□□□□□ -1.12
HMGN1-205ENST00000419378 CNTN2Q02246 1040 aa8.04□□□□□ -1.12
HMGN1-205ENST00000419378 PPP2R3AQ06190 1150 aa8.04□□□□□ -1.12
HMGN1-205ENST00000419378 WTAPQ15007 396 aa8.04□□□□□ -1.12
HMGN1-205ENST00000419378 SART3Q15020 963 aaKnown RBP8.04□□□□□ -1.12
HMGN1-205ENST00000419378 NECTIN1Q15223 517 aa8.04□□□□□ -1.12
HMGN1-205ENST00000419378 CDC37Q16543 378 aaPredicted RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms