RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 SLC12A4Q9UP95 1085 aa16.8■□□□□ 0.28
LIMS2-205ENST00000409455 MTMR7Q9Y216 660 aa16.8■□□□□ 0.28
LIMS2-205ENST00000409455 UTP11Q9Y3A2 253 aaKnown RBP16.8■□□□□ 0.28
LIMS2-205ENST00000409455 ADAMTSL1Q8N6G6 1762 aa16.8■□□□□ 0.28
LIMS2-205ENST00000409455 SLURP2P0DP57 97 aa16.8■□□□□ 0.28
LIMS2-205ENST00000409455 ZKSCAN8Q15776 578 aaPredicted RBP16.8■□□□□ 0.28
LIMS2-205ENST00000409455 ACCSLQ4AC99 568 aa16.8■□□□□ 0.28
LIMS2-205ENST00000409455 FOXR2Q6PJQ5 311 aa16.8■□□□□ 0.28
LIMS2-205ENST00000409455 KIRREL3Q8IZU9 778 aa16.8■□□□□ 0.28
LIMS2-205ENST00000409455 TCP11Q8WWU5 503 aa16.8■□□□□ 0.28
LIMS2-205ENST00000409455 CEP95Q96GE4 821 aa16.8■□□□□ 0.28
LIMS2-205ENST00000409455 EBF2Q9HAK2 575 aa16.8■□□□□ 0.28
LIMS2-205ENST00000409455 FAM114A2Q9NRY5 505 aa16.8■□□□□ 0.28
LIMS2-205ENST00000409455 AIPL1Q9NZN9 384 aa16.8■□□□□ 0.28
LIMS2-205ENST00000409455 DDX60LQ5H9U9 1706 aaKnown RBP16.8■□□□□ 0.28
LIMS2-205ENST00000409455 UTRNP46939 3433 aa16.8■□□□□ 0.28
LIMS2-205ENST00000409455 TRAF5O00463 557 aa16.79■□□□□ 0.28
LIMS2-205ENST00000409455 KIF3CO14782 793 aa16.79■□□□□ 0.28
LIMS2-205ENST00000409455 CLTAP09496 248 aa16.79■□□□□ 0.28
LIMS2-205ENST00000409455 IRX1P78414 480 aaPredicted RBP16.79■□□□□ 0.28
LIMS2-205ENST00000409455 MYO1EQ12965 1108 aa16.79■□□□□ 0.28
LIMS2-205ENST00000409455 PSMD2Q13200 908 aa16.79■□□□□ 0.28
LIMS2-205ENST00000409455 RIPK1Q13546 671 aa16.79■□□□□ 0.28
LIMS2-205ENST00000409455 ITIH4Q14624 930 aa16.79■□□□□ 0.28
LIMS2-205ENST00000409455 GRM4Q14833 912 aa16.79■□□□□ 0.28
LIMS2-205ENST00000409455 NEK8Q86SG6 692 aa16.79■□□□□ 0.28
LIMS2-205ENST00000409455 PNMA8AQ86V59 439 aaPredicted RBP16.79■□□□□ 0.28
LIMS2-205ENST00000409455 MDM1Q8TC05 714 aa16.79■□□□□ 0.28
LIMS2-205ENST00000409455 NSMCE1Q8WV22 266 aa16.79■□□□□ 0.28
LIMS2-205ENST00000409455 TLCD1Q96CP7 247 aa16.79■□□□□ 0.28
LIMS2-205ENST00000409455 STAMBPL1Q96FJ0 436 aa16.79■□□□□ 0.28
LIMS2-205ENST00000409455 BLOC1S4Q9NUP1 217 aa16.79■□□□□ 0.28
LIMS2-205ENST00000409455 MYH7BA7E2Y1 1941 aa16.79■□□□□ 0.28
LIMS2-205ENST00000409455 CFAP73A6NFT4 308 aa16.79■□□□□ 0.28
LIMS2-205ENST00000409455 ASAP2O43150 1006 aa16.79■□□□□ 0.28
LIMS2-205ENST00000409455 MMEP08473 750 aa16.79■□□□□ 0.28
LIMS2-205ENST00000409455 EPS15P42566 896 aa16.79■□□□□ 0.28
LIMS2-205ENST00000409455 MYOCDQ8IZQ8 938 aa16.79■□□□□ 0.28
LIMS2-205ENST00000409455 PROCA1Q8NCQ7 364 aaPredicted RBP16.79■□□□□ 0.28
LIMS2-205ENST00000409455 GOLPH3Q9H4A6 298 aa16.79■□□□□ 0.28
LIMS2-205ENST00000409455 SAMD15Q9P1V8 674 aa16.79■□□□□ 0.28
LIMS2-205ENST00000409455 MAD2L2Q9UI95 211 aa16.79■□□□□ 0.28
LIMS2-205ENST00000409455 GRB10Q13322 594 aa16.78■□□□□ 0.28
LIMS2-205ENST00000409455 LRRC41Q15345 812 aa16.78■□□□□ 0.28
LIMS2-205ENST00000409455 PRMT6Q96LA8 375 aaPredicted RBP16.78■□□□□ 0.28
LIMS2-205ENST00000409455 LRRC27Q9C0I9 530 aa16.78■□□□□ 0.28
LIMS2-205ENST00000409455 TDRD3Q9H7E2 651 aaKnown RBP16.78■□□□□ 0.28
LIMS2-205ENST00000409455 FAM198AQ9UFP1 575 aa16.78■□□□□ 0.28
LIMS2-205ENST00000409455 PNMA2Q9UL42 364 aa16.78■□□□□ 0.28
LIMS2-205ENST00000409455 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.78■□□□□ 0.28
LIMS2-205ENST00000409455 TTI1O43156 1089 aa16.78■□□□□ 0.28
LIMS2-205ENST00000409455 TXKP42681 527 aa16.78■□□□□ 0.28
LIMS2-205ENST00000409455 NAPAP54920 295 aa16.78■□□□□ 0.28
LIMS2-205ENST00000409455 SLMAPQ14BN4 828 aa16.78■□□□□ 0.28
LIMS2-205ENST00000409455 DALRD3Q5D0E6 543 aaKnown RBP16.78■□□□□ 0.28
LIMS2-205ENST00000409455 SPDYCQ5MJ68 293 aa16.78■□□□□ 0.28
LIMS2-205ENST00000409455 METTL13Q8N6R0 699 aa16.78■□□□□ 0.28
LIMS2-205ENST00000409455 ZNF317Q96PQ6 595 aaPredicted RBP16.78■□□□□ 0.28
LIMS2-205ENST00000409455 FMO2Q99518 471 aa16.78■□□□□ 0.28
LIMS2-205ENST00000409455 ZMYND12Q9H0C1 365 aa16.78■□□□□ 0.28
LIMS2-205ENST00000409455 ATP8A1Q9Y2Q0 1164 aa16.78■□□□□ 0.28
LIMS2-205ENST00000409455 MYH4Q9Y623 1939 aa16.78■□□□□ 0.28
LIMS2-205ENST00000409455 GNA14O95837 355 aa16.77■□□□□ 0.28
LIMS2-205ENST00000409455 HLA-DOAP06340 250 aa16.77■□□□□ 0.28
LIMS2-205ENST00000409455 AKR1B1P15121 316 aa16.77■□□□□ 0.28
LIMS2-205ENST00000409455 CHN1P15882 459 aa16.77■□□□□ 0.28
LIMS2-205ENST00000409455 PTPROQ16827 1216 aa16.77■□□□□ 0.28
LIMS2-205ENST00000409455 RSBN1LQ6PCB5 846 aaPredicted RBP16.77■□□□□ 0.28
LIMS2-205ENST00000409455 PEX26Q7Z412 305 aa16.77■□□□□ 0.28
LIMS2-205ENST00000409455 LRRC57Q8N9N7 239 aa16.77■□□□□ 0.28
LIMS2-205ENST00000409455 SEC14L1Q92503 715 aa16.77■□□□□ 0.28
LIMS2-205ENST00000409455 SELENOSQ9BQE4 189 aa16.77■□□□□ 0.28
LIMS2-205ENST00000409455 IDI2Q9BXS1 227 aa16.77■□□□□ 0.28
LIMS2-205ENST00000409455 DPH5Q9H2P9 285 aa16.77■□□□□ 0.28
LIMS2-205ENST00000409455 C15orf41Q9Y2V0 281 aa16.77■□□□□ 0.28
LIMS2-205ENST00000409455 ZBTB12Q9Y330 459 aaPredicted RBP16.77■□□□□ 0.28
LIMS2-205ENST00000409455 FOCADQ5VW36 1801 aa16.77■□□□□ 0.28
LIMS2-205ENST00000409455 DDTLA6NHG4 134 aaPredicted RBP16.77■□□□□ 0.28
LIMS2-205ENST00000409455 VIL1P09327 827 aaKnown RBP16.77■□□□□ 0.28
LIMS2-205ENST00000409455 NAIF1Q69YI7 327 aaPredicted RBP16.77■□□□□ 0.28
LIMS2-205ENST00000409455 DDX12PQ92771 950 aa16.77■□□□□ 0.28
LIMS2-205ENST00000409455 THOC1Q96FV9 657 aaKnown RBP16.77■□□□□ 0.28
LIMS2-205ENST00000409455 COL4A5P29400 1685 aa16.77■□□□□ 0.27
LIMS2-205ENST00000409455 CYTH3O43739 400 aa16.76■□□□□ 0.27
LIMS2-205ENST00000409455 CAND2O75155 1236 aa16.76■□□□□ 0.27
LIMS2-205ENST00000409455 PPFIA2O75334 1257 aa16.76■□□□□ 0.27
LIMS2-205ENST00000409455 ITGA4P13612 1032 aa16.76■□□□□ 0.27
LIMS2-205ENST00000409455 GNA11P29992 359 aa16.76■□□□□ 0.27
LIMS2-205ENST00000409455 SHMT1P34896 483 aa16.76■□□□□ 0.27
LIMS2-205ENST00000409455 TMEM266Q2M3C6 531 aa16.76■□□□□ 0.27
LIMS2-205ENST00000409455 SOGA3Q5TF21 947 aa16.76■□□□□ 0.27
LIMS2-205ENST00000409455 TBC1D1Q86TI0 1168 aaPredicted RBP16.76■□□□□ 0.27
LIMS2-205ENST00000409455 GLIS3Q8NEA6 775 aa16.76■□□□□ 0.27
LIMS2-205ENST00000409455 LMBR1Q8WVP7 490 aa16.76■□□□□ 0.27
LIMS2-205ENST00000409455 RAD54LQ92698 747 aa16.76■□□□□ 0.27
LIMS2-205ENST00000409455 CEP63Q96MT8 703 aa16.76■□□□□ 0.27
LIMS2-205ENST00000409455 C6orf50Q9HD87 102 aa16.76■□□□□ 0.27
LIMS2-205ENST00000409455 ANP32DO95626 131 aa16.76■□□□□ 0.27
LIMS2-205ENST00000409455 NOVP48745 357 aa16.76■□□□□ 0.27
LIMS2-205ENST00000409455 PTK2Q05397 1052 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms