RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 RNF207Q6ZRF8 634 aa14.89□□□□□ -0.03
LIMS1-205ENST00000410093 TRAPPC11Q7Z392 1133 aa14.89□□□□□ -0.03
LIMS1-205ENST00000410093 CTAGE6Q86UF2 777 aa14.89□□□□□ -0.03
LIMS1-205ENST00000410093 NLRX1Q86UT6 975 aa14.89□□□□□ -0.03
LIMS1-205ENST00000410093 CTAGE4Q8IX94 777 aa14.89□□□□□ -0.03
LIMS1-205ENST00000410093 C4orf19Q8IY42 314 aa14.89□□□□□ -0.03
LIMS1-205ENST00000410093 TNS4Q8IZW8 715 aa14.89□□□□□ -0.03
LIMS1-205ENST00000410093 GPRASP2Q96D09 838 aa14.89□□□□□ -0.03
LIMS1-205ENST00000410093 TRERF1Q96PN7 1200 aa14.89□□□□□ -0.03
LIMS1-205ENST00000410093 SENP7Q9BQF6 1050 aa14.89□□□□□ -0.03
LIMS1-205ENST00000410093 LSM14BQ9BX40 385 aaKnown RBP14.89□□□□□ -0.03
LIMS1-205ENST00000410093 IRX2Q9BZI1 471 aaPredicted RBP14.89□□□□□ -0.03
LIMS1-205ENST00000410093 ST6GALNAC4Q9H4F1 302 aa14.89□□□□□ -0.03
LIMS1-205ENST00000410093 SCAF8Q9UPN6 1271 aaKnown RBP14.89□□□□□ -0.03
LIMS1-205ENST00000410093 JRKLQ9Y4A0 524 aa14.89□□□□□ -0.03
LIMS1-205ENST00000410093 SAR1BQ9Y6B6 198 aa14.89□□□□□ -0.03
LIMS1-205ENST00000410093 ASTN1O14525 1302 aa14.88□□□□□ -0.03
LIMS1-205ENST00000410093 NFIBO00712 420 aa14.88□□□□□ -0.03
LIMS1-205ENST00000410093 MAPK13O15264 365 aa14.88□□□□□ -0.03
LIMS1-205ENST00000410093 DHX15O43143 795 aaKnown RBP14.88□□□□□ -0.03
LIMS1-205ENST00000410093 CHMP2AO43633 222 aa14.88□□□□□ -0.03
LIMS1-205ENST00000410093 GFPT2O94808 682 aa14.88□□□□□ -0.03
LIMS1-205ENST00000410093 PRPF6O94906 941 aaKnown RBP14.88□□□□□ -0.03
LIMS1-205ENST00000410093 MYBP10242 640 aa14.88□□□□□ -0.03
LIMS1-205ENST00000410093 PTPRAP18433 802 aa14.88□□□□□ -0.03
LIMS1-205ENST00000410093 SCP2P22307 547 aa14.88□□□□□ -0.03
LIMS1-205ENST00000410093 RFX1P22670 979 aa14.88□□□□□ -0.03
LIMS1-205ENST00000410093 CCND2P30279 289 aa14.88□□□□□ -0.03
LIMS1-205ENST00000410093 HOXD13P35453 343 aa14.88□□□□□ -0.03
LIMS1-205ENST00000410093 EIF4A3P38919 411 aaKnown RBP14.88□□□□□ -0.03
LIMS1-205ENST00000410093 CASP5P51878 434 aa14.88□□□□□ -0.03
LIMS1-205ENST00000410093 NAA30Q147X3 362 aaPredicted RBP14.88□□□□□ -0.03
LIMS1-205ENST00000410093 PGM5Q15124 567 aa14.88□□□□□ -0.03
LIMS1-205ENST00000410093 ASTE1Q2TB18 679 aaPredicted RBP14.88□□□□□ -0.03
LIMS1-205ENST00000410093 C12orf56Q8IXR9 622 aa14.88□□□□□ -0.03
LIMS1-205ENST00000410093 PIGOQ8TEQ8 1089 aa14.88□□□□□ -0.03
LIMS1-205ENST00000410093 HVCN1Q96D96 273 aa14.88□□□□□ -0.03
LIMS1-205ENST00000410093 DRC1Q96MC2 740 aa14.88□□□□□ -0.03
LIMS1-205ENST00000410093 FGFBP2Q9BYJ0 223 aa14.88□□□□□ -0.03
LIMS1-205ENST00000410093 GBP3Q9H0R5 595 aa14.88□□□□□ -0.03
LIMS1-205ENST00000410093 RAVER2Q9HCJ3 691 aaKnown RBP14.88□□□□□ -0.03
LIMS1-205ENST00000410093 PXMP2Q9NR77 195 aa14.88□□□□□ -0.03
LIMS1-205ENST00000410093 ANKEF1Q9NU02 776 aa14.88□□□□□ -0.03
LIMS1-205ENST00000410093 FRMD4BQ9Y2L6 1034 aa14.88□□□□□ -0.03
LIMS1-205ENST00000410093 RLFQ13129 1914 aa14.88□□□□□ -0.03
LIMS1-205ENST00000410093 CCDC151A5D8V7 595 aa14.87□□□□□ -0.03
LIMS1-205ENST00000410093 WDR64B1ANS9 1081 aa14.87□□□□□ -0.03
LIMS1-205ENST00000410093 CA12O43570 354 aa14.87□□□□□ -0.03
LIMS1-205ENST00000410093 NOL4O94818 638 aa14.87□□□□□ -0.03
LIMS1-205ENST00000410093 TAL1P17542 331 aaPredicted RBP14.87□□□□□ -0.03
LIMS1-205ENST00000410093 MAGEA1P43355 309 aa14.87□□□□□ -0.03
LIMS1-205ENST00000410093 RPS6P62753 249 aaKnown RBP14.87□□□□□ -0.03
LIMS1-205ENST00000410093 SPP2Q13103 211 aa14.87□□□□□ -0.03
LIMS1-205ENST00000410093 COG2Q14746 738 aa14.87□□□□□ -0.03
LIMS1-205ENST00000410093 EXOC3L4Q17RC7 722 aa14.87□□□□□ -0.03
LIMS1-205ENST00000410093 NBPF12Q5TAG4 269 aaPredicted RBP14.87□□□□□ -0.03
LIMS1-205ENST00000410093 PRAMEF18Q5VWM3 479 aa14.87□□□□□ -0.03
LIMS1-205ENST00000410093 ZNF746Q6NUN9 644 aaPredicted RBP14.87□□□□□ -0.03
LIMS1-205ENST00000410093 ARMC9Q7Z3E5 817 aa14.87□□□□□ -0.03
LIMS1-205ENST00000410093 CPXCR1Q8N123 301 aa14.87□□□□□ -0.03
LIMS1-205ENST00000410093 HNRNPLLQ8WVV9 542 aaKnown RBP14.87□□□□□ -0.03
LIMS1-205ENST00000410093 UIMC1Q96RL1 719 aa14.87□□□□□ -0.03
LIMS1-205ENST00000410093 RMDN3Q96TC7 470 aa14.87□□□□□ -0.03
LIMS1-205ENST00000410093 STRA6Q9BX79 667 aa14.87□□□□□ -0.03
LIMS1-205ENST00000410093 C17orf75Q9HAS0 396 aa14.87□□□□□ -0.03
LIMS1-205ENST00000410093 PRDM10Q9NQV6 1147 aa14.87□□□□□ -0.03
LIMS1-205ENST00000410093 DMAC2Q9NW81 257 aa14.87□□□□□ -0.03
LIMS1-205ENST00000410093 HOXC10Q9NYD6 342 aa14.87□□□□□ -0.03
LIMS1-205ENST00000410093 TMOD4Q9NZQ9 345 aa14.87□□□□□ -0.03
LIMS1-205ENST00000410093 COL20A1Q9P218 1284 aa14.87□□□□□ -0.03
LIMS1-205ENST00000410093 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.87□□□□□ -0.03
LIMS1-205ENST00000410093 V9GYY5 206 aaPredicted RBP14.87□□□□□ -0.03
LIMS1-205ENST00000410093 COL11A1P12107 1806 aaPredicted RBP14.87□□□□□ -0.03
LIMS1-205ENST00000410093 BTNL10A8MVZ5 291 aa14.87□□□□□ -0.03
LIMS1-205ENST00000410093 ERLIN1O75477 346 aa14.87□□□□□ -0.03
LIMS1-205ENST00000410093 CCDC172P0C7W6 258 aa14.87□□□□□ -0.03
LIMS1-205ENST00000410093 DSG3P32926 999 aa14.87□□□□□ -0.03
LIMS1-205ENST00000410093 LBX1P52954 281 aa14.87□□□□□ -0.03
LIMS1-205ENST00000410093 PSMC5P62195 406 aa14.87□□□□□ -0.03
LIMS1-205ENST00000410093 ITIH3Q06033 890 aa14.87□□□□□ -0.03
LIMS1-205ENST00000410093 ASIC2Q16515 512 aa14.87□□□□□ -0.03
LIMS1-205ENST00000410093 ODR4Q5SWX8 454 aa14.87□□□□□ -0.03
LIMS1-205ENST00000410093 ARHGEF16Q5VV41 709 aa14.87□□□□□ -0.03
LIMS1-205ENST00000410093 PADI6Q6TGC4 694 aa14.87□□□□□ -0.03
LIMS1-205ENST00000410093 VPS36Q86VN1 386 aa14.87□□□□□ -0.03
LIMS1-205ENST00000410093 SMAP1Q8IYB5 467 aaPredicted RBP14.87□□□□□ -0.03
LIMS1-205ENST00000410093 MSANTD4Q8NCY6 345 aa14.87□□□□□ -0.03
LIMS1-205ENST00000410093 SMCR8Q8TEV9 937 aaPredicted RBP14.87□□□□□ -0.03
LIMS1-205ENST00000410093 RUBCNQ92622 972 aa14.87□□□□□ -0.03
LIMS1-205ENST00000410093 CCDC43Q96MW1 224 aaKnown RBP14.87□□□□□ -0.03
LIMS1-205ENST00000410093 PDCD2LQ9BRP1 358 aa14.87□□□□□ -0.03
LIMS1-205ENST00000410093 GANQ9H2C0 597 aa14.87□□□□□ -0.03
LIMS1-205ENST00000410093 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.87□□□□□ -0.03
LIMS1-205ENST00000410093 LOC285556D6RIA3 1793 aa14.86□□□□□ -0.03
LIMS1-205ENST00000410093 RSPH10B2B2RC85 870 aa14.86□□□□□ -0.03
LIMS1-205ENST00000410093 EPHB6O15197 1021 aa14.86□□□□□ -0.03
LIMS1-205ENST00000410093 TGFB1I1O43294 461 aa14.86□□□□□ -0.03
LIMS1-205ENST00000410093 N4BP1O75113 896 aaKnown RBP14.86□□□□□ -0.03
LIMS1-205ENST00000410093 PPP1R37O75864 691 aa14.86□□□□□ -0.03
LIMS1-205ENST00000410093 AKAP3O75969 853 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms