RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 JPH1Q9HDC5 661 aaPredicted RBP11.04□□□□□ -0.64
IFT88-203ENST00000389373 JADE2Q9NQC1 790 aa11.04□□□□□ -0.64
IFT88-203ENST00000389373 UBIAD1Q9Y5Z9 338 aa11.04□□□□□ -0.64
IFT88-203ENST00000389373 MYO10Q9HD67 2058 aa11.04□□□□□ -0.64
IFT88-203ENST00000389373 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.03□□□□□ -0.64
IFT88-203ENST00000389373 EPCAMP16422 314 aa11.03□□□□□ -0.64
IFT88-203ENST00000389373 ACTR2P61160 394 aa11.03□□□□□ -0.64
IFT88-203ENST00000389373 FAM189BP81408 668 aa11.03□□□□□ -0.64
IFT88-203ENST00000389373 TDGQ13569 410 aa11.03□□□□□ -0.64
IFT88-203ENST00000389373 UBE2SQ16763 222 aa11.03□□□□□ -0.64
IFT88-203ENST00000389373 KIZQ2M2Z5 673 aa11.03□□□□□ -0.64
IFT88-203ENST00000389373 SPECC1Q5M775 1068 aa11.03□□□□□ -0.64
IFT88-203ENST00000389373 CATIPQ7Z7H3 387 aa11.03□□□□□ -0.64
IFT88-203ENST00000389373 FAM228AQ86W67 206 aa11.03□□□□□ -0.64
IFT88-203ENST00000389373 KIAA0319LQ8IZA0 1049 aa11.03□□□□□ -0.64
IFT88-203ENST00000389373 DCLK2Q8N568 766 aa11.03□□□□□ -0.64
IFT88-203ENST00000389373 FEZF2Q8TBJ5 459 aa11.03□□□□□ -0.64
IFT88-203ENST00000389373 SDF4Q9BRK5 362 aa11.03□□□□□ -0.64
IFT88-203ENST00000389373 SEMA4AQ9H3S1 761 aa11.03□□□□□ -0.64
IFT88-203ENST00000389373 ELAC1Q9H777 363 aaKnown RBP11.03□□□□□ -0.64
IFT88-203ENST00000389373 PSTPIP2Q9H939 334 aa11.03□□□□□ -0.64
IFT88-203ENST00000389373 SEC63Q9UGP8 760 aaKnown RBP11.03□□□□□ -0.64
IFT88-203ENST00000389373 CACNA1HO95180 2353 aa11.03□□□□□ -0.64
IFT88-203ENST00000389373 SPDYE3A6NKU9 549 aa11.02□□□□□ -0.65
IFT88-203ENST00000389373 DDX39AO00148 427 aaKnown RBP11.02□□□□□ -0.65
IFT88-203ENST00000389373 PIK3CDO00329 1044 aa11.02□□□□□ -0.65
IFT88-203ENST00000389373 BACH1O14867 736 aa11.02□□□□□ -0.65
IFT88-203ENST00000389373 MAFGO15525 162 aa11.02□□□□□ -0.65
IFT88-203ENST00000389373 HOXA2O43364 376 aa11.02□□□□□ -0.65
IFT88-203ENST00000389373 VTNP04004 478 aa11.02□□□□□ -0.65
IFT88-203ENST00000389373 CFHP08603 1231 aa11.02□□□□□ -0.65
IFT88-203ENST00000389373 ZSCAN20P17040 1043 aaPredicted RBP11.02□□□□□ -0.65
IFT88-203ENST00000389373 CRYBB1P53674 252 aaPredicted RBP11.02□□□□□ -0.65
IFT88-203ENST00000389373 PLPPR4Q7Z2D5 763 aa11.02□□□□□ -0.65
IFT88-203ENST00000389373 CABP7Q86V35 215 aa11.02□□□□□ -0.65
IFT88-203ENST00000389373 VPS52Q8N1B4 723 aa11.02□□□□□ -0.65
IFT88-203ENST00000389373 LRRC43Q8N309 656 aa11.02□□□□□ -0.65
IFT88-203ENST00000389373 RNF19AQ9NV58 838 aa11.02□□□□□ -0.65
IFT88-203ENST00000389373 DZANK1Q9NVP4 752 aa11.02□□□□□ -0.65
IFT88-203ENST00000389373 PCDHA6Q9UN73 950 aa11.02□□□□□ -0.65
IFT88-203ENST00000389373 DUSP12Q9UNI6 340 aa11.02□□□□□ -0.65
IFT88-203ENST00000389373 USTQ9Y2C2 406 aa11.02□□□□□ -0.65
IFT88-203ENST00000389373 PCDHA8Q9Y5H6 950 aa11.02□□□□□ -0.65
IFT88-203ENST00000389373 FNDC1Q4ZHG4 1894 aaPredicted RBP11.02□□□□□ -0.65
IFT88-203ENST00000389373 NARSO43776 548 aaKnown RBP11.01□□□□□ -0.65
IFT88-203ENST00000389373 HBP1O60381 514 aa11.01□□□□□ -0.65
IFT88-203ENST00000389373 ALDH7A1P49419 539 aaKnown RBP11.01□□□□□ -0.65
IFT88-203ENST00000389373 TROAPQ12815 778 aa11.01□□□□□ -0.65
IFT88-203ENST00000389373 DSC3Q14574 896 aa11.01□□□□□ -0.65
IFT88-203ENST00000389373 RSPO4Q2I0M5 234 aaPredicted RBP11.01□□□□□ -0.65
IFT88-203ENST00000389373 B4GALNT3Q6L9W6 998 aa11.01□□□□□ -0.65
IFT88-203ENST00000389373 CCDC149Q6ZUS6 474 aa11.01□□□□□ -0.65
IFT88-203ENST00000389373 OTOP3Q7RTS5 596 aa11.01□□□□□ -0.65
IFT88-203ENST00000389373 ECHDC2Q86YB7 292 aa11.01□□□□□ -0.65
IFT88-203ENST00000389373 CKAP2LQ8IYA6 745 aa11.01□□□□□ -0.65
IFT88-203ENST00000389373 SLC39A11Q8N1S5 342 aa11.01□□□□□ -0.65
IFT88-203ENST00000389373 METTL13Q8N6R0 699 aa11.01□□□□□ -0.65
IFT88-203ENST00000389373 HELQQ8TDG4 1101 aa11.01□□□□□ -0.65
IFT88-203ENST00000389373 TMEM169Q96HH4 297 aa11.01□□□□□ -0.65
IFT88-203ENST00000389373 ZNF668Q96K58 619 aaPredicted RBP11.01□□□□□ -0.65
IFT88-203ENST00000389373 MXRA8Q9BRK3 442 aa11.01□□□□□ -0.65
IFT88-203ENST00000389373 MYL10Q9BUA6 226 aa11.01□□□□□ -0.65
IFT88-203ENST00000389373 KCNK12Q9HB15 430 aa11.01□□□□□ -0.65
IFT88-203ENST00000389373 KCNH7Q9NS40 1196 aa11.01□□□□□ -0.65
IFT88-203ENST00000389373 CA14Q9ULX7 337 aa11.01□□□□□ -0.65
IFT88-203ENST00000389373 BAZ2BQ9UIF8 2168 aaKnown RBP11.01□□□□□ -0.65
IFT88-203ENST00000389373 LOXHD1Q8IVV2 1947 aa11.01□□□□□ -0.65
IFT88-203ENST00000389373 SPTBN4Q9H254 2564 aa11□□□□□ -0.65
IFT88-203ENST00000389373 hCG_1642624A0A1W2PR95 340 aa11□□□□□ -0.65
IFT88-203ENST00000389373 HIP1O00291 1037 aa11□□□□□ -0.65
IFT88-203ENST00000389373 DCNP07585 359 aaKnown RBP11□□□□□ -0.65
IFT88-203ENST00000389373 BCAR1P56945 870 aa11□□□□□ -0.65
IFT88-203ENST00000389373 SART3Q15020 963 aaKnown RBP11□□□□□ -0.65
IFT88-203ENST00000389373 FAM160B1Q5W0V3 765 aa11□□□□□ -0.65
IFT88-203ENST00000389373 PDXDC2PQ6P474 469 aa11□□□□□ -0.65
IFT88-203ENST00000389373 RALYLQ86SE5 291 aaKnown RBP11□□□□□ -0.65
IFT88-203ENST00000389373 CTCFLQ8NI51 663 aaPredicted RBP11□□□□□ -0.65
IFT88-203ENST00000389373 RSAD2Q8WXG1 361 aa11□□□□□ -0.65
IFT88-203ENST00000389373 FAM186AA6NE01 2351 aa11□□□□□ -0.65
IFT88-203ENST00000389373 KRBA1A5PL33 1030 aa10.99□□□□□ -0.65
IFT88-203ENST00000389373 ZC3H11AO75152 810 aaKnown RBP eCLIP10.99□□□□□ -0.65
IFT88-203ENST00000389373 GBP2P32456 591 aaPredicted RBP10.99□□□□□ -0.65
IFT88-203ENST00000389373 KIF5BP33176 963 aa10.99□□□□□ -0.65
IFT88-203ENST00000389373 LONRF3Q496Y0 759 aa10.99□□□□□ -0.65
IFT88-203ENST00000389373 ZNF484Q5JVG2 852 aa10.99□□□□□ -0.65
IFT88-203ENST00000389373 CLLU1OSQ5K130 101 aa10.99□□□□□ -0.65
IFT88-203ENST00000389373 ZC3H14Q6PJT7 736 aaKnown RBP10.99□□□□□ -0.65
IFT88-203ENST00000389373 FAM43BQ6ZT52 329 aaPredicted RBP10.99□□□□□ -0.65
IFT88-203ENST00000389373 CMTR1Q8N1G2 835 aaKnown RBP10.99□□□□□ -0.65
IFT88-203ENST00000389373 CCDC82Q8N4S0 544 aa10.99□□□□□ -0.65
IFT88-203ENST00000389373 SLC22A17Q8WUG5 538 aa10.99□□□□□ -0.65
IFT88-203ENST00000389373 RUBCNQ92622 972 aa10.99□□□□□ -0.65
IFT88-203ENST00000389373 PGBD1Q96JS3 809 aa10.99□□□□□ -0.65
IFT88-203ENST00000389373 SPZ1Q9BXG8 430 aa10.99□□□□□ -0.65
IFT88-203ENST00000389373 ZNF302Q9NR11 478 aa10.99□□□□□ -0.65
IFT88-203ENST00000389373 AKT3Q9Y243 479 aa10.99□□□□□ -0.65
IFT88-203ENST00000389373 GPR32O75388 356 aa10.98□□□□□ -0.65
IFT88-203ENST00000389373 PLEKHA8P1O95397 391 aa10.98□□□□□ -0.65
IFT88-203ENST00000389373 SSBP05455 408 aaKnown RBP eCLIP10.98□□□□□ -0.65
IFT88-203ENST00000389373 SP9P0CG40 484 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms