RNA–Protein interactions for RNA: ENST00000376490.7

CLCN6-203, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 963 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-203ENST00000376490 LINC01599Q8WXQ3 324 aa16.02■□□□□ 0.16
CLCN6-203ENST00000376490 TMX3Q96JJ7 454 aa16.02■□□□□ 0.16
CLCN6-203ENST00000376490 CEP89Q96ST8 783 aa16.02■□□□□ 0.16
CLCN6-203ENST00000376490 RGL1Q9NZL6 768 aa16.02■□□□□ 0.16
CLCN6-203ENST00000376490 WRAP73Q9P2S5 460 aaPredicted RBP16.02■□□□□ 0.16
CLCN6-203ENST00000376490 MTUS1Q9ULD2 1270 aa16.02■□□□□ 0.16
CLCN6-203ENST00000376490 PCDHA12Q9UN75 941 aa16.02■□□□□ 0.16
CLCN6-203ENST00000376490 AKT3Q9Y243 479 aa16.02■□□□□ 0.16
CLCN6-203ENST00000376490 FNDC1Q4ZHG4 1894 aaPredicted RBP16.01■□□□□ 0.15
CLCN6-203ENST00000376490 RPS6KA5O75582 802 aa16.01■□□□□ 0.15
CLCN6-203ENST00000376490 P4HBP07237 508 aaKnown RBP16.01■□□□□ 0.15
CLCN6-203ENST00000376490 TMOD1P28289 359 aa16.01■□□□□ 0.15
CLCN6-203ENST00000376490 TXKP42681 527 aa16.01■□□□□ 0.15
CLCN6-203ENST00000376490 CRYBB1P53674 252 aaPredicted RBP16.01■□□□□ 0.15
CLCN6-203ENST00000376490 NLRP11P59045 1033 aaKnown RBP16.01■□□□□ 0.15
CLCN6-203ENST00000376490 CCDC85BQ15834 202 aaPredicted RBP16.01■□□□□ 0.15
CLCN6-203ENST00000376490 ZNF579Q8NAF0 562 aaKnown RBP16.01■□□□□ 0.15
CLCN6-203ENST00000376490 DYDC2Q96IM9 177 aa16.01■□□□□ 0.15
CLCN6-203ENST00000376490 ZNF668Q96K58 619 aaPredicted RBP16.01■□□□□ 0.15
CLCN6-203ENST00000376490 YME1L1Q96TA2 773 aa16.01■□□□□ 0.15
CLCN6-203ENST00000376490 OSMRQ99650 979 aa16.01■□□□□ 0.15
CLCN6-203ENST00000376490 FOXP1Q9H334 677 aaPredicted RBP16.01■□□□□ 0.15
CLCN6-203ENST00000376490 TMX1Q9H3N1 280 aa16.01■□□□□ 0.15
CLCN6-203ENST00000376490 ERVK-5Q9HDB9 667 aa16.01■□□□□ 0.15
CLCN6-203ENST00000376490 ST3GAL5Q9UNP4 418 aa16.01■□□□□ 0.15
CLCN6-203ENST00000376490 KIAA1671Q9BY89 1806 aa16.01■□□□□ 0.15
CLCN6-203ENST00000376490 ZBTB39O15060 712 aa16■□□□□ 0.15
CLCN6-203ENST00000376490 NEMFO60524 1076 aa16■□□□□ 0.15
CLCN6-203ENST00000376490 MCM7P33993 719 aa16■□□□□ 0.15
CLCN6-203ENST00000376490 NPEPPSP55786 919 aa16■□□□□ 0.15
CLCN6-203ENST00000376490 ERVK-21P61565 698 aa16■□□□□ 0.15
CLCN6-203ENST00000376490 DRP2Q13474 957 aa16■□□□□ 0.15
CLCN6-203ENST00000376490 CTTNQ14247 550 aaKnown RBP16■□□□□ 0.15
CLCN6-203ENST00000376490 PLA2G4FQ68DD2 849 aa16■□□□□ 0.15
CLCN6-203ENST00000376490 SP7Q8TDD2 431 aaPredicted RBP16■□□□□ 0.15
CLCN6-203ENST00000376490 MTMR9Q96QG7 549 aa16■□□□□ 0.15
CLCN6-203ENST00000376490 TGS1Q96RS0 853 aaKnown RBP16■□□□□ 0.15
CLCN6-203ENST00000376490 MAP7D2Q96T17 732 aa16■□□□□ 0.15
CLCN6-203ENST00000376490 C17orf80Q9BSJ5 609 aa16■□□□□ 0.15
CLCN6-203ENST00000376490 FTHL17Q9BXU8 183 aa16■□□□□ 0.15
CLCN6-203ENST00000376490 TMEM60Q9H2L4 133 aa16■□□□□ 0.15
CLCN6-203ENST00000376490 ADAMTS10Q9H324 1103 aa16■□□□□ 0.15
CLCN6-203ENST00000376490 TTC12Q9H892 705 aaPredicted RBP16■□□□□ 0.15
CLCN6-203ENST00000376490 TRANK1O15050 2925 aa15.99■□□□□ 0.15
CLCN6-203ENST00000376490 IGKV6-21A0A0C4DH24 114 aa15.99■□□□□ 0.15
CLCN6-203ENST00000376490 MGEA5O60502 916 aa15.99■□□□□ 0.15
CLCN6-203ENST00000376490 SLITRK3O94933 977 aa15.99■□□□□ 0.15
CLCN6-203ENST00000376490 CYP4A11Q02928 519 aa15.99■□□□□ 0.15
CLCN6-203ENST00000376490 GRB10Q13322 594 aa15.99■□□□□ 0.15
CLCN6-203ENST00000376490 GNL2Q13823 731 aaKnown RBP15.99■□□□□ 0.15
CLCN6-203ENST00000376490 ZNF174Q15697 407 aa15.99■□□□□ 0.15
CLCN6-203ENST00000376490 TPH2Q8IWU9 490 aa15.99■□□□□ 0.15
CLCN6-203ENST00000376490 IL27Q8NEV9 243 aa15.99■□□□□ 0.15
CLCN6-203ENST00000376490 BACH2Q9BYV9 841 aa15.99■□□□□ 0.15
CLCN6-203ENST00000376490 TSPYL2Q9H2G4 693 aaPredicted RBP15.99■□□□□ 0.15
CLCN6-203ENST00000376490 MTCH2Q9Y6C9 303 aa15.99■□□□□ 0.15
CLCN6-203ENST00000376490 GPR182O15218 404 aa15.98■□□□□ 0.15
CLCN6-203ENST00000376490 LPXNO60711 386 aa15.98■□□□□ 0.15
CLCN6-203ENST00000376490 DKC1O60832 514 aaKnown RBP eCLIP15.98■□□□□ 0.156e-6■■■□□ 15
CLCN6-203ENST00000376490 MAFO75444 373 aaPredicted RBP15.98■□□□□ 0.15
CLCN6-203ENST00000376490 GPC3P51654 580 aa15.98■□□□□ 0.15
CLCN6-203ENST00000376490 FAM228AQ86W67 206 aa15.98■□□□□ 0.15
CLCN6-203ENST00000376490 NOSTRINQ8IVI9 506 aa15.98■□□□□ 0.15
CLCN6-203ENST00000376490 C4orf19Q8IY42 314 aa15.98■□□□□ 0.15
CLCN6-203ENST00000376490 CRIPAKQ8N1N5 446 aa15.98■□□□□ 0.15
CLCN6-203ENST00000376490 HSD17B14Q9BPX1 270 aa15.98■□□□□ 0.15
CLCN6-203ENST00000376490 EIF2AK1Q9BQI3 630 aaKnown RBP15.98■□□□□ 0.15
CLCN6-203ENST00000376490 LXNQ9BS40 222 aa15.98■□□□□ 0.15
CLCN6-203ENST00000376490 PRDM6Q9NQX0 595 aa15.98■□□□□ 0.15
CLCN6-203ENST00000376490 CYP26B1Q9NR63 512 aa15.98■□□□□ 0.15
CLCN6-203ENST00000376490 CSDE1O75534 798 aaKnown RBP15.97■□□□□ 0.15
CLCN6-203ENST00000376490 DGKIO75912 1065 aa15.97■□□□□ 0.15
CLCN6-203ENST00000376490 POU3F3P20264 500 aaPredicted RBP15.97■□□□□ 0.15
CLCN6-203ENST00000376490 IBSPP21815 317 aaPredicted RBP15.97■□□□□ 0.15
CLCN6-203ENST00000376490 EIF4BP23588 611 aaKnown RBP15.97■□□□□ 0.15
CLCN6-203ENST00000376490 U2AF2P26368 475 aaKnown RBP eCLIP15.97■□□□□ 0.156e-7■■□□□ 12.6
CLCN6-203ENST00000376490 MCM2P49736 904 aa15.97■□□□□ 0.15
CLCN6-203ENST00000376490 DNM2P50570 870 aa15.97■□□□□ 0.15
CLCN6-203ENST00000376490 ODR4Q5SWX8 454 aa15.97■□□□□ 0.15
CLCN6-203ENST00000376490 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.97■□□□□ 0.15
CLCN6-203ENST00000376490 MICALL1Q8N3F8 863 aa15.97■□□□□ 0.15
CLCN6-203ENST00000376490 GDPD5Q8WTR4 605 aa15.97■□□□□ 0.15
CLCN6-203ENST00000376490 ZNF689Q96CS4 500 aaPredicted RBP15.97■□□□□ 0.15
CLCN6-203ENST00000376490 CEP170P1Q96L14 293 aa15.97■□□□□ 0.15
CLCN6-203ENST00000376490 ADAM2Q99965 735 aa15.97■□□□□ 0.15
CLCN6-203ENST00000376490 ZSWIM4Q9H7M6 989 aa15.97■□□□□ 0.15
CLCN6-203ENST00000376490 RGS18Q9NS28 235 aa15.97■□□□□ 0.15
CLCN6-203ENST00000376490 SUCLA2Q9P2R7 463 aaPredicted RBP15.97■□□□□ 0.15
CLCN6-203ENST00000376490 COL4A6Q14031 1691 aa15.97■□□□□ 0.15
CLCN6-203ENST00000376490 ATG2AQ2TAZ0 1938 aa15.97■□□□□ 0.15
CLCN6-203ENST00000376490 A0A087WWV3 80 aa15.96■□□□□ 0.15
CLCN6-203ENST00000376490 DENND3A2RUS2 1198 aa15.96■□□□□ 0.15
CLCN6-203ENST00000376490 FGFR4P22455 802 aa15.96■□□□□ 0.15
CLCN6-203ENST00000376490 GJB2P29033 226 aa15.96■□□□□ 0.15
CLCN6-203ENST00000376490 YWHABP31946 246 aaKnown RBP15.96■□□□□ 0.15
CLCN6-203ENST00000376490 NBR1Q14596 966 aa15.96■□□□□ 0.15
CLCN6-203ENST00000376490 EPC2Q52LR7 807 aa15.96■□□□□ 0.15
CLCN6-203ENST00000376490 XKR9Q5GH70 373 aa15.96■□□□□ 0.15
CLCN6-203ENST00000376490 TTC38Q5R3I4 469 aa15.96■□□□□ 0.15
CLCN6-203ENST00000376490 OTUD6AQ7L8S5 288 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms