RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 BUB1BO60566 1050 aaPredicted RBP7.69□□□□□ -1.18
CCDC171-201ENST00000380701 INPP5BP32019 993 aa7.69□□□□□ -1.18
CCDC171-201ENST00000380701 NFIXQ14938 502 aa7.69□□□□□ -1.18
CCDC171-201ENST00000380701 DCP1BQ8IZD4 617 aaKnown RBP7.69□□□□□ -1.18
CCDC171-201ENST00000380701 MAP3K14Q99558 947 aa7.69□□□□□ -1.18
CCDC171-201ENST00000380701 ALDH8A1Q9H2A2 487 aaPredicted RBP7.69□□□□□ -1.18
CCDC171-201ENST00000380701 GPBP1L1Q9HC44 474 aaPredicted RBP7.69□□□□□ -1.18
CCDC171-201ENST00000380701 MRGBPQ9NV56 204 aa7.69□□□□□ -1.18
CCDC171-201ENST00000380701 WDR35Q9P2L0 1181 aa7.69□□□□□ -1.18
CCDC171-201ENST00000380701 PPFIA2O75334 1257 aa7.69□□□□□ -1.18
CCDC171-201ENST00000380701 DGAT1O75907 488 aa7.69□□□□□ -1.18
CCDC171-201ENST00000380701 CD4P01730 458 aa7.69□□□□□ -1.18
CCDC171-201ENST00000380701 ZNF18P17022 549 aa7.69□□□□□ -1.18
CCDC171-201ENST00000380701 RAPH1Q70E73 1250 aa7.69□□□□□ -1.18
CCDC171-201ENST00000380701 RNF10Q8N5U6 811 aaKnown RBP7.69□□□□□ -1.18
CCDC171-201ENST00000380701 SPATA33Q96N06 139 aa7.69□□□□□ -1.18
CCDC171-201ENST00000380701 BHMT2Q9H2M3 363 aa7.69□□□□□ -1.18
CCDC171-201ENST00000380701 DCP1AQ9NPI6 582 aaPredicted RBP7.69□□□□□ -1.18
CCDC171-201ENST00000380701 F5H6K3 240 aa7.69□□□□□ -1.18
CCDC171-201ENST00000380701 DNAJC8O75937 253 aaPredicted RBP7.69□□□□□ -1.18
CCDC171-201ENST00000380701 KRT37O76014 449 aa7.69□□□□□ -1.18
CCDC171-201ENST00000380701 SDC4P31431 198 aa7.69□□□□□ -1.18
CCDC171-201ENST00000380701 KLRC3Q07444 240 aa7.69□□□□□ -1.18
CCDC171-201ENST00000380701 CENPUQ71F23 418 aa7.69□□□□□ -1.18
CCDC171-201ENST00000380701 SMAP1Q8IYB5 467 aaPredicted RBP7.69□□□□□ -1.18
CCDC171-201ENST00000380701 OTUD5Q96G74 571 aa7.69□□□□□ -1.18
CCDC171-201ENST00000380701 UBE2TQ9NPD8 197 aaPredicted RBP7.69□□□□□ -1.18
CCDC171-201ENST00000380701 SYNGAP1Q96PV0 1343 aa7.69□□□□□ -1.18
CCDC171-201ENST00000380701 DLC1Q96QB1 1528 aa7.69□□□□□ -1.18
CCDC171-201ENST00000380701 CPDO75976 1380 aa7.69□□□□□ -1.18
CCDC171-201ENST00000380701 RNF17Q9BXT8 1623 aaKnown RBP7.69□□□□□ -1.18
CCDC171-201ENST00000380701 ZBTB7AO95365 584 aa7.69□□□□□ -1.18
CCDC171-201ENST00000380701 GTF2A2P52657 109 aa7.69□□□□□ -1.18
CCDC171-201ENST00000380701 MMEL1Q495T6 779 aa7.69□□□□□ -1.18
CCDC171-201ENST00000380701 FAM173BQ6P4H8 233 aa7.69□□□□□ -1.18
CCDC171-201ENST00000380701 SH3RF3Q8TEJ3 882 aaPredicted RBP7.69□□□□□ -1.18
CCDC171-201ENST00000380701 IRAK4Q9NWZ3 460 aa7.69□□□□□ -1.18
CCDC171-201ENST00000380701 THEGQ9P2T0 379 aa7.69□□□□□ -1.18
CCDC171-201ENST00000380701 SLC9A2Q9UBY0 812 aa7.69□□□□□ -1.18
CCDC171-201ENST00000380701 PPME1Q9Y570 386 aa7.69□□□□□ -1.18
CCDC171-201ENST00000380701 UBE4BO95155 1302 aa7.69□□□□□ -1.18
CCDC171-201ENST00000380701 LAMC1P11047 1609 aa7.69□□□□□ -1.18
CCDC171-201ENST00000380701 GOLGA8SH3BPF8 625 aa7.69□□□□□ -1.18
CCDC171-201ENST00000380701 CTNND1O60716 968 aaKnown RBP7.69□□□□□ -1.18
CCDC171-201ENST00000380701 PCK1P35558 622 aa7.69□□□□□ -1.18
CCDC171-201ENST00000380701 EPHB4P54760 987 aa7.69□□□□□ -1.18
CCDC171-201ENST00000380701 TGFB2P61812 414 aa7.69□□□□□ -1.18
CCDC171-201ENST00000380701 PDIA5Q14554 519 aa7.69□□□□□ -1.18
CCDC171-201ENST00000380701 NXNQ6DKJ4 435 aa7.69□□□□□ -1.18
CCDC171-201ENST00000380701 CDKL3Q8IVW4 592 aaPredicted RBP7.69□□□□□ -1.18
CCDC171-201ENST00000380701 ZNF280CQ8ND82 737 aa7.69□□□□□ -1.18
CCDC171-201ENST00000380701 MRRFQ96E11 262 aaKnown RBP7.69□□□□□ -1.18
CCDC171-201ENST00000380701 TRIM15Q9C019 465 aa7.69□□□□□ -1.18
CCDC171-201ENST00000380701 DCCP43146 1447 aa7.68□□□□□ -1.18
CCDC171-201ENST00000380701 H3BRJ5 948 aa7.68□□□□□ -1.18
CCDC171-201ENST00000380701 ZNF197O14709 1029 aa7.68□□□□□ -1.18
CCDC171-201ENST00000380701 PLCG1P19174 1290 aa7.68□□□□□ -1.18
CCDC171-201ENST00000380701 SOX5P35711 763 aa7.68□□□□□ -1.18
CCDC171-201ENST00000380701 ANKRD20A4Q4UJ75 823 aa7.68□□□□□ -1.18
CCDC171-201ENST00000380701 GLE1Q53GS7 698 aaKnown RBP7.68□□□□□ -1.18
CCDC171-201ENST00000380701 ANKRD20A8PQ5CZ79 823 aa7.68□□□□□ -1.18
CCDC171-201ENST00000380701 EFHC2Q5JST6 749 aa7.68□□□□□ -1.18
CCDC171-201ENST00000380701 ANKRD20A2Q5SQ80 823 aa7.68□□□□□ -1.18
CCDC171-201ENST00000380701 ANKRD20A1Q5TYW2 823 aa7.68□□□□□ -1.18
CCDC171-201ENST00000380701 ATG16L1Q676U5 607 aa7.68□□□□□ -1.18
CCDC171-201ENST00000380701 ARHGAP18Q8N392 663 aa7.68□□□□□ -1.18
CCDC171-201ENST00000380701 FOPNLQ96NB1 174 aa7.68□□□□□ -1.18
CCDC171-201ENST00000380701 PANX2Q96RD6 677 aa7.68□□□□□ -1.18
CCDC171-201ENST00000380701 PUS7LQ9H0K6 701 aaKnown RBP7.68□□□□□ -1.18
CCDC171-201ENST00000380701 NDST4Q9H3R1 872 aa7.68□□□□□ -1.18
CCDC171-201ENST00000380701 FANCLQ9NW38 375 aa7.68□□□□□ -1.18
CCDC171-201ENST00000380701 SPATA31A1Q5TZJ5 1347 aa7.68□□□□□ -1.18
CCDC171-201ENST00000380701 IQGAP3Q86VI3 1631 aa7.68□□□□□ -1.18
CCDC171-201ENST00000380701 LRRD1A4D1F6 860 aa7.68□□□□□ -1.18
CCDC171-201ENST00000380701 SPDYE2BA6NHP3 402 aa7.68□□□□□ -1.18
CCDC171-201ENST00000380701 STK25O00506 426 aa7.68□□□□□ -1.18
CCDC171-201ENST00000380701 GFPT2O94808 682 aa7.68□□□□□ -1.18
CCDC171-201ENST00000380701 SPDYE6P0CI01 402 aa7.68□□□□□ -1.18
CCDC171-201ENST00000380701 MTA1Q13330 715 aa7.68□□□□□ -1.18
CCDC171-201ENST00000380701 TTC31Q49AM3 519 aaPredicted RBP7.68□□□□□ -1.18
CCDC171-201ENST00000380701 RABGGTAQ92696 567 aa7.68□□□□□ -1.18
CCDC171-201ENST00000380701 CDC23Q9UJX2 597 aa7.68□□□□□ -1.18
CCDC171-201ENST00000380701 SYNJ2BP-COX16A0A087WUM0 186 aa7.68□□□□□ -1.18
CCDC171-201ENST00000380701 SUN1O94901 812 aa7.68□□□□□ -1.18
CCDC171-201ENST00000380701 DDIT3P35638 169 aa7.68□□□□□ -1.18
CCDC171-201ENST00000380701 CPT1AP50416 773 aa7.68□□□□□ -1.18
CCDC171-201ENST00000380701 NDUFA8P51970 172 aa7.68□□□□□ -1.18
CCDC171-201ENST00000380701 PEX3P56589 373 aa7.68□□□□□ -1.18
CCDC171-201ENST00000380701 ST8SIA6P61647 398 aa7.68□□□□□ -1.18
CCDC171-201ENST00000380701 RSBN1LQ6PCB5 846 aaPredicted RBP7.68□□□□□ -1.18
CCDC171-201ENST00000380701 RNF180Q86T96 592 aa7.68□□□□□ -1.18
CCDC171-201ENST00000380701 MICALL2Q8IY33 904 aa7.68□□□□□ -1.18
CCDC171-201ENST00000380701 WHAMMQ8TF30 809 aa7.68□□□□□ -1.18
CCDC171-201ENST00000380701 SCFD2Q8WU76 684 aa7.68□□□□□ -1.18
CCDC171-201ENST00000380701 SEPT1Q8WYJ6 367 aa7.68□□□□□ -1.18
CCDC171-201ENST00000380701 N4BP2L2Q92802 583 aaPredicted RBP7.68□□□□□ -1.18
CCDC171-201ENST00000380701 PGBD1Q96JS3 809 aa7.68□□□□□ -1.18
CCDC171-201ENST00000380701 NUDT12Q9BQG2 462 aa7.68□□□□□ -1.18
CCDC171-201ENST00000380701 COX16Q9P0S2 106 aa7.68□□□□□ -1.18
CCDC171-201ENST00000380701 CEP72Q9P209 647 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms