RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 IWS1Q96ST2 819 aa27.05■■□□□ 1.92
DNMT3A-206ENST00000406659 NAPGQ99747 312 aaPredicted RBP27.05■■□□□ 1.92
DNMT3A-206ENST00000406659 MKNK1Q9BUB5 465 aa27.05■■□□□ 1.92
DNMT3A-206ENST00000406659 AGPAT3Q9NRZ7 376 aa27.05■■□□□ 1.92
DNMT3A-206ENST00000406659 PPP1R37O75864 691 aa27.04■■□□□ 1.92
DNMT3A-206ENST00000406659 RGS20O76081 388 aa27.04■■□□□ 1.92
DNMT3A-206ENST00000406659 PPATQ06203 517 aa27.04■■□□□ 1.92
DNMT3A-206ENST00000406659 TUBB2AQ13885 445 aa27.04■■□□□ 1.92
DNMT3A-206ENST00000406659 TRMT1LQ7Z2T5 733 aaKnown RBP27.04■■□□□ 1.92
DNMT3A-206ENST00000406659 SMAP1Q8IYB5 467 aaPredicted RBP27.04■■□□□ 1.92
DNMT3A-206ENST00000406659 ANKRD35Q8N283 1001 aa27.04■■□□□ 1.92
DNMT3A-206ENST00000406659 TUBB2BQ9BVA1 445 aa27.04■■□□□ 1.92
DNMT3A-206ENST00000406659 FBXO40Q9UH90 709 aa27.04■■□□□ 1.92
DNMT3A-206ENST00000406659 FRMD4BQ9Y2L6 1034 aa27.04■■□□□ 1.92
DNMT3A-206ENST00000406659 NFASCO94856 1347 aa27.04■■□□□ 1.92
DNMT3A-206ENST00000406659 TMEM150BA6NC51 233 aa27.04■■□□□ 1.92
DNMT3A-206ENST00000406659 RRP9O43818 475 aaKnown RBP27.04■■□□□ 1.92
DNMT3A-206ENST00000406659 AKR1B10O60218 316 aa27.04■■□□□ 1.92
DNMT3A-206ENST00000406659 DKC1O60832 514 aaKnown RBP eCLIP27.04■■□□□ 1.921e-5■■■■□ 25.7
DNMT3A-206ENST00000406659 KIF11P52732 1056 aa27.04■■□□□ 1.92
DNMT3A-206ENST00000406659 CYP27A1Q02318 531 aa27.04■■□□□ 1.92
DNMT3A-206ENST00000406659 ELF2Q15723 593 aa27.04■■□□□ 1.92
DNMT3A-206ENST00000406659 EXOC3L4Q17RC7 722 aa27.04■■□□□ 1.92
DNMT3A-206ENST00000406659 ERO1BQ86YB8 467 aa27.04■■□□□ 1.92
DNMT3A-206ENST00000406659 PDCL2Q8N4E4 241 aa27.04■■□□□ 1.92
DNMT3A-206ENST00000406659 DNERQ8NFT8 737 aa27.04■■□□□ 1.92
DNMT3A-206ENST00000406659 OTUD5Q96G74 571 aa27.04■■□□□ 1.92
DNMT3A-206ENST00000406659 GANQ9H2C0 597 aa27.04■■□□□ 1.92
DNMT3A-206ENST00000406659 DMAC2Q9NW81 257 aa27.04■■□□□ 1.92
DNMT3A-206ENST00000406659 PSAPP07602 524 aa27.03■■□□□ 1.92
DNMT3A-206ENST00000406659 CYP2J2P51589 502 aa27.03■■□□□ 1.92
DNMT3A-206ENST00000406659 VAV2P52735 878 aa27.03■■□□□ 1.92
DNMT3A-206ENST00000406659 TTLL12Q14166 644 aaPredicted RBP27.03■■□□□ 1.92
DNMT3A-206ENST00000406659 GBP6Q6ZN66 633 aa27.03■■□□□ 1.92
DNMT3A-206ENST00000406659 USP50Q70EL3 339 aaPredicted RBP27.03■■□□□ 1.92
DNMT3A-206ENST00000406659 OTUD6AQ7L8S5 288 aa27.03■■□□□ 1.92
DNMT3A-206ENST00000406659 ANKRD13AQ8IZ07 590 aa27.03■■□□□ 1.92
DNMT3A-206ENST00000406659 PROCA1Q8NCQ7 364 aaPredicted RBP27.03■■□□□ 1.92
DNMT3A-206ENST00000406659 EHBP1Q8NDI1 1231 aa27.03■■□□□ 1.92
DNMT3A-206ENST00000406659 SLC35C1Q96A29 364 aa27.03■■□□□ 1.92
DNMT3A-206ENST00000406659 BORCS6Q96GS4 357 aa27.03■■□□□ 1.92
DNMT3A-206ENST00000406659 ACCSQ96QU6 501 aa27.03■■□□□ 1.92
DNMT3A-206ENST00000406659 SH2D3AQ9BRG2 576 aa27.03■■□□□ 1.92
DNMT3A-206ENST00000406659 TSGA10Q9BZW7 698 aa27.03■■□□□ 1.92
DNMT3A-206ENST00000406659 TMEM206Q9H813 350 aa27.03■■□□□ 1.92
DNMT3A-206ENST00000406659 PLCB1Q9NQ66 1216 aa27.03■■□□□ 1.92
DNMT3A-206ENST00000406659 GABBR1Q9UBS5 961 aa27.03■■□□□ 1.92
DNMT3A-206ENST00000406659 PTPRFP10586 1907 aa27.03■■□□□ 1.92
DNMT3A-206ENST00000406659 OTOFQ9HC10 1997 aa27.03■■□□□ 1.92
DNMT3A-206ENST00000406659 KIAA1217Q5T5P2 1943 aa27.02■■□□□ 1.92
DNMT3A-206ENST00000406659 SPATA31C2B4DYI2 1134 aa27.02■■□□□ 1.92
DNMT3A-206ENST00000406659 IRX3P78415 501 aaPredicted RBP27.02■■□□□ 1.92
DNMT3A-206ENST00000406659 APBA1Q02410 837 aa27.02■■□□□ 1.92
DNMT3A-206ENST00000406659 HSP90AA2PQ14568 343 aaPredicted RBP27.02■■□□□ 1.92
DNMT3A-206ENST00000406659 STXBP2Q15833 593 aa27.02■■□□□ 1.92
DNMT3A-206ENST00000406659 SLC9C1Q4G0N8 1177 aa27.02■■□□□ 1.92
DNMT3A-206ENST00000406659 PLA2G4FQ68DD2 849 aa27.02■■□□□ 1.92
DNMT3A-206ENST00000406659 RIOX2Q8IUF8 465 aa27.02■■□□□ 1.92
DNMT3A-206ENST00000406659 ATP6V0A1Q93050 837 aa27.02■■□□□ 1.92
DNMT3A-206ENST00000406659 CDCA5Q96FF9 252 aa27.02■■□□□ 1.92
DNMT3A-206ENST00000406659 JPH1Q9HDC5 661 aaPredicted RBP27.02■■□□□ 1.92
DNMT3A-206ENST00000406659 BTBD7Q9P203 1132 aa27.02■■□□□ 1.92
DNMT3A-206ENST00000406659 CGNQ9P2M7 1197 aaKnown RBP27.02■■□□□ 1.92
DNMT3A-206ENST00000406659 SLC9A2Q9UBY0 812 aa27.02■■□□□ 1.92
DNMT3A-206ENST00000406659 TFR2Q9UP52 801 aa27.02■■□□□ 1.92
DNMT3A-206ENST00000406659 PFASO15067 1338 aa27.02■■□□□ 1.92
DNMT3A-206ENST00000406659 A0A0G2JLL6 359 aaPredicted RBP27.02■■□□□ 1.92
DNMT3A-206ENST00000406659 SSU72P8A0A1W2PR75 194 aa27.02■■□□□ 1.92
DNMT3A-206ENST00000406659 IRF6O14896 467 aa27.02■■□□□ 1.92
DNMT3A-206ENST00000406659 SERPING1P05155 500 aa27.02■■□□□ 1.92
DNMT3A-206ENST00000406659 NPEPPSP55786 919 aa27.02■■□□□ 1.92
DNMT3A-206ENST00000406659 KIF5AQ12840 1032 aa27.02■■□□□ 1.92
DNMT3A-206ENST00000406659 MAPK8IP2Q13387 824 aaPredicted RBP27.02■■□□□ 1.92
DNMT3A-206ENST00000406659 ERCC6LQ2NKX8 1250 aa27.02■■□□□ 1.92
DNMT3A-206ENST00000406659 TDRD12Q587J7 1177 aaKnown RBP27.02■■□□□ 1.92
DNMT3A-206ENST00000406659 PRRT2Q7Z6L0 340 aaPredicted RBP27.02■■□□□ 1.92
DNMT3A-206ENST00000406659 GPIHBP1Q8IV16 184 aa27.02■■□□□ 1.92
DNMT3A-206ENST00000406659 PCDHA13Q9Y5I0 950 aa27.02■■□□□ 1.92
DNMT3A-206ENST00000406659 PAPPA2Q9BXP8 1791 aa27.01■■□□□ 1.91
DNMT3A-206ENST00000406659 CXCL11O14625 94 aa27.01■■□□□ 1.91
DNMT3A-206ENST00000406659 LCA5LO95447 670 aa27.01■■□□□ 1.91
DNMT3A-206ENST00000406659 SLC9A1P19634 815 aa27.01■■□□□ 1.91
DNMT3A-206ENST00000406659 MYBPC2Q14324 1141 aa27.01■■□□□ 1.91
DNMT3A-206ENST00000406659 FAM102BQ5T8I3 360 aa27.01■■□□□ 1.91
DNMT3A-206ENST00000406659 SLC9A9Q8IVB4 645 aa27.01■■□□□ 1.91
DNMT3A-206ENST00000406659 UBXN4Q92575 508 aa27.01■■□□□ 1.91
DNMT3A-206ENST00000406659 CLMNQ96JQ2 1002 aa27.01■■□□□ 1.91
DNMT3A-206ENST00000406659 IFIH1Q9BYX4 1025 aaKnown RBP27.01■■□□□ 1.91
DNMT3A-206ENST00000406659 CDC23Q9UJX2 597 aa27.01■■□□□ 1.91
DNMT3A-206ENST00000406659 RCCD1A6NED2 376 aa27■■□□□ 1.91
DNMT3A-206ENST00000406659 EFCAB8A8MWE9 144 aa27■■□□□ 1.91
DNMT3A-206ENST00000406659 ZNF263O14978 683 aa27■■□□□ 1.91
DNMT3A-206ENST00000406659 TADA3O75528 432 aa27■■□□□ 1.91
DNMT3A-206ENST00000406659 ACTN1P12814 892 aa27■■□□□ 1.91
DNMT3A-206ENST00000406659 PON1P27169 355 aa27■■□□□ 1.91
DNMT3A-206ENST00000406659 CNTN2Q02246 1040 aa27■■□□□ 1.91
DNMT3A-206ENST00000406659 RAPGEF1Q13905 1077 aa27■■□□□ 1.91
DNMT3A-206ENST00000406659 HGSNATQ68CP4 663 aa27■■□□□ 1.91
DNMT3A-206ENST00000406659 SWSAP1Q6NVH7 229 aa27■■□□□ 1.91
DNMT3A-206ENST00000406659 SLC17A8Q8NDX2 589 aa27■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms