RNA–Protein interactions for RNA: ENST00000397017.6

MCF2L-205, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-205ENST00000397017 DAAM2Q86T65 1068 aa16.57■□□□□ 0.24
MCF2L-205ENST00000397017 IWS1Q96ST2 819 aa16.57■□□□□ 0.24
MCF2L-205ENST00000397017 A1CFQ9NQ94 594 aaKnown RBP16.57■□□□□ 0.24
MCF2L-205ENST00000397017 BCCIPQ9P287 314 aaKnown RBP eCLIP16.57■□□□□ 0.24
MCF2L-205ENST00000397017 PACSIN2Q9UNF0 486 aaPredicted RBP16.57■□□□□ 0.24
MCF2L-205ENST00000397017 KCNK3O14649 394 aa16.57■□□□□ 0.24
MCF2L-205ENST00000397017 PRKCEQ02156 737 aa16.57■□□□□ 0.24
MCF2L-205ENST00000397017 FAM160B1Q5W0V3 765 aa16.57■□□□□ 0.24
MCF2L-205ENST00000397017 SESTD1Q86VW0 696 aa16.57■□□□□ 0.24
MCF2L-205ENST00000397017 TRIM50Q86XT4 487 aa16.57■□□□□ 0.24
MCF2L-205ENST00000397017 GMLQ99445 158 aa16.57■□□□□ 0.24
MCF2L-205ENST00000397017 TUFT1Q9NNX1 390 aa16.57■□□□□ 0.24
MCF2L-205ENST00000397017 NXF1Q9UBU9 619 aaKnown RBP16.57■□□□□ 0.24
MCF2L-205ENST00000397017 MYO6Q9UM54 1294 aa16.57■□□□□ 0.24
MCF2L-205ENST00000397017 DUOX1Q9NRD9 1551 aa16.56■□□□□ 0.24
MCF2L-205ENST00000397017 CCL15-CCL14A0A0B4J2E2 113 aa16.56■□□□□ 0.24
MCF2L-205ENST00000397017 CCL15Q16663 113 aa16.56■□□□□ 0.24
MCF2L-205ENST00000397017 SCARA5Q6ZMJ2 495 aa16.56■□□□□ 0.24
MCF2L-205ENST00000397017 CCDC50Q8IVM0 306 aa16.56■□□□□ 0.24
MCF2L-205ENST00000397017 COL20A1Q9P218 1284 aa16.56■□□□□ 0.24
MCF2L-205ENST00000397017 DNAJC12Q9UKB3 198 aa16.56■□□□□ 0.24
MCF2L-205ENST00000397017 PGM5Q15124 567 aa16.56■□□□□ 0.24
MCF2L-205ENST00000397017 CDKAL1Q5VV42 579 aa16.56■□□□□ 0.24
MCF2L-205ENST00000397017 PEX26Q7Z412 305 aa16.56■□□□□ 0.24
MCF2L-205ENST00000397017 ZBTB8OSQ8IWT0 167 aa16.56■□□□□ 0.24
MCF2L-205ENST00000397017 RANBP17Q9H2T7 1088 aaKnown RBP16.56■□□□□ 0.24
MCF2L-205ENST00000397017 SLC38A10Q9HBR0 1119 aa16.56■□□□□ 0.24
MCF2L-205ENST00000397017 PXMP2Q9NR77 195 aa16.56■□□□□ 0.24
MCF2L-205ENST00000397017 CHORDC1Q9UHD1 332 aaPredicted RBP16.56■□□□□ 0.24
MCF2L-205ENST00000397017 NWD2Q9ULI1 1742 aa16.56■□□□□ 0.24
MCF2L-205ENST00000397017 COL22A1Q8NFW1 1626 aaPredicted RBP16.56■□□□□ 0.24
MCF2L-205ENST00000397017 IQCA1LA6NCM1 817 aa16.56■□□□□ 0.24
MCF2L-205ENST00000397017 XXYLT1Q8NBI6 393 aa16.56■□□□□ 0.24
MCF2L-205ENST00000397017 MED15Q96RN5 788 aa16.56■□□□□ 0.24
MCF2L-205ENST00000397017 FBXO40Q9UH90 709 aa16.56■□□□□ 0.24
MCF2L-205ENST00000397017 FAM184BQ9ULE4 1060 aa16.56■□□□□ 0.24
MCF2L-205ENST00000397017 DUSP10Q9Y6W6 482 aa16.56■□□□□ 0.24
MCF2L-205ENST00000397017 TFRCP02786 760 aaKnown RBP16.55■□□□□ 0.24
MCF2L-205ENST00000397017 STAT5BP51692 787 aa16.55■□□□□ 0.24
MCF2L-205ENST00000397017 HUNKP57058 714 aa16.55■□□□□ 0.24
MCF2L-205ENST00000397017 TMEM62Q0P6H9 643 aa16.55■□□□□ 0.24
MCF2L-205ENST00000397017 TREML2Q5T2D2 321 aa16.55■□□□□ 0.24
MCF2L-205ENST00000397017 FBXO16Q8IX29 292 aaPredicted RBP16.55■□□□□ 0.24
MCF2L-205ENST00000397017 GOLGA5Q8TBA6 731 aa16.55■□□□□ 0.24
MCF2L-205ENST00000397017 FAM84AQ96KN4 292 aa16.55■□□□□ 0.24
MCF2L-205ENST00000397017 PCDHA13Q9Y5I0 950 aa16.55■□□□□ 0.24
MCF2L-205ENST00000397017 EMSYQ7Z589 1322 aa16.55■□□□□ 0.24
MCF2L-205ENST00000397017 NCK2O43639 380 aa16.55■□□□□ 0.24
MCF2L-205ENST00000397017 SEC31AO94979 1220 aaKnown RBP16.55■□□□□ 0.24
MCF2L-205ENST00000397017 H2AFZP0C0S5 128 aa16.55■□□□□ 0.24
MCF2L-205ENST00000397017 ACTR2P61160 394 aa16.55■□□□□ 0.24
MCF2L-205ENST00000397017 IFI16Q16666 785 aaKnown RBP16.55■□□□□ 0.24
MCF2L-205ENST00000397017 H2AFVQ71UI9 128 aa16.55■□□□□ 0.24
MCF2L-205ENST00000397017 GOLPH3Q9H4A6 298 aa16.55■□□□□ 0.24
MCF2L-205ENST00000397017 TMEM206Q9H813 350 aa16.55■□□□□ 0.24
MCF2L-205ENST00000397017 ST7Q9NRC1 585 aa16.55■□□□□ 0.24
MCF2L-205ENST00000397017 DSG3P32926 999 aa16.55■□□□□ 0.24
MCF2L-205ENST00000397017 CKAP4Q07065 602 aaKnown RBP16.55■□□□□ 0.24
MCF2L-205ENST00000397017 TMEM132BQ14DG7 1078 aa16.55■□□□□ 0.24
MCF2L-205ENST00000397017 DNAJC21Q5F1R6 531 aaKnown RBP16.55■□□□□ 0.24
MCF2L-205ENST00000397017 RIT2Q99578 217 aa16.55■□□□□ 0.24
MCF2L-205ENST00000397017 EFCC1Q9HA90 598 aa16.55■□□□□ 0.24
MCF2L-205ENST00000397017 KCNMB3Q9NPA1 279 aa16.55■□□□□ 0.24
MCF2L-205ENST00000397017 NOD1Q9Y239 953 aa16.55■□□□□ 0.24
MCF2L-205ENST00000397017 ERVK-24P63145 666 aa16.54■□□□□ 0.24
MCF2L-205ENST00000397017 RETREG2Q8NC44 543 aa16.54■□□□□ 0.24
MCF2L-205ENST00000397017 UPF1Q92900 1129 aaKnown RBP eCLIP16.54■□□□□ 0.243e-8■■■□□ 17
MCF2L-205ENST00000397017 KLRG1Q96E93 195 aa16.54■□□□□ 0.24
MCF2L-205ENST00000397017 CBWD1Q9BRT8 395 aa16.54■□□□□ 0.24
MCF2L-205ENST00000397017 TSGA10Q9BZW7 698 aa16.54■□□□□ 0.24
MCF2L-205ENST00000397017 ATP6V0A4Q9HBG4 840 aa16.54■□□□□ 0.24
MCF2L-205ENST00000397017 NCBP1Q09161 790 aaKnown RBP16.54■□□□□ 0.24
MCF2L-205ENST00000397017 C1orf112Q9NSG2 853 aa16.54■□□□□ 0.24
MCF2L-205ENST00000397017 SHANK3Q9BYB0 1731 aa16.54■□□□□ 0.24
MCF2L-205ENST00000397017 AKAP3O75969 853 aa16.54■□□□□ 0.24
MCF2L-205ENST00000397017 CTNNA2P26232 953 aa16.54■□□□□ 0.24
MCF2L-205ENST00000397017 PIK3CAP42336 1068 aa16.54■□□□□ 0.24
MCF2L-205ENST00000397017 LY6KQ17RY6 165 aa16.54■□□□□ 0.24
MCF2L-205ENST00000397017 Q4G0T1 1027 aa16.54■□□□□ 0.24
MCF2L-205ENST00000397017 CENPPQ6IPU0 288 aa16.54■□□□□ 0.24
MCF2L-205ENST00000397017 ALKBH5Q6P6C2 394 aaKnown RBP16.54■□□□□ 0.24
MCF2L-205ENST00000397017 ERO1BQ86YB8 467 aa16.54■□□□□ 0.24
MCF2L-205ENST00000397017 CDCA5Q96FF9 252 aa16.54■□□□□ 0.24
MCF2L-205ENST00000397017 MMS19Q96T76 1030 aa16.54■□□□□ 0.24
MCF2L-205ENST00000397017 MSTO1Q9BUK6 570 aa16.54■□□□□ 0.24
MCF2L-205ENST00000397017 FHOD1Q9Y613 1164 aa16.54■□□□□ 0.24
MCF2L-205ENST00000397017 GJC2Q5T442 439 aaPredicted RBP16.53■□□□□ 0.24
MCF2L-205ENST00000397017 RNF149Q8NC42 400 aa16.53■□□□□ 0.24
MCF2L-205ENST00000397017 TTC16Q8NEE8 873 aa16.53■□□□□ 0.24
MCF2L-205ENST00000397017 CCDC113Q9H0I3 377 aa16.53■□□□□ 0.24
MCF2L-205ENST00000397017 RPS6KA1Q15418 735 aa16.53■□□□□ 0.24
MCF2L-205ENST00000397017 LRRC15Q8TF66 581 aa16.53■□□□□ 0.24
MCF2L-205ENST00000397017 NLRP7Q8WX94 980 aa16.53■□□□□ 0.24
MCF2L-205ENST00000397017 CEP63Q96MT8 703 aa16.53■□□□□ 0.24
MCF2L-205ENST00000397017 MOV10L1Q9BXT6 1211 aaKnown RBP16.53■□□□□ 0.24
MCF2L-205ENST00000397017 RRAGCQ9HB90 399 aa16.53■□□□□ 0.24
MCF2L-205ENST00000397017 CAPN11Q9UMQ6 739 aa16.53■□□□□ 0.24
MCF2L-205ENST00000397017 RNF225M0QZC1 329 aaPredicted RBP16.53■□□□□ 0.24
MCF2L-205ENST00000397017 TUBB4AP04350 444 aa16.53■□□□□ 0.24
MCF2L-205ENST00000397017 TMEM191BP0C7N4 346 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms