RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 SEPT9Q9UHD8 586 aaPredicted RBP18.4■□□□□ 0.54
TSPAN4-208ENST00000409531 TRPC6Q9Y210 931 aa18.4■□□□□ 0.54
TSPAN4-208ENST00000409531 PPME1Q9Y570 386 aa18.4■□□□□ 0.54
TSPAN4-208ENST00000409531 UMODL1Q5DID0 1318 aa18.39■□□□□ 0.53
TSPAN4-208ENST00000409531 NR1I2O75469 434 aa18.39■□□□□ 0.53
TSPAN4-208ENST00000409531 SLFN14P0C7P3 912 aa18.39■□□□□ 0.53
TSPAN4-208ENST00000409531 CSF2RAP15509 400 aa18.39■□□□□ 0.53
TSPAN4-208ENST00000409531 LIG1P18858 919 aa18.39■□□□□ 0.53
TSPAN4-208ENST00000409531 ATP4AP20648 1035 aa18.39■□□□□ 0.53
TSPAN4-208ENST00000409531 EPHB4P54760 987 aa18.39■□□□□ 0.53
TSPAN4-208ENST00000409531 CCL23P55773 120 aa18.39■□□□□ 0.53
TSPAN4-208ENST00000409531 BFSP2Q13515 415 aa18.39■□□□□ 0.53
TSPAN4-208ENST00000409531 SNW1Q13573 536 aaKnown RBP18.39■□□□□ 0.53
TSPAN4-208ENST00000409531 NFKBIBQ15653 356 aa18.39■□□□□ 0.53
TSPAN4-208ENST00000409531 E2F4Q16254 413 aa18.39■□□□□ 0.53
TSPAN4-208ENST00000409531 KANK3Q6NY19 840 aa18.39■□□□□ 0.53
TSPAN4-208ENST00000409531 PIGOQ8TEQ8 1089 aa18.39■□□□□ 0.53
TSPAN4-208ENST00000409531 TIGD1Q96MW7 591 aa18.39■□□□□ 0.53
TSPAN4-208ENST00000409531 NIFKQ9BYG3 293 aaKnown RBP18.39■□□□□ 0.53
TSPAN4-208ENST00000409531 LRRC27Q9C0I9 530 aa18.39■□□□□ 0.53
TSPAN4-208ENST00000409531 COL1A2P08123 1366 aa18.38■□□□□ 0.53
TSPAN4-208ENST00000409531 LTBP2Q14767 1821 aa18.38■□□□□ 0.53
TSPAN4-208ENST00000409531 ARHGEF35A5YM69 484 aa18.38■□□□□ 0.53
TSPAN4-208ENST00000409531 E9PMD0 336 aa18.38■□□□□ 0.53
TSPAN4-208ENST00000409531 PITPNM1O00562 1244 aa18.38■□□□□ 0.53
TSPAN4-208ENST00000409531 AMPD3Q01432 767 aa18.38■□□□□ 0.53
TSPAN4-208ENST00000409531 SKOR2Q2VWA4 1001 aaPredicted RBP18.38■□□□□ 0.53
TSPAN4-208ENST00000409531 LRIT3Q3SXY7 679 aa18.38■□□□□ 0.53
TSPAN4-208ENST00000409531 NAALADL2Q58DX5 795 aa18.38■□□□□ 0.53
TSPAN4-208ENST00000409531 XKR9Q5GH70 373 aa18.38■□□□□ 0.53
TSPAN4-208ENST00000409531 ANO5Q75V66 913 aa18.38■□□□□ 0.53
TSPAN4-208ENST00000409531 SV2BQ7L1I2 683 aa18.38■□□□□ 0.53
TSPAN4-208ENST00000409531 TRMT1LQ7Z2T5 733 aaKnown RBP18.38■□□□□ 0.53
TSPAN4-208ENST00000409531 KCNK18Q7Z418 384 aa18.38■□□□□ 0.53
TSPAN4-208ENST00000409531 EXOC8Q8IYI6 725 aa18.38■□□□□ 0.53
TSPAN4-208ENST00000409531 RETREG2Q8NC44 543 aa18.38■□□□□ 0.53
TSPAN4-208ENST00000409531 CNNM3Q8NE01 707 aa18.38■□□□□ 0.53
TSPAN4-208ENST00000409531 CTAGE1Q96RT6 745 aa18.38■□□□□ 0.53
TSPAN4-208ENST00000409531 WNT8AQ9H1J5 351 aa18.38■□□□□ 0.53
TSPAN4-208ENST00000409531 BHMT2Q9H2M3 363 aa18.38■□□□□ 0.53
TSPAN4-208ENST00000409531 RNPEPQ9H4A4 650 aa18.38■□□□□ 0.53
TSPAN4-208ENST00000409531 BLOC1S4Q9NUP1 217 aa18.38■□□□□ 0.53
TSPAN4-208ENST00000409531 DACT1Q9NYF0 836 aa18.38■□□□□ 0.53
TSPAN4-208ENST00000409531 HOOK1Q9UJC3 728 aaKnown RBP18.38■□□□□ 0.53
TSPAN4-208ENST00000409531 C17orf102A2RUQ5 167 aa18.37■□□□□ 0.53
TSPAN4-208ENST00000409531 ACTN4O43707 911 aaKnown RBP18.37■□□□□ 0.53
TSPAN4-208ENST00000409531 STBD1O95210 358 aa18.37■□□□□ 0.53
TSPAN4-208ENST00000409531 PLA2G4BP0C869 781 aa18.37■□□□□ 0.53
TSPAN4-208ENST00000409531 SMIM10L2AP0DMW4 78 aa18.37■□□□□ 0.53
TSPAN4-208ENST00000409531 SMIM10L2BP0DMW5 78 aa18.37■□□□□ 0.53
TSPAN4-208ENST00000409531 GNAT1P11488 350 aa18.37■□□□□ 0.53
TSPAN4-208ENST00000409531 RARRES1P49788 294 aa18.37■□□□□ 0.53
TSPAN4-208ENST00000409531 PTK7Q13308 1070 aa18.37■□□□□ 0.53
TSPAN4-208ENST00000409531 ZNF484Q5JVG2 852 aa18.37■□□□□ 0.53
TSPAN4-208ENST00000409531 C9orf50Q5SZB4 431 aa18.37■□□□□ 0.53
TSPAN4-208ENST00000409531 KRBA2Q6ZNG9 492 aa18.37■□□□□ 0.53
TSPAN4-208ENST00000409531 C16orf59Q7L2K0 433 aa18.37■□□□□ 0.53
TSPAN4-208ENST00000409531 SYT2Q8N9I0 419 aaPredicted RBP18.37■□□□□ 0.53
TSPAN4-208ENST00000409531 CAGE1Q8TC20 777 aa18.37■□□□□ 0.53
TSPAN4-208ENST00000409531 CEP170P1Q96L14 293 aa18.37■□□□□ 0.53
TSPAN4-208ENST00000409531 TNMDQ9H2S6 317 aa18.37■□□□□ 0.53
TSPAN4-208ENST00000409531 CYP26B1Q9NR63 512 aa18.37■□□□□ 0.53
TSPAN4-208ENST00000409531 KCND2Q9NZV8 630 aa18.37■□□□□ 0.53
TSPAN4-208ENST00000409531 SERTAD1Q9UHV2 236 aa18.37■□□□□ 0.53
TSPAN4-208ENST00000409531 MYH11P35749 1972 aa18.37■□□□□ 0.53
TSPAN4-208ENST00000409531 NRCAMQ92823 1304 aa18.36■□□□□ 0.53
TSPAN4-208ENST00000409531 RRN3P2A6NIE6 340 aa18.36■□□□□ 0.53
TSPAN4-208ENST00000409531 ZBTB39O15060 712 aa18.36■□□□□ 0.53
TSPAN4-208ENST00000409531 SSBP05455 408 aaKnown RBP eCLIP18.36■□□□□ 0.53
TSPAN4-208ENST00000409531 HOXC8P31273 242 aa18.36■□□□□ 0.53
TSPAN4-208ENST00000409531 ZNF200P98182 395 aaPredicted RBP18.36■□□□□ 0.53
TSPAN4-208ENST00000409531 HIC1Q14526 733 aa18.36■□□□□ 0.53
TSPAN4-208ENST00000409531 MCM6Q14566 821 aa18.36■□□□□ 0.53
TSPAN4-208ENST00000409531 LONRF3Q496Y0 759 aa18.36■□□□□ 0.53
TSPAN4-208ENST00000409531 MTERF2Q49AM1 385 aa18.36■□□□□ 0.53
TSPAN4-208ENST00000409531 RPUSD2Q8IZ73 545 aaKnown RBP18.36■□□□□ 0.53
TSPAN4-208ENST00000409531 CCDC155Q8N6L0 562 aa18.36■□□□□ 0.53
TSPAN4-208ENST00000409531 GPT2Q8TD30 523 aa18.36■□□□□ 0.53
TSPAN4-208ENST00000409531 JPH2Q9BR39 696 aaPredicted RBP18.36■□□□□ 0.53
TSPAN4-208ENST00000409531 IL23AQ9NPF7 189 aa18.36■□□□□ 0.53
TSPAN4-208ENST00000409531 KBTBD4Q9NVX7 518 aa18.36■□□□□ 0.53
TSPAN4-208ENST00000409531 EVPLQ92817 2033 aa18.36■□□□□ 0.53
TSPAN4-208ENST00000409531 TRIP12Q14669 1992 aaPredicted RBP18.35■□□□□ 0.53
TSPAN4-208ENST00000409531 A0A087WWV3 80 aa18.35■□□□□ 0.53
TSPAN4-208ENST00000409531 MYL1P05976 194 aa18.35■□□□□ 0.53
TSPAN4-208ENST00000409531 IQCF3P0C7M6 154 aa18.35■□□□□ 0.53
TSPAN4-208ENST00000409531 INSRRP14616 1297 aa18.35■□□□□ 0.53
TSPAN4-208ENST00000409531 RFC5P40937 340 aa18.35■□□□□ 0.53
TSPAN4-208ENST00000409531 SLC12A3P55017 1021 aa18.35■□□□□ 0.53
TSPAN4-208ENST00000409531 PPFIA1Q13136 1202 aa18.35■□□□□ 0.53
TSPAN4-208ENST00000409531 PLA2G4FQ68DD2 849 aa18.35■□□□□ 0.53
TSPAN4-208ENST00000409531 ELOA2Q8IYF1 753 aaPredicted RBP18.35■□□□□ 0.53
TSPAN4-208ENST00000409531 SCLYQ96I15 445 aa18.35■□□□□ 0.53
TSPAN4-208ENST00000409531 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.35■□□□□ 0.532e-12■□□□□ 9.2
TSPAN4-208ENST00000409531 BMP2KQ9NSY1 1161 aaPredicted RBP18.35■□□□□ 0.53
TSPAN4-208ENST00000409531 SETD4Q9NVD3 440 aa18.35■□□□□ 0.53
TSPAN4-208ENST00000409531 DGAT1O75907 488 aa18.34■□□□□ 0.53
TSPAN4-208ENST00000409531 ACRP10323 421 aa18.34■□□□□ 0.53
TSPAN4-208ENST00000409531 NPEPPSP55786 919 aa18.34■□□□□ 0.53
TSPAN4-208ENST00000409531 RBL2Q08999 1139 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms