RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 SECISBP2LQ93073 1101 aaKnown RBP11.5□□□□□ -0.57
POLR2J3-201ENST00000379340 RPGRIP1Q96KN7 1286 aa11.5□□□□□ -0.57
POLR2J3-201ENST00000379340 COL20A1Q9P218 1284 aa11.5□□□□□ -0.57
POLR2J3-201ENST00000379340 DDX41Q9UJV9 622 aaKnown RBP11.5□□□□□ -0.57
POLR2J3-201ENST00000379340 MYPNQ86TC9 1320 aa11.49□□□□□ -0.57
POLR2J3-201ENST00000379340 VWA5AO00534 786 aa11.49□□□□□ -0.57
POLR2J3-201ENST00000379340 MAFGO15525 162 aa11.49□□□□□ -0.57
POLR2J3-201ENST00000379340 DHX15O43143 795 aaKnown RBP11.49□□□□□ -0.57
POLR2J3-201ENST00000379340 TACC1O75410 805 aa11.49□□□□□ -0.57
POLR2J3-201ENST00000379340 NOL4O94818 638 aa11.49□□□□□ -0.57
POLR2J3-201ENST00000379340 TBC1D8O95759 1140 aa11.49□□□□□ -0.57
POLR2J3-201ENST00000379340 PTPRAP18433 802 aa11.49□□□□□ -0.57
POLR2J3-201ENST00000379340 ANXA13P27216 316 aa11.49□□□□□ -0.57
POLR2J3-201ENST00000379340 SFNP31947 248 aa11.49□□□□□ -0.57
POLR2J3-201ENST00000379340 PSMC2P35998 433 aaKnown RBP11.49□□□□□ -0.57
POLR2J3-201ENST00000379340 RPS6P62753 249 aaKnown RBP11.49□□□□□ -0.57
POLR2J3-201ENST00000379340 KRT76Q01546 638 aa11.49□□□□□ -0.57
POLR2J3-201ENST00000379340 CKAP4Q07065 602 aaKnown RBP11.49□□□□□ -0.57
POLR2J3-201ENST00000379340 SPP2Q13103 211 aa11.49□□□□□ -0.57
POLR2J3-201ENST00000379340 MTMR1Q13613 665 aa11.49□□□□□ -0.57
POLR2J3-201ENST00000379340 PGM5Q15124 567 aa11.49□□□□□ -0.57
POLR2J3-201ENST00000379340 MUM1L1Q5H9M0 696 aa11.49□□□□□ -0.57
POLR2J3-201ENST00000379340 HABP4Q5JVS0 413 aaKnown RBP11.49□□□□□ -0.57
POLR2J3-201ENST00000379340 TEX35Q5T0J7 233 aa11.49□□□□□ -0.57
POLR2J3-201ENST00000379340 PAPD7Q5XG87 772 aaKnown RBP11.49□□□□□ -0.57
POLR2J3-201ENST00000379340 RNF207Q6ZRF8 634 aa11.49□□□□□ -0.57
POLR2J3-201ENST00000379340 MOB2Q70IA6 237 aa11.49□□□□□ -0.57
POLR2J3-201ENST00000379340 ZNF720Q7Z2F6 126 aa11.49□□□□□ -0.57
POLR2J3-201ENST00000379340 TRAPPC11Q7Z392 1133 aa11.49□□□□□ -0.57
POLR2J3-201ENST00000379340 FAM178BQ8IXR5 827 aa11.49□□□□□ -0.57
POLR2J3-201ENST00000379340 SLC17A8Q8NDX2 589 aa11.49□□□□□ -0.57
POLR2J3-201ENST00000379340 ZNF296Q8WUU4 475 aaPredicted RBP11.49□□□□□ -0.57
POLR2J3-201ENST00000379340 TRERF1Q96PN7 1200 aa11.49□□□□□ -0.57
POLR2J3-201ENST00000379340 IFIH1Q9BYX4 1025 aaKnown RBP11.49□□□□□ -0.57
POLR2J3-201ENST00000379340 GANQ9H2C0 597 aa11.49□□□□□ -0.57
POLR2J3-201ENST00000379340 PCDHA13Q9Y5I0 950 aa11.49□□□□□ -0.57
POLR2J3-201ENST00000379340 RLFQ13129 1914 aa11.48□□□□□ -0.57
POLR2J3-201ENST00000379340 ATP8B3O60423 1300 aa11.48□□□□□ -0.57
POLR2J3-201ENST00000379340 CTAGE15A4D2H0 777 aa11.48□□□□□ -0.57
POLR2J3-201ENST00000379340 ATP2A1O14983 1001 aa11.48□□□□□ -0.57
POLR2J3-201ENST00000379340 ABL1P00519 1130 aa11.48□□□□□ -0.57
POLR2J3-201ENST00000379340 CTAGE8P0CG41 777 aa11.48□□□□□ -0.57
POLR2J3-201ENST00000379340 DSG3P32926 999 aa11.48□□□□□ -0.57
POLR2J3-201ENST00000379340 QARSP47897 775 aaKnown RBP11.48□□□□□ -0.57
POLR2J3-201ENST00000379340 SNRPFP62306 86 aaKnown RBP11.48□□□□□ -0.57
POLR2J3-201ENST00000379340 MRPS9P82933 396 aaKnown RBP11.48□□□□□ -0.57
POLR2J3-201ENST00000379340 BMS1Q14692 1282 aaKnown RBP11.48□□□□□ -0.57
POLR2J3-201ENST00000379340 ASTE1Q2TB18 679 aaPredicted RBP11.48□□□□□ -0.57
POLR2J3-201ENST00000379340 HGSNATQ68CP4 663 aa11.48□□□□□ -0.57
POLR2J3-201ENST00000379340 TMCO3Q6UWJ1 677 aa11.48□□□□□ -0.57
POLR2J3-201ENST00000379340 GBP6Q6ZN66 633 aa11.48□□□□□ -0.57
POLR2J3-201ENST00000379340 CTAGE6Q86UF2 777 aa11.48□□□□□ -0.57
POLR2J3-201ENST00000379340 NLRX1Q86UT6 975 aa11.48□□□□□ -0.57
POLR2J3-201ENST00000379340 SLC9A9Q8IVB4 645 aa11.48□□□□□ -0.57
POLR2J3-201ENST00000379340 FMNL3Q8IVF7 1028 aa11.48□□□□□ -0.57
POLR2J3-201ENST00000379340 CTAGE4Q8IX94 777 aa11.48□□□□□ -0.57
POLR2J3-201ENST00000379340 TMEM174Q8WUU8 243 aa11.48□□□□□ -0.57
POLR2J3-201ENST00000379340 GPRASP2Q96D09 838 aa11.48□□□□□ -0.57
POLR2J3-201ENST00000379340 CDCA5Q96FF9 252 aa11.48□□□□□ -0.57
POLR2J3-201ENST00000379340 ALS2CR12Q96Q35 445 aa11.48□□□□□ -0.57
POLR2J3-201ENST00000379340 WRNIP1Q96S55 665 aa11.48□□□□□ -0.57
POLR2J3-201ENST00000379340 FIZ1Q96SL8 496 aa11.48□□□□□ -0.57
POLR2J3-201ENST00000379340 PDCD2LQ9BRP1 358 aa11.48□□□□□ -0.57
POLR2J3-201ENST00000379340 PXMP2Q9NR77 195 aa11.48□□□□□ -0.57
POLR2J3-201ENST00000379340 RNF146Q9NTX7 359 aa11.48□□□□□ -0.57
POLR2J3-201ENST00000379340 AIPL1Q9NZN9 384 aa11.48□□□□□ -0.57
POLR2J3-201ENST00000379340 LARSQ9P2J5 1176 aaKnown RBP11.48□□□□□ -0.57
POLR2J3-201ENST00000379340 ADAMTS5Q9UNA0 930 aa11.48□□□□□ -0.57
POLR2J3-201ENST00000379340 BZW2Q9Y6E2 419 aaKnown RBP11.48□□□□□ -0.57
POLR2J3-201ENST00000379340 LOC285556D6RIA3 1793 aa11.48□□□□□ -0.57
POLR2J3-201ENST00000379340 ZMYM2Q9UBW7 1377 aa11.48□□□□□ -0.57
POLR2J3-201ENST00000379340 COL11A1P12107 1806 aaPredicted RBP11.48□□□□□ -0.57
POLR2J3-201ENST00000379340 ZNF263O14978 683 aa11.47□□□□□ -0.57
POLR2J3-201ENST00000379340 TGFB1I1O43294 461 aa11.47□□□□□ -0.57
POLR2J3-201ENST00000379340 DKC1O60832 514 aaKnown RBP eCLIP11.47□□□□□ -0.57
POLR2J3-201ENST00000379340 STAM2O75886 525 aa11.47□□□□□ -0.57
POLR2J3-201ENST00000379340 AKAP3O75969 853 aa11.47□□□□□ -0.57
POLR2J3-201ENST00000379340 CCND2P30279 289 aa11.47□□□□□ -0.57
POLR2J3-201ENST00000379340 MAGEA1P43355 309 aa11.47□□□□□ -0.57
POLR2J3-201ENST00000379340 CLCN6P51797 869 aa11.47□□□□□ -0.57
POLR2J3-201ENST00000379340 POLR2FP61218 127 aaKnown RBP11.47□□□□□ -0.57
POLR2J3-201ENST00000379340 BRD3Q15059 726 aa11.47□□□□□ -0.57
POLR2J3-201ENST00000379340 PPP2R5AQ15172 486 aa11.47□□□□□ -0.57
POLR2J3-201ENST00000379340 ASIC2Q16515 512 aa11.47□□□□□ -0.57
POLR2J3-201ENST00000379340 EXOC3L4Q17RC7 722 aa11.47□□□□□ -0.57
POLR2J3-201ENST00000379340 TDRD12Q587J7 1177 aaKnown RBP11.47□□□□□ -0.57
POLR2J3-201ENST00000379340 ODR4Q5SWX8 454 aa11.47□□□□□ -0.57
POLR2J3-201ENST00000379340 C10orf76Q5T2E6 689 aa11.47□□□□□ -0.57
POLR2J3-201ENST00000379340 ANGEL2Q5VTE6 544 aaKnown RBP11.47□□□□□ -0.57
POLR2J3-201ENST00000379340 ARHGEF16Q5VV41 709 aa11.47□□□□□ -0.57
POLR2J3-201ENST00000379340 PADI6Q6TGC4 694 aa11.47□□□□□ -0.57
POLR2J3-201ENST00000379340 C4orf19Q8IY42 314 aa11.47□□□□□ -0.57
POLR2J3-201ENST00000379340 RNF10Q8N5U6 811 aaKnown RBP11.47□□□□□ -0.57
POLR2J3-201ENST00000379340 CCDC155Q8N6L0 562 aa11.47□□□□□ -0.57
POLR2J3-201ENST00000379340 BANK1Q8NDB2 785 aa11.47□□□□□ -0.57
POLR2J3-201ENST00000379340 IL31RAQ8NI17 732 aa11.47□□□□□ -0.57
POLR2J3-201ENST00000379340 TAAR1Q96RJ0 339 aa11.47□□□□□ -0.57
POLR2J3-201ENST00000379340 RMDN3Q96TC7 470 aa11.47□□□□□ -0.57
POLR2J3-201ENST00000379340 SENP7Q9BQF6 1050 aa11.47□□□□□ -0.57
POLR2J3-201ENST00000379340 STRA6Q9BX79 667 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms