RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 ATG7O95352 703 aa11.82□□□□□ -0.52
RPAIN-204ENST00000405578 F2P00734 622 aa11.82□□□□□ -0.52
RPAIN-204ENST00000405578 ZNF286BP0CG31 522 aa11.82□□□□□ -0.52
RPAIN-204ENST00000405578 DDIT3P35638 169 aa11.82□□□□□ -0.52
RPAIN-204ENST00000405578 TECP42680 631 aa11.82□□□□□ -0.52
RPAIN-204ENST00000405578 FXR2P51116 673 aaKnown RBP eCLIP11.82□□□□□ -0.52
RPAIN-204ENST00000405578 STAT5BP51692 787 aa11.82□□□□□ -0.52
RPAIN-204ENST00000405578 CHMP4BP1P59074 171 aa11.82□□□□□ -0.52
RPAIN-204ENST00000405578 EPHA7Q15375 998 aa11.82□□□□□ -0.52
RPAIN-204ENST00000405578 HAUS3Q68CZ6 603 aa11.82□□□□□ -0.52
RPAIN-204ENST00000405578 SWSAP1Q6NVH7 229 aa11.82□□□□□ -0.52
RPAIN-204ENST00000405578 PDXDC2PQ6P474 469 aa11.82□□□□□ -0.52
RPAIN-204ENST00000405578 PLPPR4Q7Z2D5 763 aa11.82□□□□□ -0.52
RPAIN-204ENST00000405578 CKAP2LQ8IYA6 745 aa11.82□□□□□ -0.52
RPAIN-204ENST00000405578 C7orf31Q8N865 590 aa11.82□□□□□ -0.52
RPAIN-204ENST00000405578 PRSS33Q8NF86 280 aa11.82□□□□□ -0.52
RPAIN-204ENST00000405578 NEK9Q8TD19 979 aa11.82□□□□□ -0.52
RPAIN-204ENST00000405578 KCNG4Q8TDN1 519 aa11.82□□□□□ -0.52
RPAIN-204ENST00000405578 GJA10Q969M2 543 aa11.82□□□□□ -0.52
RPAIN-204ENST00000405578 MFSD14AQ96MC6 490 aa11.82□□□□□ -0.52
RPAIN-204ENST00000405578 TUT1Q9H6E5 874 aaKnown RBP11.82□□□□□ -0.52
RPAIN-204ENST00000405578 ZNF302Q9NR11 478 aa11.82□□□□□ -0.52
RPAIN-204ENST00000405578 LRWD1Q9UFC0 647 aa11.82□□□□□ -0.52
RPAIN-204ENST00000405578 VAV3Q9UKW4 847 aa11.82□□□□□ -0.52
RPAIN-204ENST00000405578 NOD1Q9Y239 953 aa11.82□□□□□ -0.52
RPAIN-204ENST00000405578 USP34Q70CQ2 3546 aa11.82□□□□□ -0.52
RPAIN-204ENST00000405578 EMSYQ7Z589 1322 aa11.82□□□□□ -0.52
RPAIN-204ENST00000405578 LGR5O75473 907 aa11.81□□□□□ -0.52
RPAIN-204ENST00000405578 GJB5O95377 273 aa11.81□□□□□ -0.52
RPAIN-204ENST00000405578 YEATS4O95619 227 aa11.81□□□□□ -0.52
RPAIN-204ENST00000405578 P4HBP07237 508 aaKnown RBP11.81□□□□□ -0.52
RPAIN-204ENST00000405578 GNAT1P11488 350 aa11.81□□□□□ -0.52
RPAIN-204ENST00000405578 NASPP49321 788 aaPredicted RBP11.81□□□□□ -0.52
RPAIN-204ENST00000405578 PSEN2P49810 448 aa11.81□□□□□ -0.52
RPAIN-204ENST00000405578 SLC39A14Q15043 492 aa11.81□□□□□ -0.52
RPAIN-204ENST00000405578 KRT79Q5XKE5 535 aa11.81□□□□□ -0.52
RPAIN-204ENST00000405578 FAM117BQ6P1L5 589 aa11.81□□□□□ -0.52
RPAIN-204ENST00000405578 EP400NLQ6ZTU2 488 aa11.81□□□□□ -0.52
RPAIN-204ENST00000405578 C4orf32Q8N8J7 132 aa11.81□□□□□ -0.52
RPAIN-204ENST00000405578 FBXO22Q8NEZ5 403 aa11.81□□□□□ -0.52
RPAIN-204ENST00000405578 FAM167AQ96KS9 214 aa11.81□□□□□ -0.52
RPAIN-204ENST00000405578 AK8Q96MA6 479 aa11.81□□□□□ -0.52
RPAIN-204ENST00000405578 USP28Q96RU2 1077 aa11.81□□□□□ -0.52
RPAIN-204ENST00000405578 NRBP2Q9NSY0 501 aa11.81□□□□□ -0.52
RPAIN-204ENST00000405578 TFIP11Q9UBB9 837 aaKnown RBP11.81□□□□□ -0.52
RPAIN-204ENST00000405578 GABBR1Q9UBS5 961 aa11.81□□□□□ -0.52
RPAIN-204ENST00000405578 TRPC6Q9Y210 931 aa11.81□□□□□ -0.52
RPAIN-204ENST00000405578 ZDHHC9Q9Y397 364 aa11.81□□□□□ -0.52
RPAIN-204ENST00000405578 CLIC4Q9Y696 253 aa11.81□□□□□ -0.52
RPAIN-204ENST00000405578 MORC2Q9Y6X9 1032 aaPredicted RBP11.81□□□□□ -0.52
RPAIN-204ENST00000405578 IGKV6D-21A0A0A0MT36 114 aa11.8□□□□□ -0.52
RPAIN-204ENST00000405578 VWA3AA6NCI4 1184 aa11.8□□□□□ -0.52
RPAIN-204ENST00000405578 C19orf67A6NJJ6 358 aa11.8□□□□□ -0.52
RPAIN-204ENST00000405578 RBAK-RBAKDNI3L0D1 243 aa11.8□□□□□ -0.52
RPAIN-204ENST00000405578 SPTLC2O15270 562 aa11.8□□□□□ -0.52
RPAIN-204ENST00000405578 LONP1P36776 959 aaKnown RBP11.8□□□□□ -0.52
RPAIN-204ENST00000405578 TXLNAP40222 546 aa11.8□□□□□ -0.52
RPAIN-204ENST00000405578 QARSP47897 775 aaKnown RBP11.8□□□□□ -0.52
RPAIN-204ENST00000405578 PSMC5P62195 406 aa11.8□□□□□ -0.52
RPAIN-204ENST00000405578 DNM1Q05193 864 aaKnown RBP11.8□□□□□ -0.52
RPAIN-204ENST00000405578 PTPN11Q06124 597 aaPredicted RBP11.8□□□□□ -0.52
RPAIN-204ENST00000405578 MFSD10Q14728 455 aa11.8□□□□□ -0.52
RPAIN-204ENST00000405578 GPNMBQ14956 572 aa11.8□□□□□ -0.52
RPAIN-204ENST00000405578 KIAA0753Q2KHM9 967 aa11.8□□□□□ -0.52
RPAIN-204ENST00000405578 NFRKBQ6P4R8 1299 aa11.8□□□□□ -0.52
RPAIN-204ENST00000405578 CNKSR3Q6P9H4 555 aa11.8□□□□□ -0.52
RPAIN-204ENST00000405578 B3GNT9Q6UX72 402 aa11.8□□□□□ -0.52
RPAIN-204ENST00000405578 KRI1Q8N9T8 703 aaKnown RBP11.8□□□□□ -0.52
RPAIN-204ENST00000405578 AFAP1L1Q8TED9 768 aa11.8□□□□□ -0.52
RPAIN-204ENST00000405578 RAD9AQ99638 391 aa11.8□□□□□ -0.52
RPAIN-204ENST00000405578 C17orf80Q9BSJ5 609 aa11.8□□□□□ -0.52
RPAIN-204ENST00000405578 C16orf70Q9BSU1 422 aa11.8□□□□□ -0.52
RPAIN-204ENST00000405578 SCAND2PQ9GZW5 306 aaPredicted RBP11.8□□□□□ -0.52
RPAIN-204ENST00000405578 ZSWIM4Q9H7M6 989 aa11.8□□□□□ -0.52
RPAIN-204ENST00000405578 PRKAG3Q9UGI9 489 aa11.8□□□□□ -0.52
RPAIN-204ENST00000405578 MUTYHQ9UIF7 546 aa11.8□□□□□ -0.52
RPAIN-204ENST00000405578 FAM50BQ9Y247 325 aa11.8□□□□□ -0.52
RPAIN-204ENST00000405578 SRPRBQ9Y5M8 271 aaKnown RBP11.8□□□□□ -0.52
RPAIN-204ENST00000405578 PLXNA3P51805 1871 aa11.8□□□□□ -0.52
RPAIN-204ENST00000405578 POTEMA6NI47 508 aa11.79□□□□□ -0.52
RPAIN-204ENST00000405578 RRN3P2A6NIE6 340 aa11.79□□□□□ -0.52
RPAIN-204ENST00000405578 PPP6R2O75170 966 aa11.79□□□□□ -0.52
RPAIN-204ENST00000405578 MARK3P27448 753 aa11.79□□□□□ -0.52
RPAIN-204ENST00000405578 MARCKSP29966 332 aaPredicted RBP11.79□□□□□ -0.52
RPAIN-204ENST00000405578 IRS1P35568 1242 aa11.79□□□□□ -0.52
RPAIN-204ENST00000405578 UBA7P41226 1012 aa11.79□□□□□ -0.52
RPAIN-204ENST00000405578 ME1P48163 572 aa11.79□□□□□ -0.52
RPAIN-204ENST00000405578 PTPN5P54829 565 aa11.79□□□□□ -0.52
RPAIN-204ENST00000405578 SPIRE1Q08AE8 756 aa11.79□□□□□ -0.52
RPAIN-204ENST00000405578 PTPAQ15257 358 aa11.79□□□□□ -0.52
RPAIN-204ENST00000405578 TCTN1Q2MV58 587 aa11.79□□□□□ -0.52
RPAIN-204ENST00000405578 TIGD5Q53EQ6 642 aa11.79□□□□□ -0.52
RPAIN-204ENST00000405578 XKR3Q5GH77 459 aa11.79□□□□□ -0.52
RPAIN-204ENST00000405578 LRRC8DQ7L1W4 858 aa11.79□□□□□ -0.52
RPAIN-204ENST00000405578 OTUD6AQ7L8S5 288 aa11.79□□□□□ -0.52
RPAIN-204ENST00000405578 TRIM50Q86XT4 487 aa11.79□□□□□ -0.52
RPAIN-204ENST00000405578 CCDC60Q8IWA6 550 aaPredicted RBP11.79□□□□□ -0.52
RPAIN-204ENST00000405578 TPH2Q8IWU9 490 aa11.79□□□□□ -0.52
RPAIN-204ENST00000405578 ADHFE1Q8IWW8 467 aa11.79□□□□□ -0.52
RPAIN-204ENST00000405578 CCDC155Q8N6L0 562 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms