RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 NME9Q86XW9 330 aa3.49□□□□□ -1.85
RNU6-1140P-201ENST00000410517 CPNE8Q86YQ8 564 aa3.49□□□□□ -1.85
RNU6-1140P-201ENST00000410517 Q8N1Y9 231 aa3.49□□□□□ -1.85
RNU6-1140P-201ENST00000410517 TTLL6Q8N841 843 aa3.49□□□□□ -1.85
RNU6-1140P-201ENST00000410517 RCBTB1Q8NDN9 531 aa3.49□□□□□ -1.85
RNU6-1140P-201ENST00000410517 SLC7A14Q8TBB6 771 aa3.49□□□□□ -1.85
RNU6-1140P-201ENST00000410517 YIPF4Q9BSR8 244 aa3.49□□□□□ -1.85
RNU6-1140P-201ENST00000410517 LGR4Q9BXB1 951 aa3.49□□□□□ -1.85
RNU6-1140P-201ENST00000410517 PCDH18Q9HCL0 1135 aa3.49□□□□□ -1.85
RNU6-1140P-201ENST00000410517 BTG4Q9NY30 223 aa3.49□□□□□ -1.85
RNU6-1140P-201ENST00000410517 TCEAL9Q9UHQ7 104 aa3.49□□□□□ -1.85
RNU6-1140P-201ENST00000410517 KCNG1Q9UIX4 513 aa3.49□□□□□ -1.85
RNU6-1140P-201ENST00000410517 SPEF1Q9Y4P9 236 aa3.49□□□□□ -1.85
RNU6-1140P-201ENST00000410517 PCDHA9Q9Y5H5 950 aa3.49□□□□□ -1.85
RNU6-1140P-201ENST00000410517 PCDHA8Q9Y5H6 950 aa3.49□□□□□ -1.85
RNU6-1140P-201ENST00000410517 CEP170Q5SW79 1584 aa3.49□□□□□ -1.85
RNU6-1140P-201ENST00000410517 LMTK3Q96Q04 1460 aa3.48□□□□□ -1.85
RNU6-1140P-201ENST00000410517 WASHC2AQ641Q2 1341 aa3.48□□□□□ -1.85
RNU6-1140P-201ENST00000410517 A0A087X0B3 334 aa3.48□□□□□ -1.85
RNU6-1140P-201ENST00000410517 E2F8A0AVK6 867 aa3.48□□□□□ -1.85
RNU6-1140P-201ENST00000410517 BLACEA4D250 179 aa3.48□□□□□ -1.85
RNU6-1140P-201ENST00000410517 C22orf46C9J442 243 aa3.48□□□□□ -1.85
RNU6-1140P-201ENST00000410517 M0R2C6 588 aa3.48□□□□□ -1.85
RNU6-1140P-201ENST00000410517 RASGRP1O95267 797 aa3.48□□□□□ -1.85
RNU6-1140P-201ENST00000410517 ERBB2P04626 1255 aa3.48□□□□□ -1.85
RNU6-1140P-201ENST00000410517 SRGAP2CP0DJJ0 459 aa3.48□□□□□ -1.85
RNU6-1140P-201ENST00000410517 U2AF1L5P0DN76 240 aaPredicted RBP3.48□□□□□ -1.85
RNU6-1140P-201ENST00000410517 PYGMP11217 842 aa3.48□□□□□ -1.85
RNU6-1140P-201ENST00000410517 BCL6P41182 706 aa3.48□□□□□ -1.85
RNU6-1140P-201ENST00000410517 LSSP48449 732 aa3.48□□□□□ -1.85
RNU6-1140P-201ENST00000410517 U2AF1Q01081 240 aaKnown RBP eCLIP3.48□□□□□ -1.85
RNU6-1140P-201ENST00000410517 SF1Q15637 639 aaKnown RBP3.48□□□□□ -1.85
RNU6-1140P-201ENST00000410517 CCDC142Q17RM4 750 aa3.48□□□□□ -1.85
RNU6-1140P-201ENST00000410517 TMEM177Q53S58 311 aa3.48□□□□□ -1.85
RNU6-1140P-201ENST00000410517 PRAMEF18Q5VWM3 479 aa3.48□□□□□ -1.85
RNU6-1140P-201ENST00000410517 IQSEC1Q6DN90 963 aa3.48□□□□□ -1.85
RNU6-1140P-201ENST00000410517 KCNT2Q6UVM3 1135 aa3.48□□□□□ -1.85
RNU6-1140P-201ENST00000410517 RNF180Q86T96 592 aa3.48□□□□□ -1.85
RNU6-1140P-201ENST00000410517 ZC3H18Q86VM9 953 aaKnown RBP3.48□□□□□ -1.85
RNU6-1140P-201ENST00000410517 LDLRAD3Q86YD5 345 aa3.48□□□□□ -1.85
RNU6-1140P-201ENST00000410517 KBTBD2Q8IY47 623 aa3.48□□□□□ -1.85
RNU6-1140P-201ENST00000410517 WDR66Q8TBY9 1149 aa3.48□□□□□ -1.85
RNU6-1140P-201ENST00000410517 ADOQ96SZ5 270 aa3.48□□□□□ -1.85
RNU6-1140P-201ENST00000410517 AGAP2Q99490 1192 aa3.48□□□□□ -1.85
RNU6-1140P-201ENST00000410517 MCMBPQ9BTE3 642 aa3.48□□□□□ -1.85
RNU6-1140P-201ENST00000410517 PUS7LQ9H0K6 701 aaKnown RBP3.48□□□□□ -1.85
RNU6-1140P-201ENST00000410517 B4GALT6Q9UBX8 382 aa3.48□□□□□ -1.85
RNU6-1140P-201ENST00000410517 ZNF652Q9Y2D9 606 aa3.48□□□□□ -1.85
RNU6-1140P-201ENST00000410517 X6R8D5 127 aa3.48□□□□□ -1.85
RNU6-1140P-201ENST00000410517 KIAA0586Q9BVV6 1533 aa3.48□□□□□ -1.85
RNU6-1140P-201ENST00000410517 SHROOM2Q13796 1616 aa3.48□□□□□ -1.85
RNU6-1140P-201ENST00000410517 PTPRGP23470 1445 aa3.47□□□□□ -1.85
RNU6-1140P-201ENST00000410517 CBX4O00257 560 aa3.47□□□□□ -1.85
RNU6-1140P-201ENST00000410517 HGSO14964 777 aaPredicted RBP3.47□□□□□ -1.85
RNU6-1140P-201ENST00000410517 B4GALT4O60513 344 aa3.47□□□□□ -1.85
RNU6-1140P-201ENST00000410517 F2P00734 622 aa3.47□□□□□ -1.85
RNU6-1140P-201ENST00000410517 FUCA1P04066 466 aa3.47□□□□□ -1.85
RNU6-1140P-201ENST00000410517 CYP17A1P05093 508 aa3.47□□□□□ -1.85
RNU6-1140P-201ENST00000410517 SESN3P58005 492 aa3.47□□□□□ -1.85
RNU6-1140P-201ENST00000410517 ADCY1Q08828 1119 aa3.47□□□□□ -1.85
RNU6-1140P-201ENST00000410517 STRN3Q13033 797 aa3.47□□□□□ -1.85
RNU6-1140P-201ENST00000410517 C21orf62-AS1Q17RA5 79 aa3.47□□□□□ -1.85
RNU6-1140P-201ENST00000410517 HSP90AB2PQ58FF8 381 aa3.47□□□□□ -1.85
RNU6-1140P-201ENST00000410517 PRR31Q5SQ13 230 aa3.47□□□□□ -1.85
RNU6-1140P-201ENST00000410517 STEAP3Q658P3 488 aa3.47□□□□□ -1.85
RNU6-1140P-201ENST00000410517 PKN3Q6P5Z2 889 aa3.47□□□□□ -1.85
RNU6-1140P-201ENST00000410517 OTOP3Q7RTS5 596 aa3.47□□□□□ -1.85
RNU6-1140P-201ENST00000410517 FGD2Q7Z6J4 655 aa3.47□□□□□ -1.85
RNU6-1140P-201ENST00000410517 MRGPRGQ86SM5 289 aa3.47□□□□□ -1.85
RNU6-1140P-201ENST00000410517 AFAP1L2Q8N4X5 818 aa3.47□□□□□ -1.85
RNU6-1140P-201ENST00000410517 EFHBQ8N7U6 833 aa3.47□□□□□ -1.85
RNU6-1140P-201ENST00000410517 IGSF22Q8N9C0 903 aa3.47□□□□□ -1.85
RNU6-1140P-201ENST00000410517 WDR48Q8TAF3 677 aa3.47□□□□□ -1.85
RNU6-1140P-201ENST00000410517 EXTL1Q92935 676 aa3.47□□□□□ -1.85
RNU6-1140P-201ENST00000410517 CLUHP3Q96NS8 147 aa3.47□□□□□ -1.85
RNU6-1140P-201ENST00000410517 WRNIP1Q96S55 665 aa3.47□□□□□ -1.85
RNU6-1140P-201ENST00000410517 SMOC1Q9H4F8 434 aa3.47□□□□□ -1.85
RNU6-1140P-201ENST00000410517 IPPKQ9H8X2 491 aa3.47□□□□□ -1.85
RNU6-1140P-201ENST00000410517 SLC6A20Q9NP91 592 aa3.47□□□□□ -1.85
RNU6-1140P-201ENST00000410517 ACSS2Q9NR19 701 aa3.47□□□□□ -1.85
RNU6-1140P-201ENST00000410517 USP36Q9P275 1121 aaKnown RBP3.47□□□□□ -1.85
RNU6-1140P-201ENST00000410517 GULP1Q9UBP9 304 aa3.47□□□□□ -1.85
RNU6-1140P-201ENST00000410517 DSEQ9UL01 958 aa3.47□□□□□ -1.85
RNU6-1140P-201ENST00000410517 DMRT1Q9Y5R6 373 aa3.47□□□□□ -1.85
RNU6-1140P-201ENST00000410517 ATP23Q9Y6H3 246 aa3.47□□□□□ -1.85
RNU6-1140P-201ENST00000410517 TNIKQ9UKE5 1360 aa3.47□□□□□ -1.85
RNU6-1140P-201ENST00000410517 UHRF1BP1LA0JNW5 1464 aa3.47□□□□□ -1.85
RNU6-1140P-201ENST00000410517 ADGRL1O94910 1474 aa3.47□□□□□ -1.85
RNU6-1140P-201ENST00000410517 GLI2P10070 1586 aa3.46□□□□□ -1.85
RNU6-1140P-201ENST00000410517 DIP2BQ9P265 1576 aa3.46□□□□□ -1.85
RNU6-1140P-201ENST00000410517 ABCC2Q92887 1545 aa3.46□□□□□ -1.86
RNU6-1140P-201ENST00000410517 CLASP2O75122 1294 aaKnown RBP3.46□□□□□ -1.86
RNU6-1140P-201ENST00000410517 CYP7B1O75881 506 aa3.46□□□□□ -1.86
RNU6-1140P-201ENST00000410517 VCAM1P19320 739 aa3.46□□□□□ -1.86
RNU6-1140P-201ENST00000410517 SDSP20132 328 aa3.46□□□□□ -1.86
RNU6-1140P-201ENST00000410517 CD40P25942 277 aa3.46□□□□□ -1.86
RNU6-1140P-201ENST00000410517 LSP1P33241 339 aa3.46□□□□□ -1.86
RNU6-1140P-201ENST00000410517 FNTBP49356 437 aa3.46□□□□□ -1.86
RNU6-1140P-201ENST00000410517 MRPS21P82921 87 aaKnown RBP3.46□□□□□ -1.86
RNU6-1140P-201ENST00000410517 LACTBP83111 547 aaPredicted RBP3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms