RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 ARMCX5Q6P1M9 558 aa11.05□□□□□ -0.64
DDB1-202ENST00000414411 PLPPR4Q7Z2D5 763 aa11.05□□□□□ -0.64
DDB1-202ENST00000414411 TPH2Q8IWU9 490 aa11.05□□□□□ -0.64
DDB1-202ENST00000414411 C4orf19Q8IY42 314 aa11.05□□□□□ -0.64
DDB1-202ENST00000414411 PIP4P2Q8N4L2 257 aa11.05□□□□□ -0.64
DDB1-202ENST00000414411 MLKLQ8NB16 471 aa11.05□□□□□ -0.64
DDB1-202ENST00000414411 MAP7D2Q96T17 732 aa11.05□□□□□ -0.64
DDB1-202ENST00000414411 LXNQ9BS40 222 aa11.05□□□□□ -0.64
DDB1-202ENST00000414411 RNF208Q9H0X6 261 aa11.05□□□□□ -0.64
DDB1-202ENST00000414411 ZNF302Q9NR11 478 aa11.05□□□□□ -0.64
DDB1-202ENST00000414411 GABBR1Q9UBS5 961 aa11.05□□□□□ -0.64
DDB1-202ENST00000414411 KIAA1024Q9UPX6 916 aa11.05□□□□□ -0.64
DDB1-202ENST00000414411 IGSF9BQ9UPX0 1349 aa11.05□□□□□ -0.64
DDB1-202ENST00000414411 POTEB3A0JP26 581 aa11.05□□□□□ -0.64
DDB1-202ENST00000414411 LGALS2P05162 132 aa11.05□□□□□ -0.64
DDB1-202ENST00000414411 SFPQP23246 707 aaKnown RBP eCLIP11.05□□□□□ -0.64
DDB1-202ENST00000414411 TXLNAP40222 546 aa11.05□□□□□ -0.64
DDB1-202ENST00000414411 UBASH3AP57075 661 aa11.05□□□□□ -0.64
DDB1-202ENST00000414411 PSMC6P62333 389 aa11.05□□□□□ -0.64
DDB1-202ENST00000414411 BRDTQ58F21 947 aaPredicted RBP11.05□□□□□ -0.64
DDB1-202ENST00000414411 POTEBQ6S5H4 581 aa11.05□□□□□ -0.64
DDB1-202ENST00000414411 NYAP1Q6ZVC0 841 aa11.05□□□□□ -0.64
DDB1-202ENST00000414411 KCNK18Q7Z418 384 aa11.05□□□□□ -0.64
DDB1-202ENST00000414411 MTERF4Q7Z6M4 381 aaKnown RBP11.05□□□□□ -0.64
DDB1-202ENST00000414411 GRAMD1CQ8IYS0 662 aa11.05□□□□□ -0.64
DDB1-202ENST00000414411 CCAR2Q8N163 923 aaKnown RBP11.05□□□□□ -0.64
DDB1-202ENST00000414411 KAT2BQ92831 832 aa11.05□□□□□ -0.64
DDB1-202ENST00000414411 CALML4Q96GE6 196 aa11.05□□□□□ -0.64
DDB1-202ENST00000414411 MCOLN1Q9GZU1 580 aa11.05□□□□□ -0.64
DDB1-202ENST00000414411 NT5C3AQ9H0P0 336 aa11.05□□□□□ -0.64
DDB1-202ENST00000414411 SMARCAD1Q9H4L7 1026 aa11.05□□□□□ -0.64
DDB1-202ENST00000414411 SPC25Q9HBM1 224 aa11.05□□□□□ -0.64
DDB1-202ENST00000414411 BLOC1S4Q9NUP1 217 aa11.05□□□□□ -0.64
DDB1-202ENST00000414411 FANCLQ9NW38 375 aa11.05□□□□□ -0.64
DDB1-202ENST00000414411 DACH1Q9UI36 760 aa11.05□□□□□ -0.64
DDB1-202ENST00000414411 FRMPD3Q5JV73 1810 aa11.05□□□□□ -0.64
DDB1-202ENST00000414411 BACH1O14867 736 aa11.04□□□□□ -0.64
DDB1-202ENST00000414411 ZBTB39O15060 712 aa11.04□□□□□ -0.64
DDB1-202ENST00000414411 SERPINC1P01008 464 aa11.04□□□□□ -0.64
DDB1-202ENST00000414411 SLFN14P0C7P3 912 aa11.04□□□□□ -0.64
DDB1-202ENST00000414411 PLCG1P19174 1290 aa11.04□□□□□ -0.64
DDB1-202ENST00000414411 KCNJ6P48051 423 aa11.04□□□□□ -0.64
DDB1-202ENST00000414411 SLC26A2P50443 739 aa11.04□□□□□ -0.64
DDB1-202ENST00000414411 LRRC41Q15345 812 aa11.04□□□□□ -0.64
DDB1-202ENST00000414411 FAM160B1Q5W0V3 765 aa11.04□□□□□ -0.64
DDB1-202ENST00000414411 POTEGQ6S5H5 508 aa11.04□□□□□ -0.64
DDB1-202ENST00000414411 TRIM50Q86XT4 487 aa11.04□□□□□ -0.64
DDB1-202ENST00000414411 TSC1Q92574 1164 aa11.04□□□□□ -0.64
DDB1-202ENST00000414411 ATP6V0A1Q93050 837 aa11.04□□□□□ -0.64
DDB1-202ENST00000414411 DHX58Q96C10 678 aa11.04□□□□□ -0.64
DDB1-202ENST00000414411 CCDC34Q96HJ3 373 aa11.04□□□□□ -0.64
DDB1-202ENST00000414411 DEFB118Q96PH6 123 aa11.04□□□□□ -0.64
DDB1-202ENST00000414411 NACC1Q96RE7 527 aa11.04□□□□□ -0.64
DDB1-202ENST00000414411 PLIN2Q99541 437 aa11.04□□□□□ -0.64
DDB1-202ENST00000414411 AZI2Q9H6S1 392 aa11.04□□□□□ -0.64
DDB1-202ENST00000414411 OGDHLQ9ULD0 1010 aa11.04□□□□□ -0.64
DDB1-202ENST00000414411 PAXBP1Q9Y5B6 917 aa11.04□□□□□ -0.64
DDB1-202ENST00000414411 KDM3AQ9Y4C1 1321 aa11.04□□□□□ -0.64
DDB1-202ENST00000414411 SCN10AQ9Y5Y9 1956 aa11.04□□□□□ -0.64
DDB1-202ENST00000414411 H3BRB1 525 aa11.03□□□□□ -0.64
DDB1-202ENST00000414411 CTIFO43310 598 aaKnown RBP11.03□□□□□ -0.64
DDB1-202ENST00000414411 KPNA6O60684 536 aa11.03□□□□□ -0.64
DDB1-202ENST00000414411 F2P00734 622 aa11.03□□□□□ -0.64
DDB1-202ENST00000414411 MYCP01106 439 aaPredicted RBP11.03□□□□□ -0.64
DDB1-202ENST00000414411 GJB1P08034 283 aa11.03□□□□□ -0.64
DDB1-202ENST00000414411 PURAQ00577 322 aaKnown RBP11.03□□□□□ -0.64
DDB1-202ENST00000414411 UTP14CQ5TAP6 766 aaKnown RBP11.03□□□□□ -0.64
DDB1-202ENST00000414411 RRAGBQ5VZM2 374 aa11.03□□□□□ -0.64
DDB1-202ENST00000414411 PDXDC2PQ6P474 469 aa11.03□□□□□ -0.64
DDB1-202ENST00000414411 CHRDL2Q6WN34 429 aa11.03□□□□□ -0.64
DDB1-202ENST00000414411 ANO5Q75V66 913 aa11.03□□□□□ -0.64
DDB1-202ENST00000414411 SH3RF1Q7Z6J0 888 aa11.03□□□□□ -0.64
DDB1-202ENST00000414411 VSTM4Q8IW00 320 aa11.03□□□□□ -0.64
DDB1-202ENST00000414411 IQUBQ8NA54 791 aa11.03□□□□□ -0.64
DDB1-202ENST00000414411 ENOX1Q8TC92 643 aaKnown RBP11.03□□□□□ -0.64
DDB1-202ENST00000414411 GLG1Q92896 1179 aa11.03□□□□□ -0.64
DDB1-202ENST00000414411 CRISPLD2Q9H0B8 497 aa11.03□□□□□ -0.64
DDB1-202ENST00000414411 RNPEPQ9H4A4 650 aa11.03□□□□□ -0.64
DDB1-202ENST00000414411 TUT1Q9H6E5 874 aaKnown RBP11.03□□□□□ -0.64
DDB1-202ENST00000414411 RYDENQ9NUL5 291 aaKnown RBP11.03□□□□□ -0.64
DDB1-202ENST00000414411 ERAP1Q9NZ08 941 aa11.03□□□□□ -0.64
DDB1-202ENST00000414411 MKI67P46013 3256 aaKnown RBP11.03□□□□□ -0.64
DDB1-202ENST00000414411 E9PMD0 336 aa11.03□□□□□ -0.64
DDB1-202ENST00000414411 HAS3O00219 553 aa11.03□□□□□ -0.64
DDB1-202ENST00000414411 MAP3K13O43283 966 aa11.03□□□□□ -0.64
DDB1-202ENST00000414411 DKC1O60832 514 aaKnown RBP eCLIP11.03□□□□□ -0.64
DDB1-202ENST00000414411 CLSTN1O94985 981 aa11.03□□□□□ -0.64
DDB1-202ENST00000414411 ZNF286BP0CG31 522 aa11.03□□□□□ -0.64
DDB1-202ENST00000414411 ZNF18P17022 549 aa11.03□□□□□ -0.64
DDB1-202ENST00000414411 PRKCEQ02156 737 aa11.03□□□□□ -0.64
DDB1-202ENST00000414411 PLCB4Q15147 1175 aa11.03□□□□□ -0.64
DDB1-202ENST00000414411 PTPN14Q15678 1187 aa11.03□□□□□ -0.64
DDB1-202ENST00000414411 KCNA10Q16322 511 aa11.03□□□□□ -0.64
DDB1-202ENST00000414411 XKR3Q5GH77 459 aa11.03□□□□□ -0.64
DDB1-202ENST00000414411 CEP135Q66GS9 1140 aa11.03□□□□□ -0.64
DDB1-202ENST00000414411 RNF180Q86T96 592 aa11.03□□□□□ -0.64
DDB1-202ENST00000414411 ZNF710Q8N1W2 664 aa11.03□□□□□ -0.64
DDB1-202ENST00000414411 PCSK9Q8NBP7 692 aaKnown RBP11.03□□□□□ -0.64
DDB1-202ENST00000414411 CDK5RAP3Q96JB5 506 aa11.03□□□□□ -0.64
DDB1-202ENST00000414411 PYM1Q9BRP8 204 aaKnown RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms