RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 MIIPQ5JXC2 388 aa17.34■□□□□ 0.37
SMARCD1-202ENST00000394963 MCTP2Q6DN12 878 aa17.34■□□□□ 0.37
SMARCD1-202ENST00000394963 ALKBH5Q6P6C2 394 aaKnown RBP17.34■□□□□ 0.37
SMARCD1-202ENST00000394963 PI4K2AQ9BTU6 479 aa17.34■□□□□ 0.37
SMARCD1-202ENST00000394963 MRIQ9BWK5 157 aa17.34■□□□□ 0.37
SMARCD1-202ENST00000394963 ACP6Q9NPH0 428 aa17.34■□□□□ 0.37
SMARCD1-202ENST00000394963 TYW1Q9NV66 732 aaKnown RBP17.34■□□□□ 0.37
SMARCD1-202ENST00000394963 VWA5AO00534 786 aa17.33■□□□□ 0.37
SMARCD1-202ENST00000394963 CLK2P49760 499 aaKnown RBP17.33■□□□□ 0.37
SMARCD1-202ENST00000394963 GUCY2FP51841 1108 aa17.33■□□□□ 0.37
SMARCD1-202ENST00000394963 LPAR1Q92633 364 aa17.33■□□□□ 0.37
SMARCD1-202ENST00000394963 VPS18Q9P253 973 aa17.33■□□□□ 0.37
SMARCD1-202ENST00000394963 WRAP73Q9P2S5 460 aaPredicted RBP17.33■□□□□ 0.37
SMARCD1-202ENST00000394963 CAPN6Q9Y6Q1 641 aa17.33■□□□□ 0.37
SMARCD1-202ENST00000394963 EMSYQ7Z589 1322 aa17.33■□□□□ 0.36
SMARCD1-202ENST00000394963 PALMO75781 387 aa17.33■□□□□ 0.36
SMARCD1-202ENST00000394963 CALCAP01258 141 aa17.33■□□□□ 0.36
SMARCD1-202ENST00000394963 WDR59Q6PJI9 974 aa17.33■□□□□ 0.36
SMARCD1-202ENST00000394963 PDCD2LQ9BRP1 358 aa17.33■□□□□ 0.36
SMARCD1-202ENST00000394963 TEX13BQ9BXU2 312 aa17.33■□□□□ 0.36
SMARCD1-202ENST00000394963 LRP5O75197 1615 aa17.33■□□□□ 0.36
SMARCD1-202ENST00000394963 MYH1P12882 1939 aa17.33■□□□□ 0.36
SMARCD1-202ENST00000394963 A0A087X0T9 212 aa17.33■□□□□ 0.36
SMARCD1-202ENST00000394963 A0A1W2PQC6 194 aa17.33■□□□□ 0.36
SMARCD1-202ENST00000394963 FAM228BP0C875 321 aa17.33■□□□□ 0.36
SMARCD1-202ENST00000394963 PTPRAP18433 802 aa17.33■□□□□ 0.36
SMARCD1-202ENST00000394963 LMAN1P49257 510 aa17.33■□□□□ 0.36
SMARCD1-202ENST00000394963 C9orf131Q5VYM1 1079 aa17.33■□□□□ 0.36
SMARCD1-202ENST00000394963 UBE2Q2Q8WVN8 375 aa17.33■□□□□ 0.36
SMARCD1-202ENST00000394963 MMS19Q96T76 1030 aa17.33■□□□□ 0.36
SMARCD1-202ENST00000394963 AP1M1Q9BXS5 423 aa17.33■□□□□ 0.36
SMARCD1-202ENST00000394963 SMIM23A6NLE4 172 aa17.32■□□□□ 0.36
SMARCD1-202ENST00000394963 INO80B-WBP1J3KQ70 363 aa17.32■□□□□ 0.36
SMARCD1-202ENST00000394963 VAV2P52735 878 aa17.32■□□□□ 0.36
SMARCD1-202ENST00000394963 HERVK_113P62684 666 aa17.32■□□□□ 0.36
SMARCD1-202ENST00000394963 SETQ01105 290 aaPredicted RBP17.32■□□□□ 0.36
SMARCD1-202ENST00000394963 PEX26Q7Z412 305 aa17.32■□□□□ 0.36
SMARCD1-202ENST00000394963 TRIM50Q86XT4 487 aa17.32■□□□□ 0.36
SMARCD1-202ENST00000394963 INO80BQ9C086 356 aaPredicted RBP17.32■□□□□ 0.36
SMARCD1-202ENST00000394963 ACAD9Q9H845 621 aa17.32■□□□□ 0.36
SMARCD1-202ENST00000394963 USTQ9Y2C2 406 aa17.32■□□□□ 0.36
SMARCD1-202ENST00000394963 UCHL3P15374 230 aa17.32■□□□□ 0.36
SMARCD1-202ENST00000394963 KCTD2Q14681 263 aa17.32■□□□□ 0.36
SMARCD1-202ENST00000394963 RETREG2Q8NC44 543 aa17.32■□□□□ 0.36
SMARCD1-202ENST00000394963 HOXC10Q9NYD6 342 aa17.32■□□□□ 0.36
SMARCD1-202ENST00000394963 MRFAP1Q9Y605 127 aa17.32■□□□□ 0.36
SMARCD1-202ENST00000394963 IVNS1ABPQ9Y6Y0 642 aa17.32■□□□□ 0.36
SMARCD1-202ENST00000394963 ORC2Q13416 577 aaPredicted RBP17.32■□□□□ 0.36
SMARCD1-202ENST00000394963 DRAP1Q14919 205 aaPredicted RBP17.32■□□□□ 0.36
SMARCD1-202ENST00000394963 MAP1SQ66K74 1059 aaPredicted RBP17.32■□□□□ 0.36
SMARCD1-202ENST00000394963 SLC7A3Q8WY07 619 aa17.32■□□□□ 0.36
SMARCD1-202ENST00000394963 GMLQ99445 158 aa17.32■□□□□ 0.36
SMARCD1-202ENST00000394963 GAP43P17677 238 aa17.31■□□□□ 0.36
SMARCD1-202ENST00000394963 UGCGQ16739 394 aa17.31■□□□□ 0.36
SMARCD1-202ENST00000394963 APOBEC3FQ8IUX4 373 aaKnown RBP17.31■□□□□ 0.36
SMARCD1-202ENST00000394963 LRRC71Q8N4P6 559 aa17.31■□□□□ 0.36
SMARCD1-202ENST00000394963 METTL14Q9HCE5 456 aaKnown RBP17.31■□□□□ 0.36
SMARCD1-202ENST00000394963 PCDHA10Q9Y5I2 948 aa17.31■□□□□ 0.36
SMARCD1-202ENST00000394963 CNTNAP1P78357 1384 aa17.31■□□□□ 0.36
SMARCD1-202ENST00000394963 THNSL1Q8IYQ7 743 aa17.31■□□□□ 0.36
SMARCD1-202ENST00000394963 TXLNBQ8N3L3 684 aa17.31■□□□□ 0.36
SMARCD1-202ENST00000394963 TRIM58Q8NG06 486 aa17.31■□□□□ 0.36
SMARCD1-202ENST00000394963 ATP6V0A1Q93050 837 aa17.31■□□□□ 0.36
SMARCD1-202ENST00000394963 TUBB4AP04350 444 aa17.31■□□□□ 0.36
SMARCD1-202ENST00000394963 CD58P19256 250 aa17.31■□□□□ 0.36
SMARCD1-202ENST00000394963 MXI1P50539 228 aa17.31■□□□□ 0.36
SMARCD1-202ENST00000394963 PTK2Q05397 1052 aa17.31■□□□□ 0.36
SMARCD1-202ENST00000394963 IQCEQ6IPM2 695 aa17.31■□□□□ 0.36
SMARCD1-202ENST00000394963 C8orf74Q6P047 294 aa17.31■□□□□ 0.36
SMARCD1-202ENST00000394963 PDXDC1Q6P996 788 aa17.31■□□□□ 0.36
SMARCD1-202ENST00000394963 LENG9Q96B70 501 aa17.31■□□□□ 0.36
SMARCD1-202ENST00000394963 RANBP17Q9H2T7 1088 aaKnown RBP17.31■□□□□ 0.36
SMARCD1-202ENST00000394963 TOPORSQ9NS56 1045 aaPredicted RBP17.31■□□□□ 0.36
SMARCD1-202ENST00000394963 LRRC10BA6NIK2 292 aa17.3■□□□□ 0.36
SMARCD1-202ENST00000394963 IRF6O14896 467 aa17.3■□□□□ 0.36
SMARCD1-202ENST00000394963 TBX3O15119 743 aa17.3■□□□□ 0.36
SMARCD1-202ENST00000394963 H2AFZP0C0S5 128 aa17.3■□□□□ 0.36
SMARCD1-202ENST00000394963 ITGB3BPQ13352 177 aaPredicted RBP17.3■□□□□ 0.36
SMARCD1-202ENST00000394963 PGM5Q15124 567 aa17.3■□□□□ 0.36
SMARCD1-202ENST00000394963 Q4G0T1 1027 aa17.3■□□□□ 0.36
SMARCD1-202ENST00000394963 LRRC55Q6ZSA7 311 aa17.3■□□□□ 0.36
SMARCD1-202ENST00000394963 H2AFVQ71UI9 128 aa17.3■□□□□ 0.36
SMARCD1-202ENST00000394963 SND1Q7KZF4 910 aaKnown RBP eCLIP17.3■□□□□ 0.36
SMARCD1-202ENST00000394963 PASD1Q8IV76 773 aa17.3■□□□□ 0.36
SMARCD1-202ENST00000394963 SLC10A4Q96EP9 437 aa17.3■□□□□ 0.36
SMARCD1-202ENST00000394963 ACCSQ96QU6 501 aa17.3■□□□□ 0.36
SMARCD1-202ENST00000394963 JPH1Q9HDC5 661 aaPredicted RBP17.3■□□□□ 0.36
SMARCD1-202ENST00000394963 PLCB1Q9NQ66 1216 aa17.3■□□□□ 0.36
SMARCD1-202ENST00000394963 TELO2Q9Y4R8 837 aa17.3■□□□□ 0.36
SMARCD1-202ENST00000394963 SMCHD1A6NHR9 2005 aa17.3■□□□□ 0.36
SMARCD1-202ENST00000394963 TADA3O75528 432 aa17.3■□□□□ 0.36
SMARCD1-202ENST00000394963 LMNB1P20700 586 aa17.3■□□□□ 0.36
SMARCD1-202ENST00000394963 FKBP1AP62942 108 aaKnown RBP17.3■□□□□ 0.36
SMARCD1-202ENST00000394963 CKAP4Q07065 602 aaKnown RBP17.3■□□□□ 0.36
SMARCD1-202ENST00000394963 MESDQ14696 234 aa17.3■□□□□ 0.36
SMARCD1-202ENST00000394963 RPS6KA1Q15418 735 aa17.3■□□□□ 0.36
SMARCD1-202ENST00000394963 STXBP2Q15833 593 aa17.3■□□□□ 0.36
SMARCD1-202ENST00000394963 ZNF507Q8TCN5 953 aa17.3■□□□□ 0.36
SMARCD1-202ENST00000394963 COG1Q8WTW3 980 aa17.3■□□□□ 0.36
SMARCD1-202ENST00000394963 KLRC1P26715 233 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms