RNA–Protein interactions for RNA: ENST00000380265.9

HERC6-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HERC6, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-203ENST00000380265 TJP1Q07157 1748 aa13.17□□□□□ -0.3
HERC6-203ENST00000380265 LRRD1A4D1F6 860 aa13.17□□□□□ -0.3
HERC6-203ENST00000380265 SLC37A4O43826 429 aa13.17□□□□□ -0.3
HERC6-203ENST00000380265 SMNDC1O75940 238 aaKnown RBP eCLIP13.17□□□□□ -0.3
HERC6-203ENST00000380265 AGTP01019 485 aa13.17□□□□□ -0.3
HERC6-203ENST00000380265 XRCC5P13010 732 aaKnown RBP13.17□□□□□ -0.3
HERC6-203ENST00000380265 STX2P32856 288 aa13.17□□□□□ -0.3
HERC6-203ENST00000380265 LRRC57Q8N9N7 239 aa13.17□□□□□ -0.3
HERC6-203ENST00000380265 COA7Q96BR5 231 aa13.17□□□□□ -0.3
HERC6-203ENST00000380265 NAP1L3Q99457 506 aaPredicted RBP13.17□□□□□ -0.3
HERC6-203ENST00000380265 TAOK3Q9H2K8 898 aa13.17□□□□□ -0.3
HERC6-203ENST00000380265 ARHGEF10LQ9HCE6 1279 aa13.17□□□□□ -0.3
HERC6-203ENST00000380265 IL17RBQ9NRM6 502 aa13.17□□□□□ -0.3
HERC6-203ENST00000380265 TBK1Q9UHD2 729 aa13.17□□□□□ -0.3
HERC6-203ENST00000380265 KIAA1024Q9UPX6 916 aa13.17□□□□□ -0.3
HERC6-203ENST00000380265 PCDHB13Q9Y5F0 798 aa13.17□□□□□ -0.3
HERC6-203ENST00000380265 BZW2Q9Y6E2 419 aaKnown RBP13.17□□□□□ -0.3
HERC6-203ENST00000380265 MYH7BA7E2Y1 1941 aa13.16□□□□□ -0.3
HERC6-203ENST00000380265 PSMD2Q13200 908 aa13.16□□□□□ -0.3
HERC6-203ENST00000380265 BARGINQ6ZT62 677 aa13.16□□□□□ -0.3
HERC6-203ENST00000380265 DGKHQ86XP1 1220 aa13.16□□□□□ -0.3
HERC6-203ENST00000380265 GLYCTKQ8IVS8 523 aa13.16□□□□□ -0.3
HERC6-203ENST00000380265 TRIM59Q8IWR1 403 aa13.16□□□□□ -0.3
HERC6-203ENST00000380265 ARHGEF2Q92974 986 aaKnown RBP13.16□□□□□ -0.3
HERC6-203ENST00000380265 NAF1Q96HR8 494 aaKnown RBP13.16□□□□□ -0.3
HERC6-203ENST00000380265 ZFATQ9P243 1243 aa13.16□□□□□ -0.3
HERC6-203ENST00000380265 SUCLA2Q9P2R7 463 aaPredicted RBP13.16□□□□□ -0.3
HERC6-203ENST00000380265 CES2O00748 559 aa13.16□□□□□ -0.3
HERC6-203ENST00000380265 RAD23BP54727 409 aa13.16□□□□□ -0.3
HERC6-203ENST00000380265 UBAP2Q5T6F2 1119 aaKnown RBP13.16□□□□□ -0.3
HERC6-203ENST00000380265 AADACL2Q6P093 401 aa13.16□□□□□ -0.3
HERC6-203ENST00000380265 SLC30A9Q6PML9 568 aa13.16□□□□□ -0.3
HERC6-203ENST00000380265 SPATA21Q7Z572 469 aa13.16□□□□□ -0.3
HERC6-203ENST00000380265 NT5DC3Q86UY8 548 aa13.16□□□□□ -0.3
HERC6-203ENST00000380265 C18orf8Q96DM3 657 aa13.16□□□□□ -0.3
HERC6-203ENST00000380265 TMEM47Q9BQJ4 181 aa13.16□□□□□ -0.3
HERC6-203ENST00000380265 DDX23Q9BUQ8 820 aaKnown RBP13.16□□□□□ -0.3
HERC6-203ENST00000380265 TMEM120BA0PK00 339 aa13.16□□□□□ -0.3
HERC6-203ENST00000380265 FOXO6A8MYZ6 492 aa13.16□□□□□ -0.3
HERC6-203ENST00000380265 SNUPNO95149 360 aaKnown RBP13.16□□□□□ -0.3
HERC6-203ENST00000380265 ACSBG1Q96GR2 724 aa13.16□□□□□ -0.3
HERC6-203ENST00000380265 CEP63Q96MT8 703 aa13.16□□□□□ -0.3
HERC6-203ENST00000380265 ATP8A2Q9NTI2 1148 aa13.16□□□□□ -0.3
HERC6-203ENST00000380265 SLC5A4Q9NY91 659 aa13.16□□□□□ -0.3
HERC6-203ENST00000380265 PPP1R9AQ9ULJ8 1098 aa13.16□□□□□ -0.3
HERC6-203ENST00000380265 CHD4Q14839 1912 aa13.15□□□□□ -0.3
HERC6-203ENST00000380265 AFPP02771 609 aaKnown RBP13.15□□□□□ -0.3
HERC6-203ENST00000380265 ZNF131P52739 623 aa13.15□□□□□ -0.3
HERC6-203ENST00000380265 BICDL1Q6ZP65 573 aa13.15□□□□□ -0.3
HERC6-203ENST00000380265 GBP7Q8N8V2 638 aaPredicted RBP13.15□□□□□ -0.3
HERC6-203ENST00000380265 SLC35G2Q8TBE7 412 aa13.15□□□□□ -0.3
HERC6-203ENST00000380265 PGM2Q96G03 612 aa13.15□□□□□ -0.3
HERC6-203ENST00000380265 ERVK-5Q9HDB9 667 aa13.15□□□□□ -0.3
HERC6-203ENST00000380265 M0R2N6 131 aa13.15□□□□□ -0.3
HERC6-203ENST00000380265 STAT1P42224 750 aa13.15□□□□□ -0.3
HERC6-203ENST00000380265 CALCOCO2Q13137 446 aa13.15□□□□□ -0.3
HERC6-203ENST00000380265 SEPT2Q15019 361 aa13.15□□□□□ -0.3
HERC6-203ENST00000380265 SLC35G1Q2M3R5 365 aa13.15□□□□□ -0.3
HERC6-203ENST00000380265 IRF2BP2Q7Z5L9 587 aa13.15□□□□□ -0.3
HERC6-203ENST00000380265 GANQ9H2C0 597 aa13.15□□□□□ -0.3
HERC6-203ENST00000380265 GCNT4Q9P109 453 aa13.15□□□□□ -0.3
HERC6-203ENST00000380265 CORO1CQ9ULV4 474 aaPredicted RBP13.15□□□□□ -0.3
HERC6-203ENST00000380265 RTCBQ9Y3I0 505 aaKnown RBP13.15□□□□□ -0.3
HERC6-203ENST00000380265 FRMPD2Q68DX3 1309 aaPredicted RBP13.15□□□□□ -0.3
HERC6-203ENST00000380265 CNGA2Q16280 664 aa13.15□□□□□ -0.31
HERC6-203ENST00000380265 ZNF449Q6P9G9 518 aa13.15□□□□□ -0.31
HERC6-203ENST00000380265 DAGLBQ8NCG7 672 aa13.15□□□□□ -0.31
HERC6-203ENST00000380265 ATP8B4Q8TF62 1192 aa13.15□□□□□ -0.31
HERC6-203ENST00000380265 ARL2BPQ9Y2Y0 163 aa13.15□□□□□ -0.31
HERC6-203ENST00000380265 CLIC2O15247 247 aa13.14□□□□□ -0.31
HERC6-203ENST00000380265 GNAT1P11488 350 aa13.14□□□□□ -0.31
HERC6-203ENST00000380265 RWDD2BP57060 319 aa13.14□□□□□ -0.31
HERC6-203ENST00000380265 SETDB1Q15047 1291 aa13.14□□□□□ -0.31
HERC6-203ENST00000380265 CCDC6Q16204 474 aa13.14□□□□□ -0.31
HERC6-203ENST00000380265 ARHGAP44Q17R89 818 aa13.14□□□□□ -0.31
HERC6-203ENST00000380265 NSUN4Q96CB9 384 aaKnown RBP13.14□□□□□ -0.31
HERC6-203ENST00000380265 ADAM22Q9P0K1 906 aa13.14□□□□□ -0.31
HERC6-203ENST00000380265 CTTNBP2NLQ9P2B4 639 aa13.14□□□□□ -0.31
HERC6-203ENST00000380265 ADAMTS2O95450 1211 aa13.14□□□□□ -0.31
HERC6-203ENST00000380265 CREB1P16220 341 aa13.14□□□□□ -0.31
HERC6-203ENST00000380265 RNASELQ05823 741 aaKnown RBP13.14□□□□□ -0.31
HERC6-203ENST00000380265 TGS1Q96RS0 853 aaKnown RBP13.14□□□□□ -0.31
HERC6-203ENST00000380265 ADAM7Q9H2U9 754 aa13.14□□□□□ -0.31
HERC6-203ENST00000380265 ETAA1Q9NY74 926 aa13.14□□□□□ -0.31
HERC6-203ENST00000380265 NKIRAS1Q9NYS0 192 aa13.14□□□□□ -0.31
HERC6-203ENST00000380265 CHORDC1Q9UHD1 332 aaPredicted RBP13.14□□□□□ -0.31
HERC6-203ENST00000380265 USP54Q70EL1 1684 aa13.14□□□□□ -0.31
HERC6-203ENST00000380265 PTENP60484 403 aa13.14□□□□□ -0.31
HERC6-203ENST00000380265 BLMHQ13867 455 aa13.14□□□□□ -0.31
HERC6-203ENST00000380265 UBE2SQ16763 222 aa13.14□□□□□ -0.31
HERC6-203ENST00000380265 COBLL1Q53SF7 1204 aa13.14□□□□□ -0.31
HERC6-203ENST00000380265 CDCA2Q69YH5 1023 aaPredicted RBP13.14□□□□□ -0.31
HERC6-203ENST00000380265 COL23A1Q86Y22 540 aaPredicted RBP13.14□□□□□ -0.31
HERC6-203ENST00000380265 RAB3IPQ96QF0 476 aaPredicted RBP13.14□□□□□ -0.31
HERC6-203ENST00000380265 IRAK4Q9NWZ3 460 aa13.14□□□□□ -0.31
HERC6-203ENST00000380265 PCDHA12Q9UN75 941 aa13.14□□□□□ -0.31
HERC6-203ENST00000380265 ATP4AP20648 1035 aa13.13□□□□□ -0.31
HERC6-203ENST00000380265 TNFAIP3P21580 790 aa13.13□□□□□ -0.31
HERC6-203ENST00000380265 KCNJ1P48048 391 aa13.13□□□□□ -0.31
HERC6-203ENST00000380265 VPS41P49754 854 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms