RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 ZEB2O60315 1214 aa16.52■□□□□ 0.23
CAPN3-207ENST00000397200 CCL5P13501 91 aa16.52■□□□□ 0.23
CAPN3-207ENST00000397200 NKX3-2P78367 333 aa16.52■□□□□ 0.23
CAPN3-207ENST00000397200 IRX5P78411 483 aaPredicted RBP16.52■□□□□ 0.23
CAPN3-207ENST00000397200 PRKCEQ02156 737 aa16.52■□□□□ 0.23
CAPN3-207ENST00000397200 NR1I3Q14994 352 aa16.52■□□□□ 0.23
CAPN3-207ENST00000397200 MTFR1Q15390 333 aa16.52■□□□□ 0.23
CAPN3-207ENST00000397200 GNASQ5JWF2 1037 aa16.52■□□□□ 0.23
CAPN3-207ENST00000397200 PLPPR4Q7Z2D5 763 aa16.52■□□□□ 0.23
CAPN3-207ENST00000397200 TRIM50Q86XT4 487 aa16.52■□□□□ 0.23
CAPN3-207ENST00000397200 CCDC112Q8NEF3 446 aa16.52■□□□□ 0.23
CAPN3-207ENST00000397200 C7orf25Q9BPX7 421 aa16.52■□□□□ 0.23
CAPN3-207ENST00000397200 RNF208Q9H0X6 261 aa16.52■□□□□ 0.23
CAPN3-207ENST00000397200 MYADML2A6NDP7 307 aa16.51■□□□□ 0.23
CAPN3-207ENST00000397200 E9PMD0 336 aa16.51■□□□□ 0.23
CAPN3-207ENST00000397200 ZNF862O60290 1169 aa16.51■□□□□ 0.23
CAPN3-207ENST00000397200 ADAMTS4O75173 837 aa16.51■□□□□ 0.23
CAPN3-207ENST00000397200 MYCNP04198 464 aaPredicted RBP16.51■□□□□ 0.23
CAPN3-207ENST00000397200 MYL3P08590 195 aa16.51■□□□□ 0.23
CAPN3-207ENST00000397200 ZNF286BP0CG31 522 aa16.51■□□□□ 0.23
CAPN3-207ENST00000397200 SLC26A2P50443 739 aa16.51■□□□□ 0.23
CAPN3-207ENST00000397200 PAK1Q13153 545 aa16.51■□□□□ 0.23
CAPN3-207ENST00000397200 COBLL1Q53SF7 1204 aa16.51■□□□□ 0.23
CAPN3-207ENST00000397200 LHX8Q68G74 356 aa16.51■□□□□ 0.23
CAPN3-207ENST00000397200 KCNK18Q7Z418 384 aa16.51■□□□□ 0.23
CAPN3-207ENST00000397200 PIGOQ8TEQ8 1089 aa16.51■□□□□ 0.23
CAPN3-207ENST00000397200 LARP4BQ92615 738 aaKnown RBP16.51■□□□□ 0.23
CAPN3-207ENST00000397200 RAD54LQ92698 747 aa16.51■□□□□ 0.23
CAPN3-207ENST00000397200 ZNF333Q96JL9 665 aa16.51■□□□□ 0.23
CAPN3-207ENST00000397200 GTPBP4Q9BZE4 634 aaKnown RBP16.51■□□□□ 0.23
CAPN3-207ENST00000397200 PAK6Q9NQU5 681 aaPredicted RBP16.51■□□□□ 0.23
CAPN3-207ENST00000397200 BLOC1S4Q9NUP1 217 aa16.51■□□□□ 0.23
CAPN3-207ENST00000397200 ERAP1Q9NZ08 941 aa16.51■□□□□ 0.23
CAPN3-207ENST00000397200 ZNF215Q9UL58 517 aaPredicted RBP16.51■□□□□ 0.23
CAPN3-207ENST00000397200 CTNND2Q9UQB3 1225 aa16.51■□□□□ 0.23
CAPN3-207ENST00000397200 CENPFP49454 3210 aa16.51■□□□□ 0.23
CAPN3-207ENST00000397200 KPNA6O60684 536 aa16.5■□□□□ 0.23
CAPN3-207ENST00000397200 OATP04181 439 aa16.5■□□□□ 0.23
CAPN3-207ENST00000397200 YWHABP31946 246 aaKnown RBP16.5■□□□□ 0.23
CAPN3-207ENST00000397200 PBX1P40424 430 aa16.5■□□□□ 0.23
CAPN3-207ENST00000397200 PSMC6P62333 389 aa16.5■□□□□ 0.23
CAPN3-207ENST00000397200 XKR3Q5GH77 459 aa16.5■□□□□ 0.23
CAPN3-207ENST00000397200 DNTTIP2Q5QJE6 756 aaKnown RBP16.5■□□□□ 0.23
CAPN3-207ENST00000397200 CNNM4Q6P4Q7 775 aa16.5■□□□□ 0.23
CAPN3-207ENST00000397200 TRMT1LQ7Z2T5 733 aaKnown RBP16.5■□□□□ 0.23
CAPN3-207ENST00000397200 RNF180Q86T96 592 aa16.5■□□□□ 0.23
CAPN3-207ENST00000397200 ADSSL1Q8N142 457 aa16.5■□□□□ 0.23
CAPN3-207ENST00000397200 ARMC5Q96C12 935 aa16.5■□□□□ 0.23
CAPN3-207ENST00000397200 FAM167AQ96KS9 214 aa16.5■□□□□ 0.23
CAPN3-207ENST00000397200 CCDC43Q96MW1 224 aaKnown RBP16.5■□□□□ 0.23
CAPN3-207ENST00000397200 C16orf70Q9BSU1 422 aa16.5■□□□□ 0.23
CAPN3-207ENST00000397200 TRIM9Q9C026 710 aa16.5■□□□□ 0.23
CAPN3-207ENST00000397200 H3BRB1 525 aa16.49■□□□□ 0.23
CAPN3-207ENST00000397200 EYA4O95677 639 aa16.49■□□□□ 0.23
CAPN3-207ENST00000397200 PLA2G4BP0C869 781 aa16.49■□□□□ 0.23
CAPN3-207ENST00000397200 ATP4AP20648 1035 aa16.49■□□□□ 0.23
CAPN3-207ENST00000397200 CDK11BP21127 795 aaKnown RBP16.49■□□□□ 0.23
CAPN3-207ENST00000397200 MARK3P27448 753 aa16.49■□□□□ 0.23
CAPN3-207ENST00000397200 CST5P28325 142 aaPredicted RBP16.49■□□□□ 0.23
CAPN3-207ENST00000397200 KMT5BQ4FZB7 885 aa16.49■□□□□ 0.23
CAPN3-207ENST00000397200 SPECC1LQ69YQ0 1117 aa16.49■□□□□ 0.23
CAPN3-207ENST00000397200 KLHL10Q6JEL2 608 aa16.49■□□□□ 0.23
CAPN3-207ENST00000397200 NYAP1Q6ZVC0 841 aa16.49■□□□□ 0.23
CAPN3-207ENST00000397200 OTUD6AQ7L8S5 288 aa16.49■□□□□ 0.23
CAPN3-207ENST00000397200 CCAR2Q8N163 923 aaKnown RBP16.49■□□□□ 0.23
CAPN3-207ENST00000397200 PCSK9Q8NBP7 692 aaKnown RBP16.49■□□□□ 0.23
CAPN3-207ENST00000397200 KLHDC9Q8NEP7 349 aa16.49■□□□□ 0.23
CAPN3-207ENST00000397200 CTAGE1Q96RT6 745 aa16.49■□□□□ 0.23
CAPN3-207ENST00000397200 TUT1Q9H6E5 874 aaKnown RBP16.49■□□□□ 0.23
CAPN3-207ENST00000397200 NRBP2Q9NSY0 501 aa16.49■□□□□ 0.23
CAPN3-207ENST00000397200 LIMA1Q9UHB6 759 aaKnown RBP16.49■□□□□ 0.23
CAPN3-207ENST00000397200 SEPT9Q9UHD8 586 aaPredicted RBP16.49■□□□□ 0.23
CAPN3-207ENST00000397200 ARID2Q68CP9 1835 aa16.49■□□□□ 0.23
CAPN3-207ENST00000397200 LRRC10BA6NIK2 292 aa16.48■□□□□ 0.23
CAPN3-207ENST00000397200 ZBTB39O15060 712 aa16.48■□□□□ 0.23
CAPN3-207ENST00000397200 SSBP05455 408 aaKnown RBP eCLIP16.48■□□□□ 0.23
CAPN3-207ENST00000397200 GTF2F1P35269 517 aaKnown RBP eCLIP16.48■□□□□ 0.23
CAPN3-207ENST00000397200 PRCPP42785 496 aa16.48■□□□□ 0.23
CAPN3-207ENST00000397200 STX17P56962 302 aa16.48■□□□□ 0.23
CAPN3-207ENST00000397200 SPAG1Q07617 926 aa16.48■□□□□ 0.23
CAPN3-207ENST00000397200 MCM6Q14566 821 aa16.48■□□□□ 0.23
CAPN3-207ENST00000397200 PLCB4Q15147 1175 aa16.48■□□□□ 0.23
CAPN3-207ENST00000397200 SV2BQ7L1I2 683 aa16.48■□□□□ 0.23
CAPN3-207ENST00000397200 MYRIPQ8NFW9 859 aa16.48■□□□□ 0.23
CAPN3-207ENST00000397200 ATP8B4Q8TF62 1192 aa16.48■□□□□ 0.23
CAPN3-207ENST00000397200 NELFBQ8WX92 580 aa16.48■□□□□ 0.23
CAPN3-207ENST00000397200 DEFB118Q96PH6 123 aa16.48■□□□□ 0.23
CAPN3-207ENST00000397200 BHMT2Q9H2M3 363 aa16.48■□□□□ 0.23
CAPN3-207ENST00000397200 ANKEF1Q9NU02 776 aa16.48■□□□□ 0.23
CAPN3-207ENST00000397200 DBR1Q9UK59 544 aaKnown RBP16.48■□□□□ 0.23
CAPN3-207ENST00000397200 TRPC6Q9Y210 931 aa16.48■□□□□ 0.23
CAPN3-207ENST00000397200 GDAQ9Y2T3 454 aa16.48■□□□□ 0.23
CAPN3-207ENST00000397200 ARHGEF35A5YM69 484 aa16.48■□□□□ 0.23
CAPN3-207ENST00000397200 NRDCO43847 1150 aa16.48■□□□□ 0.23
CAPN3-207ENST00000397200 STBD1O95210 358 aa16.48■□□□□ 0.23
CAPN3-207ENST00000397200 F2P00734 622 aa16.48■□□□□ 0.23
CAPN3-207ENST00000397200 PPP1R2P41236 205 aa16.48■□□□□ 0.23
CAPN3-207ENST00000397200 PURAQ00577 322 aaKnown RBP16.48■□□□□ 0.23
CAPN3-207ENST00000397200 LRRC41Q15345 812 aa16.48■□□□□ 0.23
CAPN3-207ENST00000397200 KCNA10Q16322 511 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms